RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 MINK1Q8N4C8 1332 aaPredicted RBP8.99□□□□□ -0.97
COL4A3-206ENST00000487633 ADCY9O60503 1353 aa8.99□□□□□ -0.97
COL4A3-206ENST00000487633 DHX57Q6P158 1386 aaKnown RBP8.99□□□□□ -0.97
COL4A3-206ENST00000487633 BTAF1O14981 1849 aa8.98□□□□□ -0.97
COL4A3-206ENST00000487633 LRRC4BQ9NT99 713 aa8.98□□□□□ -0.97
COL4A3-206ENST00000487633 KIF3CO14782 793 aa8.97□□□□□ -0.97
COL4A3-206ENST00000487633 PPARGC1BQ86YN6 1023 aaKnown RBP8.97□□□□□ -0.97
COL4A3-206ENST00000487633 NGDNQ8NEJ9 315 aaKnown RBP8.97□□□□□ -0.97
COL4A3-206ENST00000487633 C14orf93Q9H972 538 aaKnown RBP8.97□□□□□ -0.97
COL4A3-206ENST00000487633 NHSQ6T4R5 1651 aa8.97□□□□□ -0.97
COL4A3-206ENST00000487633 QSER1Q2KHR3 1735 aa8.97□□□□□ -0.97
COL4A3-206ENST00000487633 WDR90Q96KV7 1748 aa8.97□□□□□ -0.97
COL4A3-206ENST00000487633 CRB1P82279 1406 aa8.97□□□□□ -0.97
COL4A3-206ENST00000487633 KAT6BQ8WYB5 2073 aa8.96□□□□□ -0.97
COL4A3-206ENST00000487633 ADGRB1O14514 1584 aa8.96□□□□□ -0.97
COL4A3-206ENST00000487633 SLC34A2O95436 690 aa8.96□□□□□ -0.98
COL4A3-206ENST00000487633 KCNQ4P56696 695 aa8.96□□□□□ -0.98
COL4A3-206ENST00000487633 DDB1Q16531 1140 aa8.96□□□□□ -0.98
COL4A3-206ENST00000487633 ACSBG1Q96GR2 724 aa8.96□□□□□ -0.98
COL4A3-206ENST00000487633 GPBP1L1Q9HC44 474 aaPredicted RBP8.96□□□□□ -0.98
COL4A3-206ENST00000487633 ITSN1Q15811 1721 aa8.95□□□□□ -0.98
COL4A3-206ENST00000487633 WWC3Q9ULE0 1092 aa8.95□□□□□ -0.98
COL4A3-206ENST00000487633 AXIN2Q9Y2T1 843 aa8.95□□□□□ -0.98
COL4A3-206ENST00000487633 THRAP3Q9Y2W1 955 aaKnown RBP8.95□□□□□ -0.98
COL4A3-206ENST00000487633 CPDO75976 1380 aa8.95□□□□□ -0.98
COL4A3-206ENST00000487633 ZBTB7CA1YPR0 619 aa8.94□□□□□ -0.98
COL4A3-206ENST00000487633 WASLO00401 505 aaPredicted RBP8.94□□□□□ -0.98
COL4A3-206ENST00000487633 PRELPP51888 382 aa8.94□□□□□ -0.98
COL4A3-206ENST00000487633 POGKQ9P215 609 aa8.94□□□□□ -0.98
COL4A3-206ENST00000487633 TRAK1Q9UPV9 953 aa8.94□□□□□ -0.98
COL4A3-206ENST00000487633 USP19O94966 1318 aa8.94□□□□□ -0.98
COL4A3-206ENST00000487633 PNPLA7Q6ZV29 1317 aa8.94□□□□□ -0.98
COL4A3-206ENST00000487633 AATKQ6ZMQ8 1374 aa8.94□□□□□ -0.98
COL4A3-206ENST00000487633 ARHGEF28Q8N1W1 1705 aaKnown RBP8.94□□□□□ -0.98
COL4A3-206ENST00000487633 AKT1S1Q96B36 256 aa8.93□□□□□ -0.98
COL4A3-206ENST00000487633 ANKRD30BQ9BXX2 1392 aa8.93□□□□□ -0.98
COL4A3-206ENST00000487633 BCL9O00512 1426 aa8.93□□□□□ -0.98
COL4A3-206ENST00000487633 SLC4A1APQ9BWU0 796 aaKnown RBP8.92□□□□□ -0.98
COL4A3-206ENST00000487633 ACEP12821 1306 aa8.91□□□□□ -0.98
COL4A3-206ENST00000487633 GCP02774 474 aa8.91□□□□□ -0.98
COL4A3-206ENST00000487633 TNS4Q8IZW8 715 aa8.91□□□□□ -0.98
COL4A3-206ENST00000487633 NUDT16Q96DE0 195 aaKnown RBP8.91□□□□□ -0.98
COL4A3-206ENST00000487633 POLR3AO14802 1390 aaPredicted RBP8.9□□□□□ -0.98
COL4A3-206ENST00000487633 TOM1L2Q6ZVM7 507 aa8.9□□□□□ -0.98
COL4A3-206ENST00000487633 ABTB2Q8N961 1025 aa8.9□□□□□ -0.98
COL4A3-206ENST00000487633 MSL1Q68DK7 614 aa8.89□□□□□ -0.99
COL4A3-206ENST00000487633 SLIT3O75094 1523 aa8.89□□□□□ -0.99
COL4A3-206ENST00000487633 APLP1P51693 650 aa8.88□□□□□ -0.99
COL4A3-206ENST00000487633 LY75O60449 1722 aa8.88□□□□□ -0.99
COL4A3-206ENST00000487633 PIK3C2AO00443 1686 aa8.88□□□□□ -0.99
COL4A3-206ENST00000487633 C11orf95C9JLR9 678 aaPredicted RBP8.87□□□□□ -0.99
COL4A3-206ENST00000487633 GRIN3BO60391 1043 aa8.87□□□□□ -0.99
COL4A3-206ENST00000487633 JMYQ8N9B5 988 aa8.87□□□□□ -0.99
COL4A3-206ENST00000487633 USP6P35125 1406 aa8.87□□□□□ -0.99
COL4A3-206ENST00000487633 TRPM1Q7Z4N2 1603 aa8.87□□□□□ -0.99
COL4A3-206ENST00000487633 WDR17Q8IZU2 1322 aa8.86□□□□□ -0.99
COL4A3-206ENST00000487633 QRICH2Q9H0J4 1663 aa8.86□□□□□ -0.99
COL4A3-206ENST00000487633 POLD1P28340 1107 aa8.86□□□□□ -0.99
COL4A3-206ENST00000487633 COL23A1Q86Y22 540 aaPredicted RBP8.86□□□□□ -0.99
COL4A3-206ENST00000487633 KLRG1Q96E93 195 aa8.86□□□□□ -0.99
COL4A3-206ENST00000487633 CDK19Q9BWU1 502 aa8.86□□□□□ -0.99
COL4A3-206ENST00000487633 TNS2Q63HR2 1409 aa8.86□□□□□ -0.99
COL4A3-206ENST00000487633 SMIM5Q71RC9 77 aa8.85□□□□□ -0.99
COL4A3-206ENST00000487633 NMRK2Q9NPI5 230 aa8.85□□□□□ -0.99
COL4A3-206ENST00000487633 KIAA1551Q9HCM1 1747 aa8.85□□□□□ -0.99
COL4A3-206ENST00000487633 EXOC5O00471 708 aa8.84□□□□□ -0.99
COL4A3-206ENST00000487633 AMIGO3Q86WK7 504 aa8.84□□□□□ -0.99
COL4A3-206ENST00000487633 SLC16A10Q8TF71 515 aa8.84□□□□□ -0.99
COL4A3-206ENST00000487633 TOGARAM1Q9Y4F4 1720 aa8.84□□□□□ -0.99
COL4A3-206ENST00000487633 ABCC6O95255 1503 aa8.84□□□□□ -0.99
COL4A3-206ENST00000487633 BRD4O60885 1362 aaPredicted RBP8.84□□□□□ -0.99
COL4A3-206ENST00000487633 DOT1LQ8TEK3 1739 aa8.83□□□□□ -1
COL4A3-206ENST00000487633 PLEKHG3A1L390 1219 aa8.83□□□□□ -1
COL4A3-206ENST00000487633 NLRP13Q86W25 1043 aa8.83□□□□□ -1
COL4A3-206ENST00000487633 N4BP2Q86UW6 1770 aaPredicted RBP8.83□□□□□ -1
COL4A3-206ENST00000487633 EIF3AQ14152 1382 aaKnown RBP8.83□□□□□ -1
COL4A3-206ENST00000487633 USP54Q70EL1 1684 aa8.82□□□□□ -1
COL4A3-206ENST00000487633 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
COL4A3-206ENST00000487633 PPIP5K1Q6PFW1 1433 aa8.82□□□□□ -1
COL4A3-206ENST00000487633 SOX12O15370 315 aa8.82□□□□□ -1
COL4A3-206ENST00000487633 TOMM70O94826 608 aa8.82□□□□□ -1
COL4A3-206ENST00000487633 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
COL4A3-206ENST00000487633 TFCP2L1Q9NZI6 479 aa8.82□□□□□ -1
COL4A3-206ENST00000487633 CICQ96RK0 1608 aaPredicted RBP8.82□□□□□ -1
COL4A3-206ENST00000487633 NSD2O96028 1365 aa8.82□□□□□ -1
COL4A3-206ENST00000487633 TAF1LQ8IZX4 1826 aa8.82□□□□□ -1
COL4A3-206ENST00000487633 ERBB3P21860 1342 aa8.81□□□□□ -1
COL4A3-206ENST00000487633 ARHGEF25Q86VW2 580 aa8.81□□□□□ -1
COL4A3-206ENST00000487633 MPHOSPH9Q99550 1183 aa8.81□□□□□ -1
COL4A3-206ENST00000487633 IGSF1Q8N6C5 1336 aa8.8□□□□□ -1
COL4A3-206ENST00000487633 HSPA1AP0DMV8 641 aaKnown RBP8.8□□□□□ -1
COL4A3-206ENST00000487633 HSPA1BP0DMV9 641 aaKnown RBP8.8□□□□□ -1
COL4A3-206ENST00000487633 NLRP6P59044 892 aa8.8□□□□□ -1
COL4A3-206ENST00000487633 CCDC61Q9Y6R9 512 aa8.8□□□□□ -1
COL4A3-206ENST00000487633 NFAT5O94916 1531 aa8.8□□□□□ -1
COL4A3-206ENST00000487633 RGPD2P0DJD1 1756 aa8.79□□□□□ -1
COL4A3-206ENST00000487633 C5P01031 1676 aa8.79□□□□□ -1
COL4A3-206ENST00000487633 MSH5O43196 834 aa8.79□□□□□ -1
COL4A3-206ENST00000487633 CSB-PGBD3P0DP91 1061 aa8.79□□□□□ -1
COL4A3-206ENST00000487633 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms