RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 GJD4Q96KN9 370 aaPredicted RBP16.09■□□□□ 0.17
CLIP2-207ENST00000487447 WNK3Q9BYP7 1800 aa16.09■□□□□ 0.17
CLIP2-207ENST00000487447 CGNL1Q0VF96 1302 aa16.09■□□□□ 0.17
CLIP2-207ENST00000487447 CHRNA2Q15822 529 aa16.08■□□□□ 0.16
CLIP2-207ENST00000487447 GGNBP2Q9H3C7 697 aa16.08■□□□□ 0.16
CLIP2-207ENST00000487447 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.16
CLIP2-207ENST00000487447 PEAK1Q9H792 1746 aa16.08■□□□□ 0.16
CLIP2-207ENST00000487447 PER1O15534 1290 aaPredicted RBP16.07■□□□□ 0.16
CLIP2-207ENST00000487447 BLMP54132 1417 aaPredicted RBP16.07■□□□□ 0.16
CLIP2-207ENST00000487447 RTL1A6NKG5 1358 aa16.06■□□□□ 0.16
CLIP2-207ENST00000487447 KIF24Q5T7B8 1368 aa16.06■□□□□ 0.16
CLIP2-207ENST00000487447 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
CLIP2-207ENST00000487447 SPATA31A5Q5VU36 1347 aa16.04■□□□□ 0.16
CLIP2-207ENST00000487447 SPATA31A7Q8IWB4 1347 aa16.04■□□□□ 0.16
CLIP2-207ENST00000487447 MAP2P11137 1827 aaKnown RBP16.04■□□□□ 0.16
CLIP2-207ENST00000487447 AMER1Q5JTC6 1135 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-207ENST00000487447 AXIN2Q9Y2T1 843 aa16.04■□□□□ 0.16
CLIP2-207ENST00000487447 CRB1P82279 1406 aa16.03■□□□□ 0.16
CLIP2-207ENST00000487447 SMG6Q86US8 1419 aaKnown RBP16.03■□□□□ 0.16
CLIP2-207ENST00000487447 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
CLIP2-207ENST00000487447 MAP3K19Q56UN5 1328 aa16.03■□□□□ 0.16
CLIP2-207ENST00000487447 ONECUT3O60422 494 aaPredicted RBP16.03■□□□□ 0.16
CLIP2-207ENST00000487447 BRWD3Q6RI45 1802 aa16.03■□□□□ 0.16
CLIP2-207ENST00000487447 SPATA31A1Q5TZJ5 1347 aa16.02■□□□□ 0.16
CLIP2-207ENST00000487447 WDR17Q8IZU2 1322 aa16.02■□□□□ 0.16
CLIP2-207ENST00000487447 SOX12O15370 315 aa16.02■□□□□ 0.16
CLIP2-207ENST00000487447 CCDC125Q86Z20 511 aa16.01■□□□□ 0.15
CLIP2-207ENST00000487447 IP6K1Q92551 441 aa16.01■□□□□ 0.15
CLIP2-207ENST00000487447 KNSTRNQ9Y448 316 aa16.01■□□□□ 0.15
CLIP2-207ENST00000487447 ERBB3P21860 1342 aa16■□□□□ 0.15
CLIP2-207ENST00000487447 CCDC9Q9Y3X0 531 aaKnown RBP16■□□□□ 0.15
CLIP2-207ENST00000487447 LARP1Q6PKG0 1096 aaKnown RBP15.99■□□□□ 0.15
CLIP2-207ENST00000487447 FLT4P35916 1363 aa15.99■□□□□ 0.15
CLIP2-207ENST00000487447 LRRC37A3O60309 1634 aa15.98■□□□□ 0.15
CLIP2-207ENST00000487447 RGPD2P0DJD1 1756 aa15.98■□□□□ 0.15
CLIP2-207ENST00000487447 FBLN1P23142 703 aa15.98■□□□□ 0.15
CLIP2-207ENST00000487447 HOXC9P31274 260 aa15.98■□□□□ 0.15
CLIP2-207ENST00000487447 SEPT12Q8IYM1 358 aa15.98■□□□□ 0.15
CLIP2-207ENST00000487447 STRN4Q9NRL3 753 aa15.98■□□□□ 0.15
CLIP2-207ENST00000487447 THRAP3Q9Y2W1 955 aaKnown RBP15.98■□□□□ 0.15
CLIP2-207ENST00000487447 INSRP06213 1382 aa15.98■□□□□ 0.15
CLIP2-207ENST00000487447 DISP2A7MBM2 1401 aa15.97■□□□□ 0.15
CLIP2-207ENST00000487447 EVA1CP58658 441 aa15.97■□□□□ 0.15
CLIP2-207ENST00000487447 BARGINQ6ZT62 677 aa15.97■□□□□ 0.15
CLIP2-207ENST00000487447 NCAPD2Q15021 1401 aa15.96■□□□□ 0.15
CLIP2-207ENST00000487447 ZBTB7CA1YPR0 619 aa15.96■□□□□ 0.15
CLIP2-207ENST00000487447 RRS1Q15050 365 aaKnown RBP15.96■□□□□ 0.15
CLIP2-207ENST00000487447 DEFB132Q7Z7B7 95 aa15.96■□□□□ 0.15
CLIP2-207ENST00000487447 CARD10Q9BWT7 1032 aa15.95■□□□□ 0.14
CLIP2-207ENST00000487447 POLKQ9UBT6 870 aa15.95■□□□□ 0.14
CLIP2-207ENST00000487447 TCP11L2Q8N4U5 519 aa15.94■□□□□ 0.14
CLIP2-207ENST00000487447 ANKRD24Q8TF21 1146 aa15.94■□□□□ 0.14
CLIP2-207ENST00000487447 AMPHP49418 695 aa15.93■□□□□ 0.14
CLIP2-207ENST00000487447 FAM98CQ17RN3 349 aaKnown RBP15.93■□□□□ 0.14
CLIP2-207ENST00000487447 EMILIN1Q9Y6C2 1016 aa15.93■□□□□ 0.14
CLIP2-207ENST00000487447 RGPD1P0DJD0 1748 aa15.93■□□□□ 0.14
CLIP2-207ENST00000487447 A0A0G2JS52 829 aa15.92■□□□□ 0.14
CLIP2-207ENST00000487447 MYT1Q01538 1121 aa15.92■□□□□ 0.14
CLIP2-207ENST00000487447 TOM1L2Q6ZVM7 507 aa15.92■□□□□ 0.14
CLIP2-207ENST00000487447 MORC1Q86VD1 984 aa15.92■□□□□ 0.14
CLIP2-207ENST00000487447 SF3B2Q13435 895 aaKnown RBP15.91■□□□□ 0.14
CLIP2-207ENST00000487447 HSP90AB2PQ58FF8 381 aa15.91■□□□□ 0.14
CLIP2-207ENST00000487447 KRT27Q7Z3Y8 459 aa15.91■□□□□ 0.14
CLIP2-207ENST00000487447 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
CLIP2-207ENST00000487447 SRCAPQ6ZRS2 3230 aa15.89■□□□□ 0.13
CLIP2-207ENST00000487447 CSB-PGBD3P0DP91 1061 aa15.89■□□□□ 0.13
CLIP2-207ENST00000487447 CDCA7Q9BWT1 371 aaPredicted RBP15.89■□□□□ 0.13
CLIP2-207ENST00000487447 EP400Q96L91 3159 aa15.89■□□□□ 0.13
CLIP2-207ENST00000487447 TNS2Q63HR2 1409 aa15.88■□□□□ 0.13
CLIP2-207ENST00000487447 CC2D1BQ5T0F9 858 aaKnown RBP15.88■□□□□ 0.13
CLIP2-207ENST00000487447 USP35Q9P2H5 1018 aa15.88■□□□□ 0.13
CLIP2-207ENST00000487447 COL3A1P02461 1466 aaPredicted RBP15.88■□□□□ 0.13
CLIP2-207ENST00000487447 PKD1L3Q7Z443 1732 aa15.88■□□□□ 0.13
CLIP2-207ENST00000487447 PARD3Q8TEW0 1356 aa15.87■□□□□ 0.13
CLIP2-207ENST00000487447 TNNT2P45379 298 aaPredicted RBP15.87■□□□□ 0.13
CLIP2-207ENST00000487447 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
CLIP2-207ENST00000487447 FAM182BQ5T319 152 aa15.86■□□□□ 0.13
CLIP2-207ENST00000487447 NLRP2Q9NX02 1062 aa15.86■□□□□ 0.13
CLIP2-207ENST00000487447 BCL9O00512 1426 aa15.85■□□□□ 0.13
CLIP2-207ENST00000487447 TNS1Q9HBL0 1735 aaKnown RBP15.85■□□□□ 0.13
CLIP2-207ENST00000487447 SBF2Q86WG5 1849 aa15.85■□□□□ 0.13
CLIP2-207ENST00000487447 MEGF6O75095 1541 aa15.85■□□□□ 0.13
CLIP2-207ENST00000487447 NBPF6Q5VWK0 638 aa15.85■□□□□ 0.13
CLIP2-207ENST00000487447 NBPF4Q96M43 638 aa15.85■□□□□ 0.13
CLIP2-207ENST00000487447 OVOS2A0A0G2JMS6 1433 aa15.85■□□□□ 0.13
CLIP2-207ENST00000487447 ZNF316A6NFI3 1004 aaPredicted RBP15.84■□□□□ 0.13
CLIP2-207ENST00000487447 LTV1Q96GA3 475 aaPredicted RBP15.84■□□□□ 0.13
CLIP2-207ENST00000487447 IL2RBP14784 551 aa15.83■□□□□ 0.12
CLIP2-207ENST00000487447 DDX10Q13206 875 aaKnown RBP15.83■□□□□ 0.12
CLIP2-207ENST00000487447 EIF4A2Q14240 407 aaKnown RBP15.83■□□□□ 0.12
CLIP2-207ENST00000487447 PSDA5PKW4 1024 aaPredicted RBP15.82■□□□□ 0.12
CLIP2-207ENST00000487447 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
CLIP2-207ENST00000487447 MTHFSP49914 203 aa15.82■□□□□ 0.12
CLIP2-207ENST00000487447 IGSF1Q8N6C5 1336 aa15.82■□□□□ 0.12
CLIP2-207ENST00000487447 KDRP35968 1356 aa15.81■□□□□ 0.12
CLIP2-207ENST00000487447 BAG6P46379 1132 aa15.81■□□□□ 0.12
CLIP2-207ENST00000487447 DDB1Q16531 1140 aa15.81■□□□□ 0.12
CLIP2-207ENST00000487447 EYA1Q99502 592 aa15.81■□□□□ 0.12
CLIP2-207ENST00000487447 EN1Q05925 392 aaPredicted RBP15.8■□□□□ 0.12
CLIP2-207ENST00000487447 NHSQ6T4R5 1651 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms