RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 SOS2Q07890 1332 aaPredicted RBP9.09□□□□□ -0.95
SNRNP40-205ENST00000486941 CBLBQ13191 982 aa9.09□□□□□ -0.95
SNRNP40-205ENST00000486941 GPKOWQ92917 476 aaPredicted RBP eCLIP9.09□□□□□ -0.95
SNRNP40-205ENST00000486941 CCDC116Q8IYX3 515 aa9.08□□□□□ -0.96
SNRNP40-205ENST00000486941 IRF7Q92985 503 aa9.08□□□□□ -0.96
SNRNP40-205ENST00000486941 AP1G2O75843 785 aa9.07□□□□□ -0.96
SNRNP40-205ENST00000486941 BMP2P12643 396 aa9.07□□□□□ -0.96
SNRNP40-205ENST00000486941 PPP1R26Q5T8A7 1209 aaPredicted RBP9.07□□□□□ -0.96
SNRNP40-205ENST00000486941 DDRGK1Q96HY6 314 aa9.07□□□□□ -0.96
SNRNP40-205ENST00000486941 VSIG8P0DPA2 414 aa9.06□□□□□ -0.96
SNRNP40-205ENST00000486941 ARHGAP9Q9BRR9 750 aa9.06□□□□□ -0.96
SNRNP40-205ENST00000486941 PPFIA3O75145 1194 aa9.05□□□□□ -0.96
SNRNP40-205ENST00000486941 Q6ZVU0 165 aa9.05□□□□□ -0.96
SNRNP40-205ENST00000486941 BCANQ96GW7 911 aa9.05□□□□□ -0.96
SNRNP40-205ENST00000486941 KCTD15Q96SI1 283 aaPredicted RBP9.05□□□□□ -0.96
SNRNP40-205ENST00000486941 EMILIN1Q9Y6C2 1016 aa9.05□□□□□ -0.96
SNRNP40-205ENST00000486941 MAN1A2O60476 641 aa9.04□□□□□ -0.96
SNRNP40-205ENST00000486941 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
SNRNP40-205ENST00000486941 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
SNRNP40-205ENST00000486941 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
SNRNP40-205ENST00000486941 USP17L8P0C7I0 530 aa9.03□□□□□ -0.96
SNRNP40-205ENST00000486941 RFC5P40937 340 aa9.03□□□□□ -0.96
SNRNP40-205ENST00000486941 GPR161Q8N6U8 529 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-205ENST00000486941 ZSCAN1Q8NBB4 408 aa9.02□□□□□ -0.97
SNRNP40-205ENST00000486941 AGBL1Q96MI9 1066 aa9.02□□□□□ -0.97
SNRNP40-205ENST00000486941 KDF1Q8NAX2 398 aaPredicted RBP9.01□□□□□ -0.97
SNRNP40-205ENST00000486941 TSEN34Q9BSV6 310 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-205ENST00000486941 TMPRSS4Q9NRS4 437 aa9.01□□□□□ -0.97
SNRNP40-205ENST00000486941 ZC3H4Q9UPT8 1303 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-205ENST00000486941 FIGNL2A6NMB9 653 aa9□□□□□ -0.97
SNRNP40-205ENST00000486941 SPINT1O43278 529 aa9□□□□□ -0.97
SNRNP40-205ENST00000486941 ZBTB33Q86T24 672 aa9□□□□□ -0.97
SNRNP40-205ENST00000486941 TTLL8A6PVC2 850 aa8.99□□□□□ -0.97
SNRNP40-205ENST00000486941 ADD1P35611 737 aaKnown RBP8.99□□□□□ -0.97
SNRNP40-205ENST00000486941 KRT76Q01546 638 aa8.99□□□□□ -0.97
SNRNP40-205ENST00000486941 PTK2Q05397 1052 aa8.99□□□□□ -0.97
SNRNP40-205ENST00000486941 SLC10A4Q96EP9 437 aa8.99□□□□□ -0.97
SNRNP40-205ENST00000486941 LILRA1O75019 489 aa8.98□□□□□ -0.97
SNRNP40-205ENST00000486941 UPP2O95045 317 aa8.98□□□□□ -0.97
SNRNP40-205ENST00000486941 CTSOP43234 321 aaPredicted RBP8.98□□□□□ -0.97
SNRNP40-205ENST00000486941 ATP1B4Q9UN42 357 aaPredicted RBP8.98□□□□□ -0.97
SNRNP40-205ENST00000486941 GPSM3Q9Y4H4 160 aa8.98□□□□□ -0.97
SNRNP40-205ENST00000486941 PTSQ03393 145 aa8.97□□□□□ -0.97
SNRNP40-205ENST00000486941 GJD4Q96KN9 370 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-205ENST00000486941 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
SNRNP40-205ENST00000486941 IL27Q8NEV9 243 aa8.96□□□□□ -0.98
SNRNP40-205ENST00000486941 GOPCQ9HD26 462 aa8.96□□□□□ -0.98
SNRNP40-205ENST00000486941 ESPNB1AK53 854 aa8.95□□□□□ -0.98
SNRNP40-205ENST00000486941 ERVH48-1M5A8F1 160 aa8.95□□□□□ -0.98
SNRNP40-205ENST00000486941 ZNF784Q8NCA9 323 aaPredicted RBP8.95□□□□□ -0.98
SNRNP40-205ENST00000486941 INSM2Q96T92 566 aaPredicted RBP8.95□□□□□ -0.98
SNRNP40-205ENST00000486941 CDV3Q9UKY7 258 aaKnown RBP8.95□□□□□ -0.98
SNRNP40-205ENST00000486941 RAB15P59190 212 aa8.94□□□□□ -0.98
SNRNP40-205ENST00000486941 RELBQ01201 579 aa8.94□□□□□ -0.98
SNRNP40-205ENST00000486941 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.94□□□□□ -0.98
SNRNP40-205ENST00000486941 ZNF395Q9H8N7 513 aaPredicted RBP8.94□□□□□ -0.98
SNRNP40-205ENST00000486941 GPR37L1O60883 481 aa8.93□□□□□ -0.98
SNRNP40-205ENST00000486941 SENP3-EIF4A1A0A087X0R7 540 aa8.92□□□□□ -0.98
SNRNP40-205ENST00000486941 SLC35F4A4IF30 521 aa8.92□□□□□ -0.98
SNRNP40-205ENST00000486941 SLC24A1O60721 1099 aa8.92□□□□□ -0.98
SNRNP40-205ENST00000486941 DHX9Q08211 1270 aaKnown RBP8.92□□□□□ -0.98
SNRNP40-205ENST00000486941 CCDC155Q8N6L0 562 aa8.92□□□□□ -0.98
SNRNP40-205ENST00000486941 BRPF1P55201 1214 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-205ENST00000486941 NEUROD2Q15784 382 aa8.91□□□□□ -0.98
SNRNP40-205ENST00000486941 FOXD4L5Q5VV16 416 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-205ENST00000486941 FBXO45P0C2W1 286 aa8.9□□□□□ -0.98
SNRNP40-205ENST00000486941 RNFT1Q5M7Z0 435 aa8.9□□□□□ -0.98
SNRNP40-205ENST00000486941 DZIP3Q86Y13 1208 aaKnown RBP8.9□□□□□ -0.98
SNRNP40-205ENST00000486941 RNF217Q8TC41 542 aa8.9□□□□□ -0.98
SNRNP40-205ENST00000486941 PCMTD1Q96MG8 357 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-205ENST00000486941 ADH1AP07327 375 aa8.89□□□□□ -0.99
SNRNP40-205ENST00000486941 GSK3AP49840 483 aa8.89□□□□□ -0.99
SNRNP40-205ENST00000486941 TMEM259Q4ZIN3 620 aa8.89□□□□□ -0.99
SNRNP40-205ENST00000486941 NANOS1Q8WY41 292 aaKnown RBP8.89□□□□□ -0.99
SNRNP40-205ENST00000486941 ABCC9O60706 1549 aa8.89□□□□□ -0.99
SNRNP40-205ENST00000486941 GIGYF1O75420 1035 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-205ENST00000486941 PTGIRP43119 386 aa8.88□□□□□ -0.99
SNRNP40-205ENST00000486941 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
SNRNP40-205ENST00000486941 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
SNRNP40-205ENST00000486941 CNTNAP3Q9BZ76 1288 aa8.88□□□□□ -0.99
SNRNP40-205ENST00000486941 CYLDQ9NQC7 956 aa8.87□□□□□ -0.99
SNRNP40-205ENST00000486941 CUEDC1Q9NWM3 386 aaPredicted RBP8.87□□□□□ -0.99
SNRNP40-205ENST00000486941 VWA5B2Q8N398 1253 aa8.86□□□□□ -0.99
SNRNP40-205ENST00000486941 COL25A1Q9BXS0 654 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-205ENST00000486941 POLMQ9NP87 494 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-205ENST00000486941 CCDC180Q9P1Z9 1646 aa8.86□□□□□ -0.99
SNRNP40-205ENST00000486941 ZBBXA8MT70 800 aa8.85□□□□□ -0.99
SNRNP40-205ENST00000486941 ITGA6P23229 1130 aa8.85□□□□□ -0.99
SNRNP40-205ENST00000486941 FAM181BA6NEQ2 426 aa8.84□□□□□ -0.99
SNRNP40-205ENST00000486941 MTMR14Q8NCE2 650 aa8.84□□□□□ -0.99
SNRNP40-205ENST00000486941 WHAMMQ8TF30 809 aa8.84□□□□□ -0.99
SNRNP40-205ENST00000486941 SNRKQ9NRH2 765 aa8.84□□□□□ -0.99
SNRNP40-205ENST00000486941 PCDHB9Q9Y5E1 797 aa8.83□□□□□ -1
SNRNP40-205ENST00000486941 SEPT12Q8IYM1 358 aa8.82□□□□□ -1
SNRNP40-205ENST00000486941 PNMA1Q8ND90 353 aa8.82□□□□□ -1
SNRNP40-205ENST00000486941 SCTRP47872 440 aa8.81□□□□□ -1
SNRNP40-205ENST00000486941 RHOQP17081 205 aa8.8□□□□□ -1
SNRNP40-205ENST00000486941 ZNF385CQ66K41 422 aaPredicted RBP8.8□□□□□ -1
SNRNP40-205ENST00000486941 RNF144AP50876 292 aaPredicted RBP8.79□□□□□ -1
SNRNP40-205ENST00000486941 ERVK-9P63128 1117 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms