RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 KCNH5Q8NCM2 988 aa30.54■■■□□ 2.48
RPL35-203ENST00000487431 RGPD3A6NKT7 1758 aaPredicted RBP30.54■■■□□ 2.48
RPL35-203ENST00000487431 RGPD4Q7Z3J3 1758 aa30.54■■■□□ 2.48
RPL35-203ENST00000487431 KTN1Q86UP2 1357 aaKnown RBP30.54■■■□□ 2.48
RPL35-203ENST00000487431 APBA3O96018 575 aa30.53■■■□□ 2.48
RPL35-203ENST00000487431 AXIN2Q9Y2T1 843 aa30.53■■■□□ 2.48
RPL35-203ENST00000487431 WDR17Q8IZU2 1322 aa30.52■■■□□ 2.48
RPL35-203ENST00000487431 C11orf95C9JLR9 678 aaPredicted RBP30.52■■■□□ 2.48
RPL35-203ENST00000487431 ZBTB7CA1YPR0 619 aa30.51■■■□□ 2.47
RPL35-203ENST00000487431 CD163L1Q9NR16 1453 aa30.5■■■□□ 2.47
RPL35-203ENST00000487431 R3HDM1Q15032 1099 aaKnown RBP30.5■■■□□ 2.47
RPL35-203ENST00000487431 CARD11Q9BXL7 1154 aa30.5■■■□□ 2.47
RPL35-203ENST00000487431 OVOS2A0A0G2JMS6 1433 aa30.49■■■□□ 2.47
RPL35-203ENST00000487431 OVOS2A0A0J9YW53 1432 aa30.49■■■□□ 2.47
RPL35-203ENST00000487431 OVOS2Q6IE36 1432 aa30.49■■■□□ 2.47
RPL35-203ENST00000487431 USP31Q70CQ4 1352 aa30.47■■■□□ 2.47
RPL35-203ENST00000487431 TOM1L2Q6ZVM7 507 aa30.47■■■□□ 2.47
RPL35-203ENST00000487431 LTN1O94822 1766 aa30.46■■■□□ 2.47
RPL35-203ENST00000487431 TONSLQ96HA7 1378 aa30.46■■■□□ 2.47
RPL35-203ENST00000487431 BCL9O00512 1426 aa30.43■■■□□ 2.46
RPL35-203ENST00000487431 DDB1Q16531 1140 aa30.43■■■□□ 2.46
RPL35-203ENST00000487431 CDCA7Q9BWT1 371 aaPredicted RBP30.43■■■□□ 2.46
RPL35-203ENST00000487431 CARD10Q9BWT7 1032 aa30.42■■■□□ 2.46
RPL35-203ENST00000487431 PUS7Q96PZ0 661 aaKnown RBP30.41■■■□□ 2.46
RPL35-203ENST00000487431 EDC4Q6P2E9 1401 aaKnown RBP30.39■■■□□ 2.45
RPL35-203ENST00000487431 SOX12O15370 315 aa30.38■■■□□ 2.45
RPL35-203ENST00000487431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.36■■■□□ 2.45
RPL35-203ENST00000487431 CCDC7Q96M83 1385 aa30.36■■■□□ 2.45
RPL35-203ENST00000487431 PLSCR1O15162 318 aa30.35■■■□□ 2.45
RPL35-203ENST00000487431 MARCH10Q8NA82 808 aaPredicted RBP30.35■■■□□ 2.45
RPL35-203ENST00000487431 SLC12A5Q9H2X9 1139 aa30.35■■■□□ 2.45
RPL35-203ENST00000487431 NBPF14Q5TI25 921 aa30.34■■■□□ 2.45
RPL35-203ENST00000487431 HDGFL2Q7Z4V5 671 aaPredicted RBP30.34■■■□□ 2.45
RPL35-203ENST00000487431 NME9Q86XW9 330 aa30.34■■■□□ 2.45
RPL35-203ENST00000487431 A0A1W2PP64 1363 aa30.33■■■□□ 2.45
RPL35-203ENST00000487431 CSB-PGBD3P0DP91 1061 aa30.33■■■□□ 2.45
RPL35-203ENST00000487431 TMC1Q8TDI8 760 aa30.33■■■□□ 2.45
RPL35-203ENST00000487431 BCL11BQ9C0K0 894 aaPredicted RBP30.33■■■□□ 2.45
RPL35-203ENST00000487431 TESK2Q96S53 571 aa30.31■■■□□ 2.44
RPL35-203ENST00000487431 TERF2IPQ9NYB0 399 aa30.31■■■□□ 2.44
RPL35-203ENST00000487431 TNS2Q63HR2 1409 aa30.3■■■□□ 2.44
RPL35-203ENST00000487431 NINLQ9Y2I6 1382 aa30.3■■■□□ 2.44
RPL35-203ENST00000487431 ERBB3P21860 1342 aa30.3■■■□□ 2.44
RPL35-203ENST00000487431 FAM208AQ9UK61 1670 aaKnown RBP30.28■■■□□ 2.44
RPL35-203ENST00000487431 NHSQ6T4R5 1651 aa30.27■■■□□ 2.44
RPL35-203ENST00000487431 PTF1AQ7RTS3 328 aa30.27■■■□□ 2.44
RPL35-203ENST00000487431 EXOC5O00471 708 aa30.26■■■□□ 2.43
RPL35-203ENST00000487431 CASZ1Q86V15 1759 aa30.26■■■□□ 2.43
RPL35-203ENST00000487431 ST20-MTHFSA0A0A6YYL1 179 aa30.24■■■□□ 2.43
RPL35-203ENST00000487431 SLC24A1O60721 1099 aa30.24■■■□□ 2.43
RPL35-203ENST00000487431 TRIM26Q12899 539 aaPredicted RBP30.21■■■□□ 2.43
RPL35-203ENST00000487431 PROM2Q8N271 834 aa30.2■■■□□ 2.43
RPL35-203ENST00000487431 ANKRD24Q8TF21 1146 aa30.19■■■□□ 2.42
RPL35-203ENST00000487431 NLRP2Q9NX02 1062 aa30.18■■■□□ 2.42
RPL35-203ENST00000487431 ANO8Q9HCE9 1232 aaPredicted RBP30.17■■■□□ 2.42
RPL35-203ENST00000487431 IL2RBP14784 551 aa30.16■■■□□ 2.42
RPL35-203ENST00000487431 BTAF1O14981 1849 aa30.16■■■□□ 2.42
RPL35-203ENST00000487431 IP6K1Q92551 441 aa30.15■■■□□ 2.42
RPL35-203ENST00000487431 ANKRD36BQ8N2N9 1353 aa30.15■■■□□ 2.42
RPL35-203ENST00000487431 KCNQ2O43526 872 aa30.14■■■□□ 2.42
RPL35-203ENST00000487431 SPON1Q9HCB6 807 aa30.14■■■□□ 2.42
RPL35-203ENST00000487431 RGPD2P0DJD1 1756 aa30.13■■■□□ 2.41
RPL35-203ENST00000487431 TXNRD1Q16881 649 aa30.12■■■□□ 2.41
RPL35-203ENST00000487431 COG3Q96JB2 828 aa30.1■■■□□ 2.41
RPL35-203ENST00000487431 USP47Q96K76 1375 aa30.1■■■□□ 2.41
RPL35-203ENST00000487431 PAPPAQ13219 1627 aa30.1■■■□□ 2.41
RPL35-203ENST00000487431 KAT6BQ8WYB5 2073 aa30.1■■■□□ 2.41
RPL35-203ENST00000487431 KIF20BQ96Q89 1820 aa30.08■■■□□ 2.41
RPL35-203ENST00000487431 SHANK3Q9BYB0 1731 aa30.08■■■□□ 2.41
RPL35-203ENST00000487431 MAP3K19Q56UN5 1328 aa30.07■■■□□ 2.4
RPL35-203ENST00000487431 HOXC9P31274 260 aa30.05■■■□□ 2.4
RPL35-203ENST00000487431 TMF1P82094 1093 aa30.05■■■□□ 2.4
RPL35-203ENST00000487431 MYOM1P52179 1685 aa30.04■■■□□ 2.4
RPL35-203ENST00000487431 RTL1A6NKG5 1358 aa30.03■■■□□ 2.4
RPL35-203ENST00000487431 ACSBG1Q96GR2 724 aa30.03■■■□□ 2.4
RPL35-203ENST00000487431 PDGFDQ9GZP0 370 aaPredicted RBP30.03■■■□□ 2.4
RPL35-203ENST00000487431 SLC15A2Q16348 729 aa30.02■■■□□ 2.4
RPL35-203ENST00000487431 STK32BQ9NY57 414 aa30.02■■■□□ 2.4
RPL35-203ENST00000487431 PPP1R1BQ9UD71 204 aaPredicted RBP30.02■■■□□ 2.4
RPL35-203ENST00000487431 DOT1LQ8TEK3 1739 aa30■■■□□ 2.39
RPL35-203ENST00000487431 FYB1O15117 783 aa30■■■□□ 2.39
RPL35-203ENST00000487431 QSER1Q2KHR3 1735 aa29.99■■■□□ 2.39
RPL35-203ENST00000487431 FBLN1P23142 703 aa29.99■■■□□ 2.39
RPL35-203ENST00000487431 LTV1Q96GA3 475 aaPredicted RBP29.99■■■□□ 2.39
RPL35-203ENST00000487431 AMPHP49418 695 aa29.98■■■□□ 2.39
RPL35-203ENST00000487431 LY75O60449 1722 aa29.96■■■□□ 2.39
RPL35-203ENST00000487431 CDCA8Q53HL2 280 aa29.96■■■□□ 2.39
RPL35-203ENST00000487431 TIMELESSQ9UNS1 1208 aa29.96■■■□□ 2.39
RPL35-203ENST00000487431 PTGER2P43116 358 aa29.95■■■□□ 2.39
RPL35-203ENST00000487431 MEGF6O75095 1541 aa29.95■■■□□ 2.38
RPL35-203ENST00000487431 ZBTB7AO95365 584 aa29.94■■■□□ 2.38
RPL35-203ENST00000487431 GGNBP2Q9H3C7 697 aa29.94■■■□□ 2.38
RPL35-203ENST00000487431 RRS1Q15050 365 aaKnown RBP29.92■■■□□ 2.38
RPL35-203ENST00000487431 DDX54Q8TDD1 881 aaKnown RBP29.92■■■□□ 2.38
RPL35-203ENST00000487431 KIF24Q5T7B8 1368 aa29.9■■■□□ 2.38
RPL35-203ENST00000487431 MTFR1LQ9H019 292 aa29.9■■■□□ 2.38
RPL35-203ENST00000487431 LRRC4BQ9NT99 713 aa29.9■■■□□ 2.38
RPL35-203ENST00000487431 COL24A1Q17RW2 1714 aa29.9■■■□□ 2.38
RPL35-203ENST00000487431 ANKRD26Q9UPS8 1709 aa29.9■■■□□ 2.38
RPL35-203ENST00000487431 CLSPNQ9HAW4 1339 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms