RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-215	ENST00000487563	ST20-MTHFS	A0A0A6YYL1	179 aa		33.25	■■■□□ 2.91
PLOD3-215	ENST00000487563	AXIN2	Q9Y2T1	843 aa		33.25	■■■□□ 2.91
PLOD3-215	ENST00000487563	CSB-PGBD3	P0DP91	1061 aa		33.24	■■■□□ 2.91
PLOD3-215	ENST00000487563	NME9	Q86XW9	330 aa		33.24	■■■□□ 2.91
PLOD3-215	ENST00000487563	PUS7	Q96PZ0	661 aa	Known RBP	33.24	■■■□□ 2.91
PLOD3-215	ENST00000487563	EDC4	Q6P2E9	1401 aa	Known RBP	33.23	■■■□□ 2.91
PLOD3-215	ENST00000487563	USP31	Q70CQ4	1352 aa		33.22	■■■□□ 2.91
PLOD3-215	ENST00000487563		A0A1W2PP64	1363 aa		33.21	■■■□□ 2.91
PLOD3-215	ENST00000487563	SLC24A1	O60721	1099 aa		33.21	■■■□□ 2.91
PLOD3-215	ENST00000487563	TESK2	Q96S53	571 aa		33.21	■■■□□ 2.91
PLOD3-215	ENST00000487563	RGPD5	Q99666	1765 aa		33.2	■■■□□ 2.91
PLOD3-215	ENST00000487563	APBA3	O96018	575 aa		33.2	■■■□□ 2.91
PLOD3-215	ENST00000487563	USP54	Q70EL1	1684 aa		33.2	■■■□□ 2.9
PLOD3-215	ENST00000487563	NINL	Q9Y2I6	1382 aa		33.19	■■■□□ 2.9
PLOD3-215	ENST00000487563	ABCC6	O95255	1503 aa		33.18	■■■□□ 2.9
PLOD3-215	ENST00000487563	LRRC37A3	O60309	1634 aa		33.18	■■■□□ 2.9
PLOD3-215	ENST00000487563	PSD	A5PKW4	1024 aa	Predicted RBP	33.18	■■■□□ 2.9
PLOD3-215	ENST00000487563	DDB1	Q16531	1140 aa		33.18	■■■□□ 2.9
PLOD3-215	ENST00000487563	EZH2	Q15910	746 aa	Known RBP	33.17	■■■□□ 2.9
PLOD3-215	ENST00000487563	SRCAP	Q6ZRS2	3230 aa		33.17	■■■□□ 2.9
PLOD3-215	ENST00000487563	WNK3	Q9BYP7	1800 aa		33.16	■■■□□ 2.9
PLOD3-215	ENST00000487563	C11orf95	C9JLR9	678 aa	Predicted RBP	33.16	■■■□□ 2.9
PLOD3-215	ENST00000487563	OVOS2	A0A0G2JMS6	1433 aa		33.16	■■■□□ 2.9
PLOD3-215	ENST00000487563	OVOS2	A0A0J9YW53	1432 aa		33.16	■■■□□ 2.9
PLOD3-215	ENST00000487563	OVOS2	Q6IE36	1432 aa		33.16	■■■□□ 2.9
PLOD3-215	ENST00000487563	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.15	■■■□□ 2.9
PLOD3-215	ENST00000487563	USP47	Q96K76	1375 aa		33.14	■■■□□ 2.9
PLOD3-215	ENST00000487563	CARD10	Q9BWT7	1032 aa		33.14	■■■□□ 2.9
PLOD3-215	ENST00000487563	PARD3	Q8TEW0	1356 aa		33.13	■■■□□ 2.89
PLOD3-215	ENST00000487563	CAMKK2	Q96RR4	588 aa		33.12	■■■□□ 2.89
PLOD3-215	ENST00000487563	PCGF6	Q9BYE7	350 aa		33.11	■■■□□ 2.89
PLOD3-215	ENST00000487563	LTN1	O94822	1766 aa		33.11	■■■□□ 2.89
PLOD3-215	ENST00000487563	CCDC7	Q96M83	1385 aa		33.09	■■■□□ 2.89
PLOD3-215	ENST00000487563	TMF1	P82094	1093 aa		33.09	■■■□□ 2.89
PLOD3-215	ENST00000487563	R3HDM1	Q15032	1099 aa	Known RBP	33.08	■■■□□ 2.89
PLOD3-215	ENST00000487563	PEAK1	Q9H792	1746 aa		33.08	■■■□□ 2.89
PLOD3-215	ENST00000487563	ERBB3	P21860	1342 aa		33.04	■■■□□ 2.88
PLOD3-215	ENST00000487563	LRP5	O75197	1615 aa		33.04	■■■□□ 2.88
PLOD3-215	ENST00000487563	NLRP2	Q9NX02	1062 aa		33.04	■■■□□ 2.88
PLOD3-215	ENST00000487563	RREB1	Q92766	1687 aa		33.04	■■■□□ 2.88
PLOD3-215	ENST00000487563	CLSPN	Q9HAW4	1339 aa		33.03	■■■□□ 2.88
PLOD3-215	ENST00000487563	TIMELESS	Q9UNS1	1208 aa		33.03	■■■□□ 2.88
PLOD3-215	ENST00000487563	ANKRD36B	Q8N2N9	1353 aa		33.03	■■■□□ 2.88
PLOD3-215	ENST00000487563	COG3	Q96JB2	828 aa		33.02	■■■□□ 2.88
PLOD3-215	ENST00000487563	EXOC5	O00471	708 aa		33.01	■■■□□ 2.87
PLOD3-215	ENST00000487563	MARCH10	Q8NA82	808 aa	Predicted RBP	33.01	■■■□□ 2.87
PLOD3-215	ENST00000487563	ANKRD24	Q8TF21	1146 aa		33.01	■■■□□ 2.87
PLOD3-215	ENST00000487563	CDCA8	Q53HL2	280 aa		32.99	■■■□□ 2.87
PLOD3-215	ENST00000487563	SBF2	Q86WG5	1849 aa		32.99	■■■□□ 2.87
PLOD3-215	ENST00000487563	NUP188	Q5SRE5	1749 aa		32.99	■■■□□ 2.87
PLOD3-215	ENST00000487563	TNS2	Q63HR2	1409 aa		32.98	■■■□□ 2.87
PLOD3-215	ENST00000487563	NBPF14	Q5TI25	921 aa		32.97	■■■□□ 2.87
PLOD3-215	ENST00000487563	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.95	■■■□□ 2.87
PLOD3-215	ENST00000487563	BCL9	O00512	1426 aa		32.94	■■■□□ 2.86
PLOD3-215	ENST00000487563	IP6K1	Q92551	441 aa		32.93	■■■□□ 2.86
PLOD3-215	ENST00000487563	IL2RB	P14784	551 aa		32.92	■■■□□ 2.86
PLOD3-215	ENST00000487563	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.91	■■■□□ 2.86
PLOD3-215	ENST00000487563	RGPD4	Q7Z3J3	1758 aa		32.91	■■■□□ 2.86
PLOD3-215	ENST00000487563	LTV1	Q96GA3	475 aa	Predicted RBP	32.91	■■■□□ 2.86
PLOD3-215	ENST00000487563	AMPH	P49418	695 aa		32.9	■■■□□ 2.86
PLOD3-215	ENST00000487563	MAP3K19	Q56UN5	1328 aa		32.89	■■■□□ 2.86
PLOD3-215	ENST00000487563	PLSCR1	O15162	318 aa		32.89	■■■□□ 2.86
PLOD3-215	ENST00000487563	FAM208A	Q9UK61	1670 aa	Known RBP	32.88	■■■□□ 2.85
PLOD3-215	ENST00000487563	PTF1A	Q7RTS3	328 aa		32.88	■■■□□ 2.85
PLOD3-215	ENST00000487563	GGNBP2	Q9H3C7	697 aa		32.87	■■■□□ 2.85
PLOD3-215	ENST00000487563	HOXC9	P31274	260 aa		32.85	■■■□□ 2.85
PLOD3-215	ENST00000487563	FYB1	O15117	783 aa		32.84	■■■□□ 2.85
PLOD3-215	ENST00000487563	FBLN1	P23142	703 aa		32.84	■■■□□ 2.85
PLOD3-215	ENST00000487563	KIF20B	Q96Q89	1820 aa		32.82	■■■□□ 2.84
PLOD3-215	ENST00000487563	CCER1	Q8TC90	406 aa	Predicted RBP	32.82	■■■□□ 2.84
PLOD3-215	ENST00000487563	RTL1	A6NKG5	1358 aa		32.82	■■■□□ 2.84
PLOD3-215	ENST00000487563	MYOM1	P52179	1685 aa		32.81	■■■□□ 2.84
PLOD3-215	ENST00000487563	RRS1	Q15050	365 aa	Known RBP	32.8	■■■□□ 2.84
PLOD3-215	ENST00000487563	NHS	Q6T4R5	1651 aa		32.8	■■■□□ 2.84
PLOD3-215	ENST00000487563	ACSBG1	Q96GR2	724 aa		32.79	■■■□□ 2.84
PLOD3-215	ENST00000487563	KCNQ2	O43526	872 aa		32.77	■■■□□ 2.84
PLOD3-215	ENST00000487563	NSD3	Q9BZ95	1437 aa		32.77	■■■□□ 2.84
PLOD3-215	ENST00000487563	SMG6	Q86US8	1419 aa	Known RBP	32.76	■■■□□ 2.83
PLOD3-215	ENST00000487563	TXNRD1	Q16881	649 aa		32.74	■■■□□ 2.83
PLOD3-215	ENST00000487563	POLR3GL	Q9BT43	218 aa		32.74	■■■□□ 2.83
PLOD3-215	ENST00000487563	DDX54	Q8TDD1	881 aa	Known RBP	32.73	■■■□□ 2.83
PLOD3-215	ENST00000487563	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.73	■■■□□ 2.83
PLOD3-215	ENST00000487563	PROM2	Q8N271	834 aa		32.72	■■■□□ 2.83
PLOD3-215	ENST00000487563	CARD14	Q9BXL6	1004 aa		32.72	■■■□□ 2.83
PLOD3-215	ENST00000487563	RGPD2	P0DJD1	1756 aa		32.71	■■■□□ 2.83
PLOD3-215	ENST00000487563	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.68	■■■□□ 2.82
PLOD3-215	ENST00000487563	SPON1	Q9HCB6	807 aa		32.68	■■■□□ 2.82
PLOD3-215	ENST00000487563	STK32B	Q9NY57	414 aa		32.68	■■■□□ 2.82
PLOD3-215	ENST00000487563	FLT4	P35916	1363 aa		32.68	■■■□□ 2.82
PLOD3-215	ENST00000487563	KAT6B	Q8WYB5	2073 aa		32.67	■■■□□ 2.82
PLOD3-215	ENST00000487563	BTAF1	O14981	1849 aa		32.67	■■■□□ 2.82
PLOD3-215	ENST00000487563	MEGF6	O75095	1541 aa		32.66	■■■□□ 2.82
PLOD3-215	ENST00000487563	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.65	■■■□□ 2.82
PLOD3-215	ENST00000487563	INSR	P06213	1382 aa		32.65	■■■□□ 2.82
PLOD3-215	ENST00000487563	KIF24	Q5T7B8	1368 aa		32.65	■■■□□ 2.82
PLOD3-215	ENST00000487563	CGNL1	Q0VF96	1302 aa		32.64	■■■□□ 2.82
PLOD3-215	ENST00000487563	NBPF6	Q5VWK0	638 aa		32.64	■■■□□ 2.82
PLOD3-215	ENST00000487563	USHBP1	Q8N6Y0	703 aa		32.64	■■■□□ 2.82
PLOD3-215	ENST00000487563	ZCRB1	Q8TBF4	217 aa	Known RBP	32.64	■■■□□ 2.82
PLOD3-215	ENST00000487563	NBPF4	Q96M43	638 aa		32.64	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms