RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 SAFB2Q14151 953 aaKnown RBP eCLIP12.65□□□□□ -0.38
APTX-228ENST00000486724 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
APTX-228ENST00000486724 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
APTX-228ENST00000486724 CPDO75976 1380 aa12.65□□□□□ -0.38
APTX-228ENST00000486724 ANKRD30BQ9BXX2 1392 aa12.65□□□□□ -0.38
APTX-228ENST00000486724 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
APTX-228ENST00000486724 WDR90Q96KV7 1748 aa12.63□□□□□ -0.39
APTX-228ENST00000486724 WNK3Q9BYP7 1800 aa12.63□□□□□ -0.39
APTX-228ENST00000486724 SLC16A10Q8TF71 515 aa12.63□□□□□ -0.39
APTX-228ENST00000486724 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
APTX-228ENST00000486724 KIF3CO14782 793 aa12.62□□□□□ -0.39
APTX-228ENST00000486724 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
APTX-228ENST00000486724 JMYQ8N9B5 988 aa12.61□□□□□ -0.39
APTX-228ENST00000486724 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
APTX-228ENST00000486724 ITSN1Q15811 1721 aa12.6□□□□□ -0.39
APTX-228ENST00000486724 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
APTX-228ENST00000486724 NHSQ6T4R5 1651 aa12.6□□□□□ -0.39
APTX-228ENST00000486724 ZNF827Q17R98 1081 aa12.59□□□□□ -0.39
APTX-228ENST00000486724 KLRG1Q96E93 195 aa12.59□□□□□ -0.39
APTX-228ENST00000486724 POGKQ9P215 609 aa12.59□□□□□ -0.39
APTX-228ENST00000486724 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
APTX-228ENST00000486724 ARHGEF28Q8N1W1 1705 aaKnown RBP12.57□□□□□ -0.4
APTX-228ENST00000486724 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
APTX-228ENST00000486724 TOMM70O94826 608 aa12.57□□□□□ -0.4
APTX-228ENST00000486724 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
APTX-228ENST00000486724 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
APTX-228ENST00000486724 ITGAEP38570 1179 aa12.56□□□□□ -0.4
APTX-228ENST00000486724 RGL3Q3MIN7 710 aa12.56□□□□□ -0.4
APTX-228ENST00000486724 USP19O94966 1318 aa12.56□□□□□ -0.4
APTX-228ENST00000486724 C14orf93Q9H972 538 aaKnown RBP12.55□□□□□ -0.4
APTX-228ENST00000486724 BRD4O60885 1362 aaPredicted RBP12.55□□□□□ -0.4
APTX-228ENST00000486724 TOM1L2Q6ZVM7 507 aa12.54□□□□□ -0.4
APTX-228ENST00000486724 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
APTX-228ENST00000486724 WASLO00401 505 aaPredicted RBP12.53□□□□□ -0.4
APTX-228ENST00000486724 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
APTX-228ENST00000486724 MINK1Q8N4C8 1332 aaPredicted RBP12.53□□□□□ -0.4
APTX-228ENST00000486724 BTAF1O14981 1849 aa12.53□□□□□ -0.4
APTX-228ENST00000486724 TUBGCP6Q96RT7 1819 aa12.53□□□□□ -0.4
APTX-228ENST00000486724 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
APTX-228ENST00000486724 GCP02774 474 aa12.51□□□□□ -0.41
APTX-228ENST00000486724 CFAP70Q5T0N1 1121 aa12.51□□□□□ -0.41
APTX-228ENST00000486724 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
APTX-228ENST00000486724 TNS2Q63HR2 1409 aa12.51□□□□□ -0.41
APTX-228ENST00000486724 HTRA3P83110 453 aa12.5□□□□□ -0.41
APTX-228ENST00000486724 SLC4A1APQ9BWU0 796 aaKnown RBP12.5□□□□□ -0.41
APTX-228ENST00000486724 WDR17Q8IZU2 1322 aa12.5□□□□□ -0.41
APTX-228ENST00000486724 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
APTX-228ENST00000486724 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
APTX-228ENST00000486724 USP6P35125 1406 aa12.49□□□□□ -0.41
APTX-228ENST00000486724 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
APTX-228ENST00000486724 EXOC5O00471 708 aa12.49□□□□□ -0.41
APTX-228ENST00000486724 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
APTX-228ENST00000486724 CD2APQ9Y5K6 639 aa12.49□□□□□ -0.41
APTX-228ENST00000486724 ABCC6O95255 1503 aa12.48□□□□□ -0.41
APTX-228ENST00000486724 SLC27A3Q5K4L6 730 aa12.48□□□□□ -0.41
APTX-228ENST00000486724 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
APTX-228ENST00000486724 NUDT16Q96DE0 195 aaKnown RBP12.48□□□□□ -0.41
APTX-228ENST00000486724 ACSBG1Q96GR2 724 aa12.48□□□□□ -0.41
APTX-228ENST00000486724 HSPA1AP0DMV8 641 aaKnown RBP12.47□□□□□ -0.41
APTX-228ENST00000486724 HSPA1BP0DMV9 641 aaKnown RBP12.47□□□□□ -0.41
APTX-228ENST00000486724 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
APTX-228ENST00000486724 CICQ96RK0 1608 aaPredicted RBP12.47□□□□□ -0.41
APTX-228ENST00000486724 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
APTX-228ENST00000486724 ACEP12821 1306 aa12.46□□□□□ -0.41
APTX-228ENST00000486724 COL18A1P39060 1754 aa12.46□□□□□ -0.42
APTX-228ENST00000486724 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
APTX-228ENST00000486724 FSTL1Q12841 308 aa12.45□□□□□ -0.42
APTX-228ENST00000486724 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
APTX-228ENST00000486724 TRAK1Q9UPV9 953 aa12.45□□□□□ -0.42
APTX-228ENST00000486724 SLIT3O75094 1523 aa12.44□□□□□ -0.42
APTX-228ENST00000486724 C16orf71Q8IYS4 520 aaPredicted RBP12.44□□□□□ -0.42
APTX-228ENST00000486724 MSH5O43196 834 aa12.43□□□□□ -0.42
APTX-228ENST00000486724 NMRK2Q9NPI5 230 aa12.43□□□□□ -0.42
APTX-228ENST00000486724 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
APTX-228ENST00000486724 IGSF1Q8N6C5 1336 aa12.42□□□□□ -0.42
APTX-228ENST00000486724 MSL1Q68DK7 614 aa12.42□□□□□ -0.42
APTX-228ENST00000486724 CPSF1Q10570 1443 aaKnown RBP12.42□□□□□ -0.42
APTX-228ENST00000486724 PPIP5K1Q6PFW1 1433 aa12.42□□□□□ -0.42
APTX-228ENST00000486724 CSB-PGBD3P0DP91 1061 aa12.41□□□□□ -0.42
APTX-228ENST00000486724 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
APTX-228ENST00000486724 AXIN2Q9Y2T1 843 aa12.41□□□□□ -0.42
APTX-228ENST00000486724 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
APTX-228ENST00000486724 CCDC61Q9Y6R9 512 aa12.4□□□□□ -0.42
APTX-228ENST00000486724 RGPD5Q99666 1765 aa12.39□□□□□ -0.43
APTX-228ENST00000486724 FAM161AQ3B820 660 aa12.39□□□□□ -0.43
APTX-228ENST00000486724 LY75O60449 1722 aa12.39□□□□□ -0.43
APTX-228ENST00000486724 COL23A1Q86Y22 540 aaPredicted RBP12.38□□□□□ -0.43
APTX-228ENST00000486724 KCNQ4P56696 695 aa12.37□□□□□ -0.43
APTX-228ENST00000486724 NLRP6P59044 892 aa12.37□□□□□ -0.43
APTX-228ENST00000486724 KAT6BQ8WYB5 2073 aa12.37□□□□□ -0.43
APTX-228ENST00000486724 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
APTX-228ENST00000486724 C10orf71Q711Q0 1435 aa12.36□□□□□ -0.43
APTX-228ENST00000486724 PLEKHG2Q9H7P9 1386 aa12.35□□□□□ -0.43
APTX-228ENST00000486724 TRIM26Q12899 539 aaPredicted RBP12.35□□□□□ -0.43
APTX-228ENST00000486724 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
APTX-228ENST00000486724 TNRC6CQ9HCJ0 1690 aaKnown RBP12.33□□□□□ -0.44
APTX-228ENST00000486724 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
APTX-228ENST00000486724 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
APTX-228ENST00000486724 KIAA1210Q9ULL0 1709 aa12.32□□□□□ -0.44
APTX-228ENST00000486724 IL2RBP14784 551 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms