RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 WDR17Q8IZU2 1322 aa35.08■■■■□ 3.21
SEMA3C-209ENST00000487621 USP54Q70EL1 1684 aa35.08■■■■□ 3.21
SEMA3C-209ENST00000487621 SOX12O15370 315 aa35.08■■■■□ 3.21
SEMA3C-209ENST00000487621 TRIM37O94972 964 aa35.08■■■■□ 3.21
SEMA3C-209ENST00000487621 NME9Q86XW9 330 aa35.06■■■■□ 3.2
SEMA3C-209ENST00000487621 A0A1W2PP64 1363 aa35.05■■■■□ 3.2
SEMA3C-209ENST00000487621 TOM1L2Q6ZVM7 507 aa35.05■■■■□ 3.2
SEMA3C-209ENST00000487621 HDGFL2Q7Z4V5 671 aaPredicted RBP35.05■■■■□ 3.2
SEMA3C-209ENST00000487621 EDC4Q6P2E9 1401 aaKnown RBP35.05■■■■□ 3.2
SEMA3C-209ENST00000487621 ABCC6O95255 1503 aa35.02■■■■□ 3.2
SEMA3C-209ENST00000487621 CAMKK2Q96RR4 588 aa35.02■■■■□ 3.2
SEMA3C-209ENST00000487621 EZH2Q15910 746 aaKnown RBP35.01■■■■□ 3.2
SEMA3C-209ENST00000487621 TERF2IPQ9NYB0 399 aa35.01■■■■□ 3.2
SEMA3C-209ENST00000487621 LRRC37A3O60309 1634 aa34.99■■■■□ 3.19
SEMA3C-209ENST00000487621 RGPD5Q99666 1765 aa34.99■■■■□ 3.19
SEMA3C-209ENST00000487621 CARD10Q9BWT7 1032 aa34.98■■■■□ 3.19
SEMA3C-209ENST00000487621 NINLQ9Y2I6 1382 aa34.98■■■■□ 3.19
SEMA3C-209ENST00000487621 SLC24A1O60721 1099 aa34.97■■■■□ 3.19
SEMA3C-209ENST00000487621 APBA3O96018 575 aa34.97■■■■□ 3.19
SEMA3C-209ENST00000487621 PEAK1Q9H792 1746 aa34.97■■■■□ 3.19
SEMA3C-209ENST00000487621 OVOS2A0A0J9YW53 1432 aa34.96■■■■□ 3.19
SEMA3C-209ENST00000487621 OVOS2Q6IE36 1432 aa34.96■■■■□ 3.19
SEMA3C-209ENST00000487621 DDB1Q16531 1140 aa34.95■■■■□ 3.19
SEMA3C-209ENST00000487621 WNK3Q9BYP7 1800 aa34.95■■■■□ 3.18
SEMA3C-209ENST00000487621 PSDA5PKW4 1024 aaPredicted RBP34.94■■■■□ 3.18
SEMA3C-209ENST00000487621 PARD3Q8TEW0 1356 aa34.94■■■■□ 3.18
SEMA3C-209ENST00000487621 OVOS2A0A0G2JMS6 1433 aa34.93■■■■□ 3.18
SEMA3C-209ENST00000487621 USP47Q96K76 1375 aa34.93■■■■□ 3.18
SEMA3C-209ENST00000487621 C11orf95C9JLR9 678 aaPredicted RBP34.92■■■■□ 3.18
SEMA3C-209ENST00000487621 CSB-PGBD3P0DP91 1061 aa34.92■■■■□ 3.18
SEMA3C-209ENST00000487621 CDCA7Q9BWT1 371 aaPredicted RBP34.92■■■■□ 3.18
SEMA3C-209ENST00000487621 ERBB3P21860 1342 aa34.89■■■■□ 3.18
SEMA3C-209ENST00000487621 CCDC7Q96M83 1385 aa34.88■■■■□ 3.17
SEMA3C-209ENST00000487621 TIMELESSQ9UNS1 1208 aa34.88■■■■□ 3.17
SEMA3C-209ENST00000487621 MARCH10Q8NA82 808 aaPredicted RBP34.87■■■■□ 3.17
SEMA3C-209ENST00000487621 CLSPNQ9HAW4 1339 aa34.86■■■■□ 3.17
SEMA3C-209ENST00000487621 BCL9O00512 1426 aa34.86■■■■□ 3.17
SEMA3C-209ENST00000487621 ANKRD36BQ8N2N9 1353 aa34.86■■■■□ 3.17
SEMA3C-209ENST00000487621 RREB1Q92766 1687 aa34.86■■■■□ 3.17
SEMA3C-209ENST00000487621 LRP5O75197 1615 aa34.85■■■■□ 3.17
SEMA3C-209ENST00000487621 LTN1O94822 1766 aa34.85■■■■□ 3.17
SEMA3C-209ENST00000487621 R3HDM1Q15032 1099 aaKnown RBP34.85■■■■□ 3.17
SEMA3C-209ENST00000487621 TMF1P82094 1093 aa34.84■■■■□ 3.17
SEMA3C-209ENST00000487621 SBF2Q86WG5 1849 aa34.81■■■■□ 3.16
SEMA3C-209ENST00000487621 NUP188Q5SRE5 1749 aa34.79■■■■□ 3.16
SEMA3C-209ENST00000487621 PTF1AQ7RTS3 328 aa34.79■■■■□ 3.16
SEMA3C-209ENST00000487621 ANKRD24Q8TF21 1146 aa34.79■■■■□ 3.16
SEMA3C-209ENST00000487621 PCGF6Q9BYE7 350 aa34.79■■■■□ 3.16
SEMA3C-209ENST00000487621 EXOC5O00471 708 aa34.77■■■■□ 3.16
SEMA3C-209ENST00000487621 IP6K1Q92551 441 aa34.77■■■■□ 3.16
SEMA3C-209ENST00000487621 BCL11BQ9C0K0 894 aaPredicted RBP34.77■■■■□ 3.16
SEMA3C-209ENST00000487621 NLRP2Q9NX02 1062 aa34.77■■■■□ 3.16
SEMA3C-209ENST00000487621 TNS2Q63HR2 1409 aa34.77■■■■□ 3.16
SEMA3C-209ENST00000487621 COG3Q96JB2 828 aa34.76■■■■□ 3.16
SEMA3C-209ENST00000487621 PLSCR1O15162 318 aa34.75■■■■□ 3.15
SEMA3C-209ENST00000487621 RGPD3A6NKT7 1758 aaPredicted RBP34.72■■■■□ 3.15
SEMA3C-209ENST00000487621 RGPD4Q7Z3J3 1758 aa34.72■■■■□ 3.15
SEMA3C-209ENST00000487621 MAP3K19Q56UN5 1328 aa34.72■■■■□ 3.15
SEMA3C-209ENST00000487621 FBLN1P23142 703 aa34.71■■■■□ 3.15
SEMA3C-209ENST00000487621 FYB1O15117 783 aa34.7■■■■□ 3.15
SEMA3C-209ENST00000487621 IL2RBP14784 551 aa34.7■■■■□ 3.15
SEMA3C-209ENST00000487621 CDCA8Q53HL2 280 aa34.7■■■■□ 3.15
SEMA3C-209ENST00000487621 HOXC9P31274 260 aa34.67■■■■□ 3.14
SEMA3C-209ENST00000487621 NBPF14Q5TI25 921 aa34.67■■■■□ 3.14
SEMA3C-209ENST00000487621 PROM2Q8N271 834 aa34.65■■■■□ 3.14
SEMA3C-209ENST00000487621 GGNBP2Q9H3C7 697 aa34.65■■■■□ 3.14
SEMA3C-209ENST00000487621 LTV1Q96GA3 475 aaPredicted RBP34.62■■■■□ 3.13
SEMA3C-209ENST00000487621 MYOM1P52179 1685 aa34.62■■■■□ 3.13
SEMA3C-209ENST00000487621 FAM208AQ9UK61 1670 aaKnown RBP34.61■■■■□ 3.13
SEMA3C-209ENST00000487621 KCNQ2O43526 872 aa34.61■■■■□ 3.13
SEMA3C-209ENST00000487621 AMPHP49418 695 aa34.61■■■■□ 3.13
SEMA3C-209ENST00000487621 CARD14Q9BXL6 1004 aa34.61■■■■□ 3.13
SEMA3C-209ENST00000487621 RTL1A6NKG5 1358 aa34.6■■■■□ 3.13
SEMA3C-209ENST00000487621 RRS1Q15050 365 aaKnown RBP34.58■■■■□ 3.13
SEMA3C-209ENST00000487621 ANO8Q9HCE9 1232 aaPredicted RBP34.58■■■■□ 3.13
SEMA3C-209ENST00000487621 NHSQ6T4R5 1651 aa34.57■■■■□ 3.13
SEMA3C-209ENST00000487621 ACSBG1Q96GR2 724 aa34.54■■■■□ 3.12
SEMA3C-209ENST00000487621 TXNRD1Q16881 649 aa34.53■■■■□ 3.12
SEMA3C-209ENST00000487621 NSD3Q9BZ95 1437 aa34.53■■■■□ 3.12
SEMA3C-209ENST00000487621 KIF20BQ96Q89 1820 aa34.53■■■■□ 3.12
SEMA3C-209ENST00000487621 RGPD2P0DJD1 1756 aa34.49■■■■□ 3.11
SEMA3C-209ENST00000487621 NBPF6Q5VWK0 638 aa34.48■■■■□ 3.11
SEMA3C-209ENST00000487621 NBPF4Q96M43 638 aa34.48■■■■□ 3.11
SEMA3C-209ENST00000487621 MEGF6O75095 1541 aa34.47■■■■□ 3.11
SEMA3C-209ENST00000487621 CCER1Q8TC90 406 aaPredicted RBP34.47■■■■□ 3.11
SEMA3C-209ENST00000487621 INSRP06213 1382 aa34.46■■■■□ 3.11
SEMA3C-209ENST00000487621 KIF24Q5T7B8 1368 aa34.46■■■■□ 3.11
SEMA3C-209ENST00000487621 HSP90AB2PQ58FF8 381 aa34.45■■■■□ 3.11
SEMA3C-209ENST00000487621 DDX54Q8TDD1 881 aaKnown RBP34.45■■■■□ 3.11
SEMA3C-209ENST00000487621 FLT4P35916 1363 aa34.44■■■■□ 3.1
SEMA3C-209ENST00000487621 CASZ1Q86V15 1759 aa34.43■■■■□ 3.1
SEMA3C-209ENST00000487621 HSPA5P11021 654 aaKnown RBP34.42■■■■□ 3.1
SEMA3C-209ENST00000487621 BTAF1O14981 1849 aa34.41■■■■□ 3.1
SEMA3C-209ENST00000487621 SHANK3Q9BYB0 1731 aa34.41■■■■□ 3.1
SEMA3C-209ENST00000487621 EIF4G2P78344 907 aaKnown RBP eCLIP34.41■■■■□ 3.1
SEMA3C-209ENST00000487621 ZCRB1Q8TBF4 217 aaKnown RBP34.41■■■■□ 3.1
SEMA3C-209ENST00000487621 PDGFDQ9GZP0 370 aaPredicted RBP34.41■■■■□ 3.1
SEMA3C-209ENST00000487621 SPON1Q9HCB6 807 aa34.41■■■■□ 3.1
SEMA3C-209ENST00000487621 SMG6Q86US8 1419 aaKnown RBP34.4■■■■□ 3.1
SEMA3C-209ENST00000487621 USHBP1Q8N6Y0 703 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms