RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-208	ENST00000486585	NINL	Q9Y2I6	1382 aa		14.15	□□□□□ -0.14
PCMT1-208	ENST00000486585	YY1	P25490	414 aa		14.15	□□□□□ -0.14
PCMT1-208	ENST00000486585	BCL11B	Q9C0K0	894 aa	Predicted RBP	14.15	□□□□□ -0.14
PCMT1-208	ENST00000486585	LRRC37A3	O60309	1634 aa		14.14	□□□□□ -0.15
PCMT1-208	ENST00000486585	WDR17	Q8IZU2	1322 aa		14.14	□□□□□ -0.15
PCMT1-208	ENST00000486585	WNK3	Q9BYP7	1800 aa		14.13	□□□□□ -0.15
PCMT1-208	ENST00000486585	COL18A1	P39060	1754 aa		14.13	□□□□□ -0.15
PCMT1-208	ENST00000486585	TRPM1	Q7Z4N2	1603 aa		14.12	□□□□□ -0.15
PCMT1-208	ENST00000486585	PIK3C2A	O00443	1686 aa		14.12	□□□□□ -0.15
PCMT1-208	ENST00000486585	BCL9	O00512	1426 aa		14.12	□□□□□ -0.15
PCMT1-208	ENST00000486585	TTC21A	Q8NDW8	1320 aa		14.12	□□□□□ -0.15
PCMT1-208	ENST00000486585	CSB-PGBD3	P0DP91	1061 aa		14.11	□□□□□ -0.15
PCMT1-208	ENST00000486585	CPSF1	Q10570	1443 aa	Known RBP	14.11	□□□□□ -0.15
PCMT1-208	ENST00000486585	CARD10	Q9BWT7	1032 aa		14.11	□□□□□ -0.15
PCMT1-208	ENST00000486585	RGPD5	Q99666	1765 aa		14.11	□□□□□ -0.15
PCMT1-208	ENST00000486585	EXOC5	O00471	708 aa		14.1	□□□□□ -0.15
PCMT1-208	ENST00000486585	ARHGEF25	Q86VW2	580 aa		14.1	□□□□□ -0.15
PCMT1-208	ENST00000486585	KAT6B	Q8WYB5	2073 aa		14.1	□□□□□ -0.15
PCMT1-208	ENST00000486585	AXIN2	Q9Y2T1	843 aa		14.09	□□□□□ -0.15
PCMT1-208	ENST00000486585	TTC21B	Q7Z4L5	1316 aa		14.09	□□□□□ -0.15
PCMT1-208	ENST00000486585	MARCH10	Q8NA82	808 aa	Predicted RBP	14.08	□□□□□ -0.16
PCMT1-208	ENST00000486585	L3MBTL2	Q969R5	705 aa		14.08	□□□□□ -0.16
PCMT1-208	ENST00000486585	ABCC6	O95255	1503 aa		14.08	□□□□□ -0.16
PCMT1-208	ENST00000486585	CCDC7	Q96M83	1385 aa		14.08	□□□□□ -0.16
PCMT1-208	ENST00000486585	CASZ1	Q86V15	1759 aa		14.07	□□□□□ -0.16
PCMT1-208	ENST00000486585	STK32B	Q9NY57	414 aa		14.07	□□□□□ -0.16
PCMT1-208	ENST00000486585	ROCK2	O75116	1388 aa	Known RBP	14.06	□□□□□ -0.16
PCMT1-208	ENST00000486585	KTN1	Q86UP2	1357 aa	Known RBP	14.06	□□□□□ -0.16
PCMT1-208	ENST00000486585	TXNRD1	Q16881	649 aa		14.05	□□□□□ -0.16
PCMT1-208	ENST00000486585	ANO8	Q9HCE9	1232 aa	Predicted RBP	14.05	□□□□□ -0.16
PCMT1-208	ENST00000486585	SOX12	O15370	315 aa		14.04	□□□□□ -0.16
PCMT1-208	ENST00000486585	PROM2	Q8N271	834 aa		14.04	□□□□□ -0.16
PCMT1-208	ENST00000486585	NFAT5	O94916	1531 aa		14.03	□□□□□ -0.16
PCMT1-208	ENST00000486585	MON2	Q7Z3U7	1717 aa		14.03	□□□□□ -0.16
PCMT1-208	ENST00000486585	CHD4	Q14839	1912 aa		14.02	□□□□□ -0.16
PCMT1-208	ENST00000486585	TNS2	Q63HR2	1409 aa		14.02	□□□□□ -0.16
PCMT1-208	ENST00000486585	ZBTB7A	O95365	584 aa		14.02	□□□□□ -0.17
PCMT1-208	ENST00000486585	SLC15A2	Q16348	729 aa		14.02	□□□□□ -0.17
PCMT1-208	ENST00000486585	PTF1A	Q7RTS3	328 aa		14.02	□□□□□ -0.17
PCMT1-208	ENST00000486585	MTFR1L	Q9H019	292 aa		14.02	□□□□□ -0.17
PCMT1-208	ENST00000486585	NHS	Q6T4R5	1651 aa		14.01	□□□□□ -0.17
PCMT1-208	ENST00000486585	NLRP2	Q9NX02	1062 aa		14.01	□□□□□ -0.17
PCMT1-208	ENST00000486585	USP31	Q70CQ4	1352 aa		14	□□□□□ -0.17
PCMT1-208	ENST00000486585	SBNO2	Q9Y2G9	1366 aa		14	□□□□□ -0.17
PCMT1-208	ENST00000486585	PTGER2	P43116	358 aa		14	□□□□□ -0.17
PCMT1-208	ENST00000486585	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	14	□□□□□ -0.17
PCMT1-208	ENST00000486585	ATF5	Q9Y2D1	282 aa	Predicted RBP	14	□□□□□ -0.17
PCMT1-208	ENST00000486585	LTN1	O94822	1766 aa		14	□□□□□ -0.17
PCMT1-208	ENST00000486585	USP54	Q70EL1	1684 aa		14	□□□□□ -0.17
PCMT1-208	ENST00000486585	ERBB3	P21860	1342 aa		13.99	□□□□□ -0.17
PCMT1-208	ENST00000486585	MYOM1	P52179	1685 aa		13.99	□□□□□ -0.17
PCMT1-208	ENST00000486585	IL2RB	P14784	551 aa		13.99	□□□□□ -0.17
PCMT1-208	ENST00000486585	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
PCMT1-208	ENST00000486585	NEUROD1	Q13562	356 aa		13.98	□□□□□ -0.17
PCMT1-208	ENST00000486585	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.98	□□□□□ -0.17
PCMT1-208	ENST00000486585	TERF2IP	Q9NYB0	399 aa		13.98	□□□□□ -0.17
PCMT1-208	ENST00000486585	BTAF1	O14981	1849 aa		13.97	□□□□□ -0.17
PCMT1-208	ENST00000486585	SYT17	Q9BSW7	474 aa		13.97	□□□□□ -0.17
PCMT1-208	ENST00000486585	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.97	□□□□□ -0.17
PCMT1-208	ENST00000486585	TMC1	Q8TDI8	760 aa		13.96	□□□□□ -0.17
PCMT1-208	ENST00000486585	SIN3A	Q96ST3	1273 aa		13.96	□□□□□ -0.17
PCMT1-208	ENST00000486585	ANKRD24	Q8TF21	1146 aa		13.95	□□□□□ -0.18
PCMT1-208	ENST00000486585	ACSBG1	Q96GR2	724 aa		13.95	□□□□□ -0.18
PCMT1-208	ENST00000486585	PUS7	Q96PZ0	661 aa	Known RBP	13.95	□□□□□ -0.18
PCMT1-208	ENST00000486585	ARX	Q96QS3	562 aa		13.95	□□□□□ -0.18
PCMT1-208	ENST00000486585	CARD11	Q9BXL7	1154 aa		13.95	□□□□□ -0.18
PCMT1-208	ENST00000486585	EDC4	Q6P2E9	1401 aa	Known RBP	13.95	□□□□□ -0.18
PCMT1-208	ENST00000486585	FAM208A	Q9UK61	1670 aa	Known RBP	13.95	□□□□□ -0.18
PCMT1-208	ENST00000486585	SLC24A1	O60721	1099 aa		13.94	□□□□□ -0.18
PCMT1-208	ENST00000486585	SLC27A3	Q5K4L6	730 aa		13.94	□□□□□ -0.18
PCMT1-208	ENST00000486585	NME9	Q86XW9	330 aa		13.94	□□□□□ -0.18
PCMT1-208	ENST00000486585	SLC16A10	Q8TF71	515 aa		13.94	□□□□□ -0.18
PCMT1-208	ENST00000486585	MAP3K5	Q99683	1374 aa		13.94	□□□□□ -0.18
PCMT1-208	ENST00000486585	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.93	□□□□□ -0.18
PCMT1-208	ENST00000486585	SGIP1	Q9BQI5	828 aa		13.93	□□□□□ -0.18
PCMT1-208	ENST00000486585	PAPPA	Q13219	1627 aa		13.92	□□□□□ -0.18
PCMT1-208	ENST00000486585	QSER1	Q2KHR3	1735 aa		13.92	□□□□□ -0.18
PCMT1-208	ENST00000486585	CD163L1	Q9NR16	1453 aa		13.92	□□□□□ -0.18
PCMT1-208	ENST00000486585	HMGB2	P26583	209 aa	Known RBP	13.91	□□□□□ -0.18
PCMT1-208	ENST00000486585	POLD1	P28340	1107 aa		13.91	□□□□□ -0.18
PCMT1-208	ENST00000486585	IP6K1	Q92551	441 aa		13.91	□□□□□ -0.18
PCMT1-208	ENST00000486585	SLC12A5	Q9H2X9	1139 aa		13.91	□□□□□ -0.18
PCMT1-208	ENST00000486585	DDX54	Q8TDD1	881 aa	Known RBP	13.9	□□□□□ -0.18
PCMT1-208	ENST00000486585	GPR162	Q16538	588 aa		13.89	□□□□□ -0.19
PCMT1-208	ENST00000486585		A0A1W2PP64	1363 aa		13.88	□□□□□ -0.19
PCMT1-208	ENST00000486585	AKT1S1	Q96B36	256 aa		13.88	□□□□□ -0.19
PCMT1-208	ENST00000486585	COG3	Q96JB2	828 aa		13.88	□□□□□ -0.19
PCMT1-208	ENST00000486585	LRRC4B	Q9NT99	713 aa		13.88	□□□□□ -0.19
PCMT1-208	ENST00000486585	AMPH	P49418	695 aa		13.87	□□□□□ -0.19
PCMT1-208	ENST00000486585	ZNF827	Q17R98	1081 aa		13.87	□□□□□ -0.19
PCMT1-208	ENST00000486585	TFCP2L1	Q9NZI6	479 aa		13.87	□□□□□ -0.19
PCMT1-208	ENST00000486585	TONSL	Q96HA7	1378 aa		13.86	□□□□□ -0.19
PCMT1-208	ENST00000486585	SYTL4	Q96C24	671 aa	Predicted RBP	13.86	□□□□□ -0.19
PCMT1-208	ENST00000486585	LTV1	Q96GA3	475 aa	Predicted RBP	13.86	□□□□□ -0.19
PCMT1-208	ENST00000486585	COL24A1	Q17RW2	1714 aa		13.86	□□□□□ -0.19
PCMT1-208	ENST00000486585	ANKRD36B	Q8N2N9	1353 aa		13.85	□□□□□ -0.19
PCMT1-208	ENST00000486585	ZCRB1	Q8TBF4	217 aa	Known RBP	13.85	□□□□□ -0.19
PCMT1-208	ENST00000486585	CGNL1	Q0VF96	1302 aa		13.85	□□□□□ -0.19
PCMT1-208	ENST00000486585	LY75	O60449	1722 aa		13.84	□□□□□ -0.19
PCMT1-208	ENST00000486585	PRIM1	P49642	420 aa	Known RBP	13.84	□□□□□ -0.19

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