RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 QRICH2Q9H0J4 1663 aa24.08■■□□□ 1.44
TOM1-214ENST00000487670 MARCH10Q8NA82 808 aaPredicted RBP24.07■■□□□ 1.44
TOM1-214ENST00000487670 BCL11BQ9C0K0 894 aaPredicted RBP24.07■■□□□ 1.44
TOM1-214ENST00000487670 NHSQ6T4R5 1651 aa24.07■■□□□ 1.44
TOM1-214ENST00000487670 TUBGCP6Q96RT7 1819 aa24.07■■□□□ 1.44
TOM1-214ENST00000487670 KIAA1210Q9ULL0 1709 aa24.07■■□□□ 1.44
TOM1-214ENST00000487670 KAT6BQ8WYB5 2073 aa24.06■■□□□ 1.44
TOM1-214ENST00000487670 PLEKHG3A1L390 1219 aa24.06■■□□□ 1.44
TOM1-214ENST00000487670 SYT17Q9BSW7 474 aa24.05■■□□□ 1.44
TOM1-214ENST00000487670 BTAF1O14981 1849 aa24.05■■□□□ 1.44
TOM1-214ENST00000487670 PPIP5K1Q6PFW1 1433 aa24.04■■□□□ 1.44
TOM1-214ENST00000487670 DDB1Q16531 1140 aa24.04■■□□□ 1.44
TOM1-214ENST00000487670 CCDC61Q9Y6R9 512 aa24.04■■□□□ 1.44
TOM1-214ENST00000487670 SGIP1Q9BQI5 828 aa24.03■■□□□ 1.44
TOM1-214ENST00000487670 RAB3GAP2Q9H2M9 1393 aa24.03■■□□□ 1.44
TOM1-214ENST00000487670 C1QTNF8P60827 252 aa24.02■■□□□ 1.44
TOM1-214ENST00000487670 AXIN2Q9Y2T1 843 aa24.01■■□□□ 1.43
TOM1-214ENST00000487670 TXNRD1Q16881 649 aa24■■□□□ 1.43
TOM1-214ENST00000487670 NLRP13Q86W25 1043 aa24■■□□□ 1.43
TOM1-214ENST00000487670 SHANK3Q9BYB0 1731 aa24■■□□□ 1.43
TOM1-214ENST00000487670 AATKQ6ZMQ8 1374 aa24■■□□□ 1.43
TOM1-214ENST00000487670 COL24A1Q17RW2 1714 aa23.98■■□□□ 1.43
TOM1-214ENST00000487670 SLC15A2Q16348 729 aa23.98■■□□□ 1.43
TOM1-214ENST00000487670 TOM1L2Q6ZVM7 507 aa23.98■■□□□ 1.43
TOM1-214ENST00000487670 BCL9O00512 1426 aa23.98■■□□□ 1.43
TOM1-214ENST00000487670 USP6P35125 1406 aa23.97■■□□□ 1.43
TOM1-214ENST00000487670 TRPM1Q7Z4N2 1603 aa23.97■■□□□ 1.43
TOM1-214ENST00000487670 QSER1Q2KHR3 1735 aa23.96■■□□□ 1.43
TOM1-214ENST00000487670 CABP2Q9NPB3 220 aa23.96■■□□□ 1.43
TOM1-214ENST00000487670 STK32BQ9NY57 414 aa23.96■■□□□ 1.43
TOM1-214ENST00000487670 CPSF1Q10570 1443 aaKnown RBP23.95■■□□□ 1.42
TOM1-214ENST00000487670 C11orf95C9JLR9 678 aaPredicted RBP23.95■■□□□ 1.42
TOM1-214ENST00000487670 WDR17Q8IZU2 1322 aa23.94■■□□□ 1.42
TOM1-214ENST00000487670 MTFR1LQ9H019 292 aa23.93■■□□□ 1.42
TOM1-214ENST00000487670 LTN1O94822 1766 aa23.93■■□□□ 1.42
TOM1-214ENST00000487670 NLRP6P59044 892 aa23.92■■□□□ 1.42
TOM1-214ENST00000487670 NBPF1Q3BBV0 1214 aa23.92■■□□□ 1.42
TOM1-214ENST00000487670 NFAT5O94916 1531 aa23.91■■□□□ 1.42
TOM1-214ENST00000487670 SRPK2P78362 688 aaKnown RBP23.91■■□□□ 1.42
TOM1-214ENST00000487670 TNS2Q63HR2 1409 aa23.91■■□□□ 1.42
TOM1-214ENST00000487670 IFFO2Q5TF58 517 aa23.9■■□□□ 1.42
TOM1-214ENST00000487670 ZNF827Q17R98 1081 aa23.89■■□□□ 1.41
TOM1-214ENST00000487670 ACSBG1Q96GR2 724 aa23.88■■□□□ 1.41
TOM1-214ENST00000487670 ARXQ96QS3 562 aa23.88■■□□□ 1.41
TOM1-214ENST00000487670 ABCC6O95255 1503 aa23.88■■□□□ 1.41
TOM1-214ENST00000487670 SOX12O15370 315 aa23.87■■□□□ 1.41
TOM1-214ENST00000487670 CABP1Q9NZU7 370 aa23.86■■□□□ 1.41
TOM1-214ENST00000487670 MAP3K5Q99683 1374 aa23.86■■□□□ 1.41
TOM1-214ENST00000487670 MON2Q7Z3U7 1717 aa23.84■■□□□ 1.41
TOM1-214ENST00000487670 ARHGEF25Q86VW2 580 aa23.84■■□□□ 1.41
TOM1-214ENST00000487670 BRD4O60885 1362 aaPredicted RBP23.83■■□□□ 1.41
TOM1-214ENST00000487670 CARD10Q9BWT7 1032 aa23.83■■□□□ 1.41
TOM1-214ENST00000487670 LRRC4BQ9NT99 713 aa23.82■■□□□ 1.4
TOM1-214ENST00000487670 CENPJQ9HC77 1338 aaPredicted RBP23.82■■□□□ 1.4
TOM1-214ENST00000487670 STAC3Q96MF2 364 aa23.81■■□□□ 1.4
TOM1-214ENST00000487670 DOT1LQ8TEK3 1739 aa23.81■■□□□ 1.4
TOM1-214ENST00000487670 USP54Q70EL1 1684 aa23.8■■□□□ 1.4
TOM1-214ENST00000487670 LY75O60449 1722 aa23.8■■□□□ 1.4
TOM1-214ENST00000487670 GIGYF1O75420 1035 aaPredicted RBP23.8■■□□□ 1.4
TOM1-214ENST00000487670 CSB-PGBD3P0DP91 1061 aa23.8■■□□□ 1.4
TOM1-214ENST00000487670 GPR162Q16538 588 aa23.8■■□□□ 1.4
TOM1-214ENST00000487670 CDCA7Q9BWT1 371 aaPredicted RBP23.8■■□□□ 1.4
TOM1-214ENST00000487670 EXOC5O00471 708 aa23.79■■□□□ 1.4
TOM1-214ENST00000487670 KLHL34Q8N239 644 aa23.79■■□□□ 1.4
TOM1-214ENST00000487670 RGPD2P0DJD1 1756 aa23.78■■□□□ 1.4
TOM1-214ENST00000487670 NLGN2Q8NFZ4 835 aa23.78■■□□□ 1.4
TOM1-214ENST00000487670 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
TOM1-214ENST00000487670 TTC21BQ7Z4L5 1316 aa23.76■■□□□ 1.39
TOM1-214ENST00000487670 CCDC7Q96M83 1385 aa23.76■■□□□ 1.39
TOM1-214ENST00000487670 KCNQ4P56696 695 aa23.73■■□□□ 1.39
TOM1-214ENST00000487670 AKT1S1Q96B36 256 aa23.72■■□□□ 1.39
TOM1-214ENST00000487670 PNPLA7Q6ZV29 1317 aa23.72■■□□□ 1.39
TOM1-214ENST00000487670 YBX3P16989 372 aaKnown RBP eCLIP23.71■■□□□ 1.39
TOM1-214ENST00000487670 ERBB3P21860 1342 aa23.67■■□□□ 1.38
TOM1-214ENST00000487670 KCNH5Q8NCM2 988 aa23.67■■□□□ 1.38
TOM1-214ENST00000487670 FAM208AQ9UK61 1670 aaKnown RBP23.66■■□□□ 1.38
TOM1-214ENST00000487670 TAF1LQ8IZX4 1826 aa23.66■■□□□ 1.38
TOM1-214ENST00000487670 ATP10DQ9P241 1426 aa23.65■■□□□ 1.38
TOM1-214ENST00000487670 NLRP2Q9NX02 1062 aa23.64■■□□□ 1.37
TOM1-214ENST00000487670 IL2RBP14784 551 aa23.63■■□□□ 1.37
TOM1-214ENST00000487670 C5P01031 1676 aa23.63■■□□□ 1.37
TOM1-214ENST00000487670 TTC21AQ8NDW8 1320 aa23.62■■□□□ 1.37
TOM1-214ENST00000487670 NSD2O96028 1365 aa23.62■■□□□ 1.37
TOM1-214ENST00000487670 KTN1Q86UP2 1357 aaKnown RBP23.62■■□□□ 1.37
TOM1-214ENST00000487670 CD163L1Q9NR16 1453 aa23.62■■□□□ 1.37
TOM1-214ENST00000487670 EVC2Q86UK5 1308 aa23.6■■□□□ 1.37
TOM1-214ENST00000487670 POLD1P28340 1107 aa23.6■■□□□ 1.37
TOM1-214ENST00000487670 NME9Q86XW9 330 aa23.59■■□□□ 1.37
TOM1-214ENST00000487670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.59■■□□□ 1.37
TOM1-214ENST00000487670 SLC16A10Q8TF71 515 aa23.59■■□□□ 1.37
TOM1-214ENST00000487670 ANKRD24Q8TF21 1146 aa23.58■■□□□ 1.37
TOM1-214ENST00000487670 TOGARAM1Q9Y4F4 1720 aa23.58■■□□□ 1.37
TOM1-214ENST00000487670 TFCP2L1Q9NZI6 479 aa23.57■■□□□ 1.36
TOM1-214ENST00000487670 USP31Q70CQ4 1352 aa23.56■■□□□ 1.36
TOM1-214ENST00000487670 MSL1Q68DK7 614 aa23.56■■□□□ 1.36
TOM1-214ENST00000487670 ZNF692Q9BU19 519 aaPredicted RBP23.56■■□□□ 1.36
TOM1-214ENST00000487670 DDX54Q8TDD1 881 aaKnown RBP23.55■■□□□ 1.36
TOM1-214ENST00000487670 ADCY9O60503 1353 aa23.54■■□□□ 1.36
TOM1-214ENST00000487670 SBNO2Q9Y2G9 1366 aa23.54■■□□□ 1.36
TOM1-214ENST00000487670 SLC27A3Q5K4L6 730 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms