RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 TNNT2P45379 298 aaPredicted RBP26.33■■□□□ 1.81
PCOLCE-208ENST00000487172 PHF23Q9BUL5 403 aaPredicted RBP26.33■■□□□ 1.81
PCOLCE-208ENST00000487172 POLKQ9UBT6 870 aa26.33■■□□□ 1.81
PCOLCE-208ENST00000487172 RTL1A6NKG5 1358 aa26.33■■□□□ 1.8
PCOLCE-208ENST00000487172 NRAPQ86VF7 1730 aa26.32■■□□□ 1.8
PCOLCE-208ENST00000487172 AMPHP49418 695 aa26.32■■□□□ 1.8
PCOLCE-208ENST00000487172 RGS17Q9UGC6 210 aaPredicted RBP26.32■■□□□ 1.8
PCOLCE-208ENST00000487172 AXIN2Q9Y2T1 843 aa26.32■■□□□ 1.8
PCOLCE-208ENST00000487172 BLMP54132 1417 aaPredicted RBP26.31■■□□□ 1.8
PCOLCE-208ENST00000487172 HOXC9P31274 260 aa26.3■■□□□ 1.8
PCOLCE-208ENST00000487172 EMILIN1Q9Y6C2 1016 aa26.3■■□□□ 1.8
PCOLCE-208ENST00000487172 SMG6Q86US8 1419 aaKnown RBP26.3■■□□□ 1.8
PCOLCE-208ENST00000487172 RGPD5Q99666 1765 aa26.29■■□□□ 1.8
PCOLCE-208ENST00000487172 CNGB1Q14028 1251 aaPredicted RBP26.29■■□□□ 1.8
PCOLCE-208ENST00000487172 FLT4P35916 1363 aa26.29■■□□□ 1.8
PCOLCE-208ENST00000487172 PARD3Q8TEW0 1356 aa26.29■■□□□ 1.8
PCOLCE-208ENST00000487172 COL5A2P05997 1499 aaPredicted RBP26.29■■□□□ 1.8
PCOLCE-208ENST00000487172 PEAK1Q9H792 1746 aa26.28■■□□□ 1.8
PCOLCE-208ENST00000487172 EVA1CP58658 441 aa26.27■■□□□ 1.8
PCOLCE-208ENST00000487172 RALBP1Q15311 655 aa26.27■■□□□ 1.8
PCOLCE-208ENST00000487172 TRPC5Q9UL62 973 aaPredicted RBP26.27■■□□□ 1.8
PCOLCE-208ENST00000487172 ATRNO75882 1429 aa26.26■■□□□ 1.79
PCOLCE-208ENST00000487172 INSRP06213 1382 aa26.26■■□□□ 1.79
PCOLCE-208ENST00000487172 VPS72Q15906 364 aa26.26■■□□□ 1.79
PCOLCE-208ENST00000487172 QTRT2Q9H974 415 aaKnown RBP26.25■■□□□ 1.79
PCOLCE-208ENST00000487172 ERBB3P21860 1342 aa26.23■■□□□ 1.79
PCOLCE-208ENST00000487172 WDR17Q8IZU2 1322 aa26.23■■□□□ 1.79
PCOLCE-208ENST00000487172 HSP90AB2PQ58FF8 381 aa26.23■■□□□ 1.79
PCOLCE-208ENST00000487172 STRN4Q9NRL3 753 aa26.23■■□□□ 1.79
PCOLCE-208ENST00000487172 PPM1GO15355 546 aaPredicted RBP26.22■■□□□ 1.79
PCOLCE-208ENST00000487172 PPP2R1AP30153 589 aa26.22■■□□□ 1.79
PCOLCE-208ENST00000487172 MTHFSP49914 203 aa26.22■■□□□ 1.79
PCOLCE-208ENST00000487172 CDK12Q9NYV4 1490 aaPredicted RBP26.22■■□□□ 1.79
PCOLCE-208ENST00000487172 LARP1Q6PKG0 1096 aaKnown RBP26.21■■□□□ 1.79
PCOLCE-208ENST00000487172 ANKRD24Q8TF21 1146 aa26.21■■□□□ 1.79
PCOLCE-208ENST00000487172 POTEAQ6S8J7 498 aa26.2■■□□□ 1.78
PCOLCE-208ENST00000487172 GJD4Q96KN9 370 aaPredicted RBP26.2■■□□□ 1.78
PCOLCE-208ENST00000487172 PRKRIP1Q9H875 184 aaPredicted RBP26.2■■□□□ 1.78
PCOLCE-208ENST00000487172 CRB1P82279 1406 aa26.19■■□□□ 1.78
PCOLCE-208ENST00000487172 SPATA31A5Q5VU36 1347 aa26.18■■□□□ 1.78
PCOLCE-208ENST00000487172 SPATA31A7Q8IWB4 1347 aa26.18■■□□□ 1.78
PCOLCE-208ENST00000487172 CSB-PGBD3P0DP91 1061 aa26.17■■□□□ 1.78
PCOLCE-208ENST00000487172 RBM6P78332 1123 aaKnown RBP26.17■■□□□ 1.78
PCOLCE-208ENST00000487172 TOM1L2Q6ZVM7 507 aa26.17■■□□□ 1.78
PCOLCE-208ENST00000487172 FAM208AQ9UK61 1670 aaKnown RBP26.17■■□□□ 1.78
PCOLCE-208ENST00000487172 SPATA31A1Q5TZJ5 1347 aa26.16■■□□□ 1.78
PCOLCE-208ENST00000487172 CARD10Q9BWT7 1032 aa26.16■■□□□ 1.78
PCOLCE-208ENST00000487172 LTV1Q96GA3 475 aaPredicted RBP26.15■■□□□ 1.78
PCOLCE-208ENST00000487172 CCDC9Q9Y3X0 531 aaKnown RBP26.15■■□□□ 1.78
PCOLCE-208ENST00000487172 RXRBP28702 533 aa26.14■■□□□ 1.78
PCOLCE-208ENST00000487172 THRAP3Q9Y2W1 955 aaKnown RBP26.14■■□□□ 1.78
PCOLCE-208ENST00000487172 GLI3P10071 1580 aa26.14■■□□□ 1.78
PCOLCE-208ENST00000487172 MYBBP1AQ9BQG0 1328 aaKnown RBP26.14■■□□□ 1.77
PCOLCE-208ENST00000487172 EIF4A2Q14240 407 aaKnown RBP26.12■■□□□ 1.77
PCOLCE-208ENST00000487172 NLRP2Q9NX02 1062 aa26.12■■□□□ 1.77
PCOLCE-208ENST00000487172 ANP32CO43423 234 aa26.11■■□□□ 1.77
PCOLCE-208ENST00000487172 ONECUT3O60422 494 aaPredicted RBP26.11■■□□□ 1.77
PCOLCE-208ENST00000487172 TCP11L2Q8N4U5 519 aa26.11■■□□□ 1.77
PCOLCE-208ENST00000487172 BARGINQ6ZT62 677 aa26.1■■□□□ 1.77
PCOLCE-208ENST00000487172 CFAP53Q96M91 514 aa26.1■■□□□ 1.77
PCOLCE-208ENST00000487172 IL13P35225 146 aa26.09■■□□□ 1.77
PCOLCE-208ENST00000487172 NBPF6Q5VWK0 638 aa26.09■■□□□ 1.77
PCOLCE-208ENST00000487172 NBPF4Q96M43 638 aa26.09■■□□□ 1.77
PCOLCE-208ENST00000487172 COL3A1P02461 1466 aaPredicted RBP26.09■■□□□ 1.77
PCOLCE-208ENST00000487172 RGPD2P0DJD1 1756 aa26.08■■□□□ 1.77
PCOLCE-208ENST00000487172 USP35Q9P2H5 1018 aa26.08■■□□□ 1.77
PCOLCE-208ENST00000487172 DIAPH1O60610 1272 aaKnown RBP26.07■■□□□ 1.76
PCOLCE-208ENST00000487172 EYA1Q99502 592 aa26.06■■□□□ 1.76
PCOLCE-208ENST00000487172 NCAPD2Q15021 1401 aa26.05■■□□□ 1.76
PCOLCE-208ENST00000487172 FAM98CQ17RN3 349 aaKnown RBP26.04■■□□□ 1.76
PCOLCE-208ENST00000487172 CDCA7Q9BWT1 371 aaPredicted RBP26.04■■□□□ 1.76
PCOLCE-208ENST00000487172 IGSF1Q8N6C5 1336 aa26.04■■□□□ 1.76
PCOLCE-208ENST00000487172 RGPD1P0DJD0 1748 aa26.02■■□□□ 1.76
PCOLCE-208ENST00000487172 DISP2A7MBM2 1401 aa26.02■■□□□ 1.76
PCOLCE-208ENST00000487172 WNK3Q9BYP7 1800 aa26.01■■□□□ 1.75
PCOLCE-208ENST00000487172 THSD7AQ9UPZ6 1657 aa26.01■■□□□ 1.75
PCOLCE-208ENST00000487172 IL2RBP14784 551 aa26■■□□□ 1.75
PCOLCE-208ENST00000487172 DIEXFQ68CQ4 756 aaKnown RBP26■■□□□ 1.75
PCOLCE-208ENST00000487172 SEPT12Q8IYM1 358 aa25.99■■□□□ 1.75
PCOLCE-208ENST00000487172 USHBP1Q8N6Y0 703 aa25.99■■□□□ 1.75
PCOLCE-208ENST00000487172 NUDCQ9Y266 331 aa25.99■■□□□ 1.75
PCOLCE-208ENST00000487172 RGS12O14924 1447 aa25.97■■□□□ 1.75
PCOLCE-208ENST00000487172 PARP4Q9UKK3 1724 aaKnown RBP25.97■■□□□ 1.75
PCOLCE-208ENST00000487172 KDRP35968 1356 aa25.96■■□□□ 1.75
PCOLCE-208ENST00000487172 PLEKHG2Q9H7P9 1386 aa25.95■■□□□ 1.75
PCOLCE-208ENST00000487172 RAPGEF4Q8WZA2 1011 aa25.95■■□□□ 1.74
PCOLCE-208ENST00000487172 SULT6B1Q6IMI4 303 aa25.94■■□□□ 1.74
PCOLCE-208ENST00000487172 U2SURPO15042 1029 aaKnown RBP25.93■■□□□ 1.74
PCOLCE-208ENST00000487172 TATP17735 454 aaPredicted RBP25.93■■□□□ 1.74
PCOLCE-208ENST00000487172 MEGF6O75095 1541 aa25.93■■□□□ 1.74
PCOLCE-208ENST00000487172 A0A0G2JS52 829 aa25.92■■□□□ 1.74
PCOLCE-208ENST00000487172 MYT1Q01538 1121 aa25.92■■□□□ 1.74
PCOLCE-208ENST00000487172 DDB1Q16531 1140 aa25.92■■□□□ 1.74
PCOLCE-208ENST00000487172 OVOS2A0A0G2JMS6 1433 aa25.91■■□□□ 1.74
PCOLCE-208ENST00000487172 EXOC5O00471 708 aa25.91■■□□□ 1.74
PCOLCE-208ENST00000487172 AEBP1Q8IUX7 1158 aa25.91■■□□□ 1.74
PCOLCE-208ENST00000487172 LRRC37A3O60309 1634 aa25.9■■□□□ 1.74
PCOLCE-208ENST00000487172 BRWD3Q6RI45 1802 aa25.9■■□□□ 1.74
PCOLCE-208ENST00000487172 HMOX1P09601 288 aa25.89■■□□□ 1.74
PCOLCE-208ENST00000487172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms