RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 COL18A1P39060 1754 aa14.19□□□□□ -0.14
NEK4-204ENST00000487068 VPS72Q15906 364 aa14.18□□□□□ -0.14
NEK4-204ENST00000487068 NME9Q86XW9 330 aa14.18□□□□□ -0.14
NEK4-204ENST00000487068 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
NEK4-204ENST00000487068 CPDO75976 1380 aa14.17□□□□□ -0.14
NEK4-204ENST00000487068 CAMTA1Q9Y6Y1 1673 aa14.17□□□□□ -0.14
NEK4-204ENST00000487068 EVA1CP58658 441 aa14.16□□□□□ -0.14
NEK4-204ENST00000487068 KRT27Q7Z3Y8 459 aa14.16□□□□□ -0.14
NEK4-204ENST00000487068 MAP2P11137 1827 aaKnown RBP14.15□□□□□ -0.14
NEK4-204ENST00000487068 FAM208AQ9UK61 1670 aaKnown RBP14.15□□□□□ -0.14
NEK4-204ENST00000487068 ZBTB22O15209 634 aa14.15□□□□□ -0.14
NEK4-204ENST00000487068 OVOS2A0A0J9YW53 1432 aa14.15□□□□□ -0.14
NEK4-204ENST00000487068 OVOS2Q6IE36 1432 aa14.15□□□□□ -0.14
NEK4-204ENST00000487068 NSD3Q9BZ95 1437 aa14.15□□□□□ -0.14
NEK4-204ENST00000487068 COL5A2P05997 1499 aaPredicted RBP14.14□□□□□ -0.15
NEK4-204ENST00000487068 ONECUT3O60422 494 aaPredicted RBP14.14□□□□□ -0.15
NEK4-204ENST00000487068 BAG6P46379 1132 aa14.14□□□□□ -0.15
NEK4-204ENST00000487068 ABCC6O95255 1503 aa14.14□□□□□ -0.15
NEK4-204ENST00000487068 USP31Q70CQ4 1352 aa14.13□□□□□ -0.15
NEK4-204ENST00000487068 COG3Q96JB2 828 aa14.13□□□□□ -0.15
NEK4-204ENST00000487068 USP35Q9P2H5 1018 aa14.13□□□□□ -0.15
NEK4-204ENST00000487068 RGPD2P0DJD1 1756 aa14.13□□□□□ -0.15
NEK4-204ENST00000487068 THSD7AQ9UPZ6 1657 aa14.13□□□□□ -0.15
NEK4-204ENST00000487068 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
NEK4-204ENST00000487068 AATKQ6ZMQ8 1374 aa14.11□□□□□ -0.15
NEK4-204ENST00000487068 PSDA5PKW4 1024 aaPredicted RBP14.11□□□□□ -0.15
NEK4-204ENST00000487068 FAM98CQ17RN3 349 aaKnown RBP14.11□□□□□ -0.15
NEK4-204ENST00000487068 PARP4Q9UKK3 1724 aaKnown RBP14.11□□□□□ -0.15
NEK4-204ENST00000487068 CSB-PGBD3P0DP91 1061 aa14.1□□□□□ -0.15
NEK4-204ENST00000487068 GGNBP2Q9H3C7 697 aa14.1□□□□□ -0.15
NEK4-204ENST00000487068 SPATA31A5Q5VU36 1347 aa14.1□□□□□ -0.15
NEK4-204ENST00000487068 SPATA31A7Q8IWB4 1347 aa14.1□□□□□ -0.15
NEK4-204ENST00000487068 CRB1P82279 1406 aa14.09□□□□□ -0.15
NEK4-204ENST00000487068 LRRC37A3O60309 1634 aa14.08□□□□□ -0.15
NEK4-204ENST00000487068 KAT6BQ8WYB5 2073 aa14.08□□□□□ -0.15
NEK4-204ENST00000487068 LARP1Q6PKG0 1096 aaKnown RBP14.08□□□□□ -0.16
NEK4-204ENST00000487068 TOM1L2Q6ZVM7 507 aa14.08□□□□□ -0.16
NEK4-204ENST00000487068 ARHGEF25Q86VW2 580 aa14.08□□□□□ -0.16
NEK4-204ENST00000487068 SPATA31A1Q5TZJ5 1347 aa14.08□□□□□ -0.16
NEK4-204ENST00000487068 CGNL1Q0VF96 1302 aa14.07□□□□□ -0.16
NEK4-204ENST00000487068 EN1Q05925 392 aaPredicted RBP14.06□□□□□ -0.16
NEK4-204ENST00000487068 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
NEK4-204ENST00000487068 KIF7Q2M1P5 1343 aa14.06□□□□□ -0.16
NEK4-204ENST00000487068 PEAK1Q9H792 1746 aa14.06□□□□□ -0.16
NEK4-204ENST00000487068 TNS1Q9HBL0 1735 aaKnown RBP14.06□□□□□ -0.16
NEK4-204ENST00000487068 FYB1O15117 783 aa14.05□□□□□ -0.16
NEK4-204ENST00000487068 MSH5O43196 834 aa14.05□□□□□ -0.16
NEK4-204ENST00000487068 AMPHP49418 695 aa14.05□□□□□ -0.16
NEK4-204ENST00000487068 WDR17Q8IZU2 1322 aa14.05□□□□□ -0.16
NEK4-204ENST00000487068 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
NEK4-204ENST00000487068 TCP11L2Q8N4U5 519 aa14.04□□□□□ -0.16
NEK4-204ENST00000487068 CARD14Q9BXL6 1004 aa14.04□□□□□ -0.16
NEK4-204ENST00000487068 AXIN2Q9Y2T1 843 aa14.04□□□□□ -0.16
NEK4-204ENST00000487068 DISP2A7MBM2 1401 aa14.04□□□□□ -0.16
NEK4-204ENST00000487068 SBF2Q86WG5 1849 aa14.04□□□□□ -0.16
NEK4-204ENST00000487068 PANK3Q9H999 370 aa14.03□□□□□ -0.16
NEK4-204ENST00000487068 SMG6Q86US8 1419 aaKnown RBP14.03□□□□□ -0.16
NEK4-204ENST00000487068 RTL1A6NKG5 1358 aa14.02□□□□□ -0.17
NEK4-204ENST00000487068 ERBB3P21860 1342 aa14.02□□□□□ -0.17
NEK4-204ENST00000487068 MAP3K19Q56UN5 1328 aa14.02□□□□□ -0.17
NEK4-204ENST00000487068 R3HDM1Q15032 1099 aaKnown RBP14.02□□□□□ -0.17
NEK4-204ENST00000487068 RRS1Q15050 365 aaKnown RBP14.02□□□□□ -0.17
NEK4-204ENST00000487068 FAM182BQ5T319 152 aa14.02□□□□□ -0.17
NEK4-204ENST00000487068 LTV1Q96GA3 475 aaPredicted RBP14.02□□□□□ -0.17
NEK4-204ENST00000487068 CCDC7Q96M83 1385 aa14.01□□□□□ -0.17
NEK4-204ENST00000487068 FBLN1P23142 703 aa14.01□□□□□ -0.17
NEK4-204ENST00000487068 ANKRD24Q8TF21 1146 aa14.01□□□□□ -0.17
NEK4-204ENST00000487068 NLRP2Q9NX02 1062 aa14.01□□□□□ -0.17
NEK4-204ENST00000487068 THRAP3Q9Y2W1 955 aaKnown RBP14.01□□□□□ -0.17
NEK4-204ENST00000487068 NSD2O96028 1365 aa14□□□□□ -0.17
NEK4-204ENST00000487068 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
NEK4-204ENST00000487068 BARGINQ6ZT62 677 aa14□□□□□ -0.17
NEK4-204ENST00000487068 KNSTRNQ9Y448 316 aa14□□□□□ -0.17
NEK4-204ENST00000487068 PPM1GO15355 546 aaPredicted RBP13.99□□□□□ -0.17
NEK4-204ENST00000487068 HOXC9P31274 260 aa13.99□□□□□ -0.17
NEK4-204ENST00000487068 PDE3BQ13370 1112 aa13.99□□□□□ -0.17
NEK4-204ENST00000487068 EZH2Q15910 746 aaKnown RBP13.99□□□□□ -0.17
NEK4-204ENST00000487068 FLT4P35916 1363 aa13.98□□□□□ -0.17
NEK4-204ENST00000487068 IP6K1Q92551 441 aa13.98□□□□□ -0.17
NEK4-204ENST00000487068 CARD10Q9BWT7 1032 aa13.98□□□□□ -0.17
NEK4-204ENST00000487068 WASHC2AQ641Q2 1341 aa13.97□□□□□ -0.17
NEK4-204ENST00000487068 CNGB1Q14028 1251 aaPredicted RBP13.97□□□□□ -0.17
NEK4-204ENST00000487068 PARD3Q8TEW0 1356 aa13.96□□□□□ -0.17
NEK4-204ENST00000487068 SHANK3Q9BYB0 1731 aa13.96□□□□□ -0.17
NEK4-204ENST00000487068 RREB1Q92766 1687 aa13.96□□□□□ -0.17
NEK4-204ENST00000487068 TRIM37O94972 964 aa13.96□□□□□ -0.17
NEK4-204ENST00000487068 DDB1Q16531 1140 aa13.96□□□□□ -0.17
NEK4-204ENST00000487068 FAM196AQ6ZSG2 479 aa13.96□□□□□ -0.17
NEK4-204ENST00000487068 EMILIN1Q9Y6C2 1016 aa13.96□□□□□ -0.17
NEK4-204ENST00000487068 TNS2Q63HR2 1409 aa13.96□□□□□ -0.18
NEK4-204ENST00000487068 MORC1Q86VD1 984 aa13.95□□□□□ -0.18
NEK4-204ENST00000487068 CAMKK2Q96RR4 588 aa13.95□□□□□ -0.18
NEK4-204ENST00000487068 CDCA7Q9BWT1 371 aaPredicted RBP13.95□□□□□ -0.18
NEK4-204ENST00000487068 OVOS2A0A0G2JMS6 1433 aa13.95□□□□□ -0.18
NEK4-204ENST00000487068 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
NEK4-204ENST00000487068 KIF24Q5T7B8 1368 aa13.95□□□□□ -0.18
NEK4-204ENST00000487068 APBA3O96018 575 aa13.94□□□□□ -0.18
NEK4-204ENST00000487068 NUP188Q5SRE5 1749 aa13.94□□□□□ -0.18
NEK4-204ENST00000487068 INSRP06213 1382 aa13.94□□□□□ -0.18
NEK4-204ENST00000487068 IL2RBP14784 551 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms