RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 PLSCR1O15162 318 aa28.8■■■□□ 2.2
PHF1-208ENST00000486845 CDCA7Q9BWT1 371 aaPredicted RBP28.8■■■□□ 2.2
PHF1-208ENST00000486845 KCNH5Q8NCM2 988 aa28.79■■■□□ 2.2
PHF1-208ENST00000486845 ZNF692Q9BU19 519 aaPredicted RBP28.79■■■□□ 2.2
PHF1-208ENST00000486845 PPP1R1BQ9UD71 204 aaPredicted RBP28.79■■■□□ 2.2
PHF1-208ENST00000486845 KCNQ2O43526 872 aa28.78■■■□□ 2.2
PHF1-208ENST00000486845 AXIN2Q9Y2T1 843 aa28.78■■■□□ 2.2
PHF1-208ENST00000486845 TTC21BQ7Z4L5 1316 aa28.77■■■□□ 2.2
PHF1-208ENST00000486845 ARHGEF25Q86VW2 580 aa28.77■■■□□ 2.2
PHF1-208ENST00000486845 BCL11BQ9C0K0 894 aaPredicted RBP28.77■■■□□ 2.2
PHF1-208ENST00000486845 AKAP12Q02952 1782 aa28.77■■■□□ 2.2
PHF1-208ENST00000486845 TTC21AQ8NDW8 1320 aa28.75■■■□□ 2.19
PHF1-208ENST00000486845 BCL9O00512 1426 aa28.75■■■□□ 2.19
PHF1-208ENST00000486845 ROCK2O75116 1388 aaKnown RBP28.75■■■□□ 2.19
PHF1-208ENST00000486845 NINLQ9Y2I6 1382 aa28.74■■■□□ 2.19
PHF1-208ENST00000486845 MARCH10Q8NA82 808 aaPredicted RBP28.73■■■□□ 2.19
PHF1-208ENST00000486845 CARD10Q9BWT7 1032 aa28.73■■■□□ 2.19
PHF1-208ENST00000486845 RGPD5Q99666 1765 aa28.73■■■□□ 2.19
PHF1-208ENST00000486845 CSB-PGBD3P0DP91 1061 aa28.72■■■□□ 2.19
PHF1-208ENST00000486845 SOX12O15370 315 aa28.71■■■□□ 2.19
PHF1-208ENST00000486845 NFAT5O94916 1531 aa28.7■■■□□ 2.19
PHF1-208ENST00000486845 ANO8Q9HCE9 1232 aaPredicted RBP28.7■■■□□ 2.18
PHF1-208ENST00000486845 ABCC6O95255 1503 aa28.69■■■□□ 2.18
PHF1-208ENST00000486845 PTF1AQ7RTS3 328 aa28.69■■■□□ 2.18
PHF1-208ENST00000486845 KTN1Q86UP2 1357 aaKnown RBP28.69■■■□□ 2.18
PHF1-208ENST00000486845 CASZ1Q86V15 1759 aa28.68■■■□□ 2.18
PHF1-208ENST00000486845 DCAF8L1A6NGE4 600 aa28.68■■■□□ 2.18
PHF1-208ENST00000486845 YY1P25490 414 aa28.68■■■□□ 2.18
PHF1-208ENST00000486845 CCDC7Q96M83 1385 aa28.67■■■□□ 2.18
PHF1-208ENST00000486845 SIN3AQ96ST3 1273 aa28.67■■■□□ 2.18
PHF1-208ENST00000486845 EXOC5O00471 708 aa28.65■■■□□ 2.18
PHF1-208ENST00000486845 MON2Q7Z3U7 1717 aa28.65■■■□□ 2.18
PHF1-208ENST00000486845 PROM2Q8N271 834 aa28.64■■■□□ 2.18
PHF1-208ENST00000486845 NEUROD1Q13562 356 aa28.63■■■□□ 2.17
PHF1-208ENST00000486845 TNS2Q63HR2 1409 aa28.62■■■□□ 2.17
PHF1-208ENST00000486845 SBNO2Q9Y2G9 1366 aa28.61■■■□□ 2.17
PHF1-208ENST00000486845 TXNRD1Q16881 649 aa28.6■■■□□ 2.17
PHF1-208ENST00000486845 USP54Q70EL1 1684 aa28.6■■■□□ 2.17
PHF1-208ENST00000486845 USP31Q70CQ4 1352 aa28.6■■■□□ 2.17
PHF1-208ENST00000486845 STK32BQ9NY57 414 aa28.59■■■□□ 2.17
PHF1-208ENST00000486845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.57■■■□□ 2.16
PHF1-208ENST00000486845 PDGFDQ9GZP0 370 aaPredicted RBP28.57■■■□□ 2.16
PHF1-208ENST00000486845 ZBTB7AO95365 584 aa28.56■■■□□ 2.16
PHF1-208ENST00000486845 NHSQ6T4R5 1651 aa28.56■■■□□ 2.16
PHF1-208ENST00000486845 ERBB3P21860 1342 aa28.55■■■□□ 2.16
PHF1-208ENST00000486845 SLC15A2Q16348 729 aa28.54■■■□□ 2.16
PHF1-208ENST00000486845 NLRP2Q9NX02 1062 aa28.53■■■□□ 2.16
PHF1-208ENST00000486845 MYOM1P52179 1685 aa28.53■■■□□ 2.16
PHF1-208ENST00000486845 CD163L1Q9NR16 1453 aa28.53■■■□□ 2.16
PHF1-208ENST00000486845 LTN1O94822 1766 aa28.52■■■□□ 2.16
PHF1-208ENST00000486845 PTGER2P43116 358 aa28.52■■■□□ 2.16
PHF1-208ENST00000486845 NME9Q86XW9 330 aa28.52■■■□□ 2.16
PHF1-208ENST00000486845 IL2RBP14784 551 aa28.5■■■□□ 2.15
PHF1-208ENST00000486845 HDGFL2Q7Z4V5 671 aaPredicted RBP28.5■■■□□ 2.15
PHF1-208ENST00000486845 CARD11Q9BXL7 1154 aa28.5■■■□□ 2.15
PHF1-208ENST00000486845 ATF5Q9Y2D1 282 aaPredicted RBP28.5■■■□□ 2.15
PHF1-208ENST00000486845 TMC1Q8TDI8 760 aa28.49■■■□□ 2.15
PHF1-208ENST00000486845 ACSBG1Q96GR2 724 aa28.48■■■□□ 2.15
PHF1-208ENST00000486845 EDC4Q6P2E9 1401 aaKnown RBP28.48■■■□□ 2.15
PHF1-208ENST00000486845 ANKRD24Q8TF21 1146 aa28.47■■■□□ 2.15
PHF1-208ENST00000486845 MTFR1LQ9H019 292 aa28.47■■■□□ 2.15
PHF1-208ENST00000486845 TERF2IPQ9NYB0 399 aa28.45■■■□□ 2.14
PHF1-208ENST00000486845 BTAF1O14981 1849 aa28.44■■■□□ 2.14
PHF1-208ENST00000486845 SLC12A5Q9H2X9 1139 aa28.44■■■□□ 2.14
PHF1-208ENST00000486845 PAPPAQ13219 1627 aa28.43■■■□□ 2.14
PHF1-208ENST00000486845 A0A1W2PP64 1363 aa28.41■■■□□ 2.14
PHF1-208ENST00000486845 FHDC1Q9C0D6 1143 aaPredicted RBP28.41■■■□□ 2.14
PHF1-208ENST00000486845 PUS7Q96PZ0 661 aaKnown RBP28.4■■■□□ 2.14
PHF1-208ENST00000486845 SGIP1Q9BQI5 828 aa28.4■■■□□ 2.14
PHF1-208ENST00000486845 SYT17Q9BSW7 474 aa28.4■■■□□ 2.14
PHF1-208ENST00000486845 KAT6BQ8WYB5 2073 aa28.39■■■□□ 2.13
PHF1-208ENST00000486845 FAM208AQ9UK61 1670 aaKnown RBP28.38■■■□□ 2.13
PHF1-208ENST00000486845 IP6K1Q92551 441 aa28.36■■■□□ 2.13
PHF1-208ENST00000486845 TONSLQ96HA7 1378 aa28.35■■■□□ 2.13
PHF1-208ENST00000486845 ARXQ96QS3 562 aa28.34■■■□□ 2.13
PHF1-208ENST00000486845 ZNF827Q17R98 1081 aa28.33■■■□□ 2.13
PHF1-208ENST00000486845 LRRC4BQ9NT99 713 aa28.32■■■□□ 2.12
PHF1-208ENST00000486845 MAP3K5Q99683 1374 aa28.32■■■□□ 2.12
PHF1-208ENST00000486845 SLC27A3Q5K4L6 730 aa28.31■■■□□ 2.12
PHF1-208ENST00000486845 DDX54Q8TDD1 881 aaKnown RBP28.31■■■□□ 2.12
PHF1-208ENST00000486845 LTV1Q96GA3 475 aaPredicted RBP28.31■■■□□ 2.12
PHF1-208ENST00000486845 COG3Q96JB2 828 aa28.29■■■□□ 2.12
PHF1-208ENST00000486845 QSER1Q2KHR3 1735 aa28.29■■■□□ 2.12
PHF1-208ENST00000486845 ZNF784Q8NCA9 323 aaPredicted RBP28.28■■■□□ 2.12
PHF1-208ENST00000486845 CHD4Q14839 1912 aa28.28■■■□□ 2.12
PHF1-208ENST00000486845 AKT1S1Q96B36 256 aa28.27■■■□□ 2.12
PHF1-208ENST00000486845 MAP3K19Q56UN5 1328 aa28.26■■■□□ 2.11
PHF1-208ENST00000486845 SLC16A10Q8TF71 515 aa28.26■■■□□ 2.11
PHF1-208ENST00000486845 SLC24A1O60721 1099 aa28.25■■■□□ 2.11
PHF1-208ENST00000486845 TESK2Q96S53 571 aa28.25■■■□□ 2.11
PHF1-208ENST00000486845 ANKRD36BQ8N2N9 1353 aa28.24■■■□□ 2.11
PHF1-208ENST00000486845 HOXC9P31274 260 aa28.24■■■□□ 2.11
PHF1-208ENST00000486845 AMPHP49418 695 aa28.24■■■□□ 2.11
PHF1-208ENST00000486845 DOT1LQ8TEK3 1739 aa28.23■■■□□ 2.11
PHF1-208ENST00000486845 SYTL4Q96C24 671 aaPredicted RBP28.23■■■□□ 2.11
PHF1-208ENST00000486845 ST20-MTHFSA0A0A6YYL1 179 aa28.22■■■□□ 2.11
PHF1-208ENST00000486845 UTRNP46939 3433 aa28.22■■■□□ 2.11
PHF1-208ENST00000486845 POLD1P28340 1107 aa28.21■■■□□ 2.11
PHF1-208ENST00000486845 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
PHF1-208ENST00000486845 RTL1A6NKG5 1358 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms