RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
LMBR1-218ENST00000486837 ESPNB1AK53 854 aa9.35□□□□□ -0.91
LMBR1-218ENST00000486837 PPP1R15AO75807 674 aaPredicted RBP9.35□□□□□ -0.91
LMBR1-218ENST00000486837 HOMEZQ8IX15 550 aa9.35□□□□□ -0.91
LMBR1-218ENST00000486837 CHIC2Q9UKJ5 165 aa9.35□□□□□ -0.91
LMBR1-218ENST00000486837 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
LMBR1-218ENST00000486837 PIK3CDO00329 1044 aa9.34□□□□□ -0.91
LMBR1-218ENST00000486837 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
LMBR1-218ENST00000486837 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
LMBR1-218ENST00000486837 SKIP12755 728 aa9.34□□□□□ -0.91
LMBR1-218ENST00000486837 MAP7D1Q3KQU3 841 aa9.34□□□□□ -0.91
LMBR1-218ENST00000486837 ZNF697Q5TEC3 545 aa9.34□□□□□ -0.91
LMBR1-218ENST00000486837 CDK15Q96Q40 435 aa9.34□□□□□ -0.91
LMBR1-218ENST00000486837 PRKD2Q9BZL6 878 aa9.34□□□□□ -0.91
LMBR1-218ENST00000486837 SIAH2O43255 324 aa9.33□□□□□ -0.92
LMBR1-218ENST00000486837 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
LMBR1-218ENST00000486837 VASH1Q7L8A9 365 aaPredicted RBP9.33□□□□□ -0.92
LMBR1-218ENST00000486837 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
LMBR1-218ENST00000486837 PBXIP1Q96AQ6 731 aa9.33□□□□□ -0.92
LMBR1-218ENST00000486837 KCTD15Q96SI1 283 aaPredicted RBP9.33□□□□□ -0.92
LMBR1-218ENST00000486837 PLPP7Q8NBV4 271 aa9.32□□□□□ -0.92
LMBR1-218ENST00000486837 USP17L5A8MUK1 530 aa9.31□□□□□ -0.92
LMBR1-218ENST00000486837 RFX1P22670 979 aa9.31□□□□□ -0.92
LMBR1-218ENST00000486837 MRGPRX2Q96LB1 330 aa9.31□□□□□ -0.92
LMBR1-218ENST00000486837 USP17L3A6NCW0 530 aa9.3□□□□□ -0.92
LMBR1-218ENST00000486837 USP17L4A6NCW7 530 aa9.3□□□□□ -0.92
LMBR1-218ENST00000486837 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
LMBR1-218ENST00000486837 TRAF7Q6Q0C0 670 aa9.3□□□□□ -0.92
LMBR1-218ENST00000486837 USP17L2Q6R6M4 530 aa9.3□□□□□ -0.92
LMBR1-218ENST00000486837 USP17L1Q7RTZ2 530 aa9.3□□□□□ -0.92
LMBR1-218ENST00000486837 RGS20O76081 388 aa9.29□□□□□ -0.92
LMBR1-218ENST00000486837 ARID5BQ14865 1188 aa9.29□□□□□ -0.92
LMBR1-218ENST00000486837 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
LMBR1-218ENST00000486837 CCDC85AQ96PX6 553 aaPredicted RBP9.29□□□□□ -0.92
LMBR1-218ENST00000486837 DOLKQ9UPQ8 538 aa9.29□□□□□ -0.92
LMBR1-218ENST00000486837 TLL2Q9Y6L7 1015 aa9.29□□□□□ -0.92
LMBR1-218ENST00000486837 ADH1CP00326 375 aa9.28□□□□□ -0.92
LMBR1-218ENST00000486837 EML3Q32P44 896 aa9.28□□□□□ -0.92
LMBR1-218ENST00000486837 INTS6LQ5JSJ4 861 aaKnown RBP9.28□□□□□ -0.92
LMBR1-218ENST00000486837 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
LMBR1-218ENST00000486837 PKD2L1Q9P0L9 805 aa9.28□□□□□ -0.92
LMBR1-218ENST00000486837 ACIN1Q9UKV3 1341 aaKnown RBP9.28□□□□□ -0.92
LMBR1-218ENST00000486837 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.27□□□□□ -0.93
LMBR1-218ENST00000486837 GRM5P41594 1212 aa9.27□□□□□ -0.93
LMBR1-218ENST00000486837 DHX9Q08211 1270 aaKnown RBP9.27□□□□□ -0.93
LMBR1-218ENST00000486837 NR5A1Q13285 461 aa9.27□□□□□ -0.93
LMBR1-218ENST00000486837 NCOA4Q13772 614 aa9.27□□□□□ -0.93
LMBR1-218ENST00000486837 KANK4Q5T7N3 995 aaPredicted RBP9.27□□□□□ -0.93
LMBR1-218ENST00000486837 FSHRP23945 695 aa9.26□□□□□ -0.93
LMBR1-218ENST00000486837 SIRT1Q96EB6 747 aa9.26□□□□□ -0.93
LMBR1-218ENST00000486837 PCDHB11Q9Y5F2 797 aa9.26□□□□□ -0.93
LMBR1-218ENST00000486837 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
LMBR1-218ENST00000486837 GDF9O60383 454 aa9.25□□□□□ -0.93
LMBR1-218ENST00000486837 FOXC1Q12948 553 aa9.25□□□□□ -0.93
LMBR1-218ENST00000486837 TSGA10IPQ3SY00 556 aa9.25□□□□□ -0.93
LMBR1-218ENST00000486837 DEPDC4Q8N2C3 294 aa9.25□□□□□ -0.93
LMBR1-218ENST00000486837 SNIP1Q8TAD8 396 aaKnown RBP9.25□□□□□ -0.93
LMBR1-218ENST00000486837 MKRN1Q9UHC7 482 aaKnown RBP9.25□□□□□ -0.93
LMBR1-218ENST00000486837 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
LMBR1-218ENST00000486837 ATG7O95352 703 aa9.24□□□□□ -0.93
LMBR1-218ENST00000486837 USP4Q13107 963 aa9.24□□□□□ -0.93
LMBR1-218ENST00000486837 CCDC116Q8IYX3 515 aa9.24□□□□□ -0.93
LMBR1-218ENST00000486837 NOD1Q9Y239 953 aa9.24□□□□□ -0.93
LMBR1-218ENST00000486837 RAB15P59190 212 aa9.23□□□□□ -0.93
LMBR1-218ENST00000486837 PRR20EP86478 221 aa9.23□□□□□ -0.93
LMBR1-218ENST00000486837 PRR20CP86479 221 aa9.23□□□□□ -0.93
LMBR1-218ENST00000486837 PRR20DP86480 221 aa9.23□□□□□ -0.93
LMBR1-218ENST00000486837 PRR20BP86481 221 aa9.23□□□□□ -0.93
LMBR1-218ENST00000486837 PRR20AP86496 221 aa9.23□□□□□ -0.93
LMBR1-218ENST00000486837 OXLD1Q5BKU9 147 aa9.23□□□□□ -0.93
LMBR1-218ENST00000486837 TRIM50Q86XT4 487 aa9.23□□□□□ -0.93
LMBR1-218ENST00000486837 FAM196BA6NMK8 535 aa9.22□□□□□ -0.93
LMBR1-218ENST00000486837 ALDH1A1P00352 501 aa9.22□□□□□ -0.93
LMBR1-218ENST00000486837 CDCA7Q9BWT1 371 aaPredicted RBP9.22□□□□□ -0.93
LMBR1-218ENST00000486837 WASF2Q9Y6W5 498 aa9.22□□□□□ -0.93
LMBR1-218ENST00000486837 ATP1A2P50993 1020 aa9.21□□□□□ -0.94
LMBR1-218ENST00000486837 PDE4CQ08493 712 aa9.21□□□□□ -0.94
LMBR1-218ENST00000486837 ELOAQ14241 798 aaKnown RBP9.21□□□□□ -0.94
LMBR1-218ENST00000486837 CYP4X1Q8N118 509 aa9.21□□□□□ -0.94
LMBR1-218ENST00000486837 TOR4AQ9NXH8 423 aa9.21□□□□□ -0.94
LMBR1-218ENST00000486837 TTC24A2A3L6 582 aaPredicted RBP9.2□□□□□ -0.94
LMBR1-218ENST00000486837 MYCP01106 439 aaPredicted RBP9.2□□□□□ -0.94
LMBR1-218ENST00000486837 ERVK-9P63128 1117 aa9.2□□□□□ -0.94
LMBR1-218ENST00000486837 CDCA8Q53HL2 280 aa9.2□□□□□ -0.94
LMBR1-218ENST00000486837 PPP1R26Q5T8A7 1209 aaPredicted RBP9.2□□□□□ -0.94
LMBR1-218ENST00000486837 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
LMBR1-218ENST00000486837 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
LMBR1-218ENST00000486837 EMILIN1Q9Y6C2 1016 aa9.2□□□□□ -0.94
LMBR1-218ENST00000486837 NR3C2P08235 984 aa9.19□□□□□ -0.94
LMBR1-218ENST00000486837 RASA1P20936 1047 aa9.19□□□□□ -0.94
LMBR1-218ENST00000486837 NNTQ13423 1086 aa9.19□□□□□ -0.94
LMBR1-218ENST00000486837 TRIM67Q6ZTA4 783 aa9.19□□□□□ -0.94
LMBR1-218ENST00000486837 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L10C9JJH3 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L12C9JPN9 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L21D6R901 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms