RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 PPIP5K1Q6PFW1 1433 aa22.29■■□□□ 1.16
NME1-208ENST00000487481 RAB3GAP2Q9H2M9 1393 aa22.28■■□□□ 1.16
NME1-208ENST00000487481 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
NME1-208ENST00000487481 COL18A1P39060 1754 aa22.27■■□□□ 1.16
NME1-208ENST00000487481 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
NME1-208ENST00000487481 TOM1L2Q6ZVM7 507 aa22.27■■□□□ 1.16
NME1-208ENST00000487481 SYT17Q9BSW7 474 aa22.27■■□□□ 1.16
NME1-208ENST00000487481 CDCA7Q9BWT1 371 aaPredicted RBP22.27■■□□□ 1.16
NME1-208ENST00000487481 FHDC1Q9C0D6 1143 aaPredicted RBP22.27■■□□□ 1.16
NME1-208ENST00000487481 STK32BQ9NY57 414 aa22.27■■□□□ 1.16
NME1-208ENST00000487481 ATF5Q9Y2D1 282 aaPredicted RBP22.27■■□□□ 1.16
NME1-208ENST00000487481 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
NME1-208ENST00000487481 MARCH10Q8NA82 808 aaPredicted RBP22.25■■□□□ 1.15
NME1-208ENST00000487481 MTFR1LQ9H019 292 aa22.25■■□□□ 1.15
NME1-208ENST00000487481 WDR17Q8IZU2 1322 aa22.25■■□□□ 1.15
NME1-208ENST00000487481 C1QTNF8P60827 252 aa22.24■■□□□ 1.15
NME1-208ENST00000487481 SLC15A2Q16348 729 aa22.24■■□□□ 1.15
NME1-208ENST00000487481 TXNRD1Q16881 649 aa22.24■■□□□ 1.15
NME1-208ENST00000487481 USP6P35125 1406 aa22.23■■□□□ 1.15
NME1-208ENST00000487481 SRPK2P78362 688 aaKnown RBP22.23■■□□□ 1.15
NME1-208ENST00000487481 NLRP6P59044 892 aa22.22■■□□□ 1.15
NME1-208ENST00000487481 SGIP1Q9BQI5 828 aa22.22■■□□□ 1.15
NME1-208ENST00000487481 PIK3C2AO00443 1686 aa22.21■■□□□ 1.15
NME1-208ENST00000487481 CPSF1Q10570 1443 aaKnown RBP22.21■■□□□ 1.15
NME1-208ENST00000487481 QRICH2Q9H0J4 1663 aa22.2■■□□□ 1.15
NME1-208ENST00000487481 MAP3K5Q99683 1374 aa22.2■■□□□ 1.14
NME1-208ENST00000487481 RGPD5Q99666 1765 aa22.18■■□□□ 1.14
NME1-208ENST00000487481 NHSQ6T4R5 1651 aa22.18■■□□□ 1.14
NME1-208ENST00000487481 AXIN2Q9Y2T1 843 aa22.18■■□□□ 1.14
NME1-208ENST00000487481 CARD10Q9BWT7 1032 aa22.17■■□□□ 1.14
NME1-208ENST00000487481 CABP2Q9NPB3 220 aa22.17■■□□□ 1.14
NME1-208ENST00000487481 PAPPAQ13219 1627 aa22.17■■□□□ 1.14
NME1-208ENST00000487481 TNS2Q63HR2 1409 aa22.16■■□□□ 1.14
NME1-208ENST00000487481 CENPJQ9HC77 1338 aaPredicted RBP22.16■■□□□ 1.14
NME1-208ENST00000487481 ARXQ96QS3 562 aa22.16■■□□□ 1.14
NME1-208ENST00000487481 TRPM1Q7Z4N2 1603 aa22.16■■□□□ 1.14
NME1-208ENST00000487481 EXOC5O00471 708 aa22.14■■□□□ 1.13
NME1-208ENST00000487481 CABP1Q9NZU7 370 aa22.14■■□□□ 1.13
NME1-208ENST00000487481 CCDC7Q96M83 1385 aa22.13■■□□□ 1.13
NME1-208ENST00000487481 CSB-PGBD3P0DP91 1061 aa22.13■■□□□ 1.13
NME1-208ENST00000487481 ARHGEF25Q86VW2 580 aa22.13■■□□□ 1.13
NME1-208ENST00000487481 ABCC6O95255 1503 aa22.12■■□□□ 1.13
NME1-208ENST00000487481 IFFO2Q5TF58 517 aa22.12■■□□□ 1.13
NME1-208ENST00000487481 KCNH5Q8NCM2 988 aa22.12■■□□□ 1.13
NME1-208ENST00000487481 NBPF1Q3BBV0 1214 aa22.11■■□□□ 1.13
NME1-208ENST00000487481 GOLGB1Q14789 3259 aaKnown RBP22.11■■□□□ 1.13
NME1-208ENST00000487481 GIGYF1O75420 1035 aaPredicted RBP22.09■■□□□ 1.13
NME1-208ENST00000487481 BTAF1O14981 1849 aa22.08■■□□□ 1.13
NME1-208ENST00000487481 NFAT5O94916 1531 aa22.08■■□□□ 1.13
NME1-208ENST00000487481 GPR162Q16538 588 aa22.08■■□□□ 1.13
NME1-208ENST00000487481 CEP350Q5VT06 3117 aa22.08■■□□□ 1.12
NME1-208ENST00000487481 QSER1Q2KHR3 1735 aa22.06■■□□□ 1.12
NME1-208ENST00000487481 TTC21BQ7Z4L5 1316 aa22.05■■□□□ 1.12
NME1-208ENST00000487481 COL24A1Q17RW2 1714 aa22.04■■□□□ 1.12
NME1-208ENST00000487481 SOX12O15370 315 aa22.04■■□□□ 1.12
NME1-208ENST00000487481 ZNF827Q17R98 1081 aa22.04■■□□□ 1.12
NME1-208ENST00000487481 ACSBG1Q96GR2 724 aa22.04■■□□□ 1.12
NME1-208ENST00000487481 TTC21AQ8NDW8 1320 aa22.04■■□□□ 1.12
NME1-208ENST00000487481 ZNF692Q9BU19 519 aaPredicted RBP22.03■■□□□ 1.12
NME1-208ENST00000487481 KAT6BQ8WYB5 2073 aa22.03■■□□□ 1.12
NME1-208ENST00000487481 SHANK3Q9BYB0 1731 aa22.03■■□□□ 1.12
NME1-208ENST00000487481 SLC16A10Q8TF71 515 aa22.02■■□□□ 1.12
NME1-208ENST00000487481 EVC2Q86UK5 1308 aa22.02■■□□□ 1.12
NME1-208ENST00000487481 POLD1P28340 1107 aa21.99■■□□□ 1.11
NME1-208ENST00000487481 LRRC4BQ9NT99 713 aa21.99■■□□□ 1.11
NME1-208ENST00000487481 ERBB3P21860 1342 aa21.99■■□□□ 1.11
NME1-208ENST00000487481 IL2RBP14784 551 aa21.98■■□□□ 1.11
NME1-208ENST00000487481 KLHL34Q8N239 644 aa21.98■■□□□ 1.11
NME1-208ENST00000487481 AKT1S1Q96B36 256 aa21.97■■□□□ 1.11
NME1-208ENST00000487481 USP54Q70EL1 1684 aa21.97■■□□□ 1.11
NME1-208ENST00000487481 TUBGCP6Q96RT7 1819 aa21.96■■□□□ 1.11
NME1-208ENST00000487481 SLC27A3Q5K4L6 730 aa21.96■■□□□ 1.11
NME1-208ENST00000487481 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
NME1-208ENST00000487481 MON2Q7Z3U7 1717 aa21.96■■□□□ 1.11
NME1-208ENST00000487481 LTN1O94822 1766 aa21.95■■□□□ 1.1
NME1-208ENST00000487481 NLRP2Q9NX02 1062 aa21.95■■□□□ 1.1
NME1-208ENST00000487481 PNPLA7Q6ZV29 1317 aa21.94■■□□□ 1.1
NME1-208ENST00000487481 KTN1Q86UP2 1357 aaKnown RBP21.94■■□□□ 1.1
NME1-208ENST00000487481 USP31Q70CQ4 1352 aa21.92■■□□□ 1.1
NME1-208ENST00000487481 GRIN3BO60391 1043 aa21.91■■□□□ 1.1
NME1-208ENST00000487481 NLGN2Q8NFZ4 835 aa21.91■■□□□ 1.1
NME1-208ENST00000487481 TFCP2L1Q9NZI6 479 aa21.89■■□□□ 1.09
NME1-208ENST00000487481 ANKRD24Q8TF21 1146 aa21.88■■□□□ 1.09
NME1-208ENST00000487481 LY75O60449 1722 aa21.88■■□□□ 1.09
NME1-208ENST00000487481 FAM208AQ9UK61 1670 aaKnown RBP21.87■■□□□ 1.09
NME1-208ENST00000487481 YBX3P16989 372 aaKnown RBP eCLIP21.86■■□□□ 1.092e-8■■■■□ 19.5
NME1-208ENST00000487481 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.85■■□□□ 1.09
NME1-208ENST00000487481 ATP10DQ9P241 1426 aa21.85■■□□□ 1.09
NME1-208ENST00000487481 DOT1LQ8TEK3 1739 aa21.85■■□□□ 1.09
NME1-208ENST00000487481 POTEDQ86YR6 584 aa21.83■■□□□ 1.09
NME1-208ENST00000487481 ANKRD36BQ8N2N9 1353 aa21.83■■□□□ 1.08
NME1-208ENST00000487481 NME9Q86XW9 330 aa21.82■■□□□ 1.08
NME1-208ENST00000487481 DDX54Q8TDD1 881 aaKnown RBP21.82■■□□□ 1.08
NME1-208ENST00000487481 SBNO2Q9Y2G9 1366 aa21.82■■□□□ 1.08
NME1-208ENST00000487481 KCNQ4P56696 695 aa21.81■■□□□ 1.08
NME1-208ENST00000487481 ROCK2O75116 1388 aaKnown RBP21.81■■□□□ 1.08
NME1-208ENST00000487481 CD163L1Q9NR16 1453 aa21.8■■□□□ 1.08
NME1-208ENST00000487481 NSD2O96028 1365 aa21.8■■□□□ 1.08
NME1-208ENST00000487481 SYTL4Q96C24 671 aaPredicted RBP21.8■■□□□ 1.08
NME1-208ENST00000487481 PRIM1P49642 420 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms