RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
SDCCAG3-211ENST00000486441 LRRC37A3O60309 1634 aa20.67■□□□□ 0.9
SDCCAG3-211ENST00000486441 TOM1L2Q6ZVM7 507 aa20.66■□□□□ 0.9
SDCCAG3-211ENST00000486441 BCL9O00512 1426 aa20.66■□□□□ 0.9
SDCCAG3-211ENST00000486441 PIK3C2AO00443 1686 aa20.66■□□□□ 0.9
SDCCAG3-211ENST00000486441 TTC21BQ7Z4L5 1316 aa20.65■□□□□ 0.9
SDCCAG3-211ENST00000486441 QRICH2Q9H0J4 1663 aa20.64■□□□□ 0.9
SDCCAG3-211ENST00000486441 YY1P25490 414 aa20.64■□□□□ 0.89
SDCCAG3-211ENST00000486441 CPSF1Q10570 1443 aaKnown RBP20.62■□□□□ 0.89
SDCCAG3-211ENST00000486441 RGPD3A6NKT7 1758 aaPredicted RBP20.62■□□□□ 0.89
SDCCAG3-211ENST00000486441 RGPD4Q7Z3J3 1758 aa20.62■□□□□ 0.89
SDCCAG3-211ENST00000486441 CARD10Q9BWT7 1032 aa20.62■□□□□ 0.89
SDCCAG3-211ENST00000486441 NINLQ9Y2I6 1382 aa20.61■□□□□ 0.89
SDCCAG3-211ENST00000486441 PTGER2P43116 358 aa20.61■□□□□ 0.89
SDCCAG3-211ENST00000486441 CASZ1Q86V15 1759 aa20.61■□□□□ 0.89
SDCCAG3-211ENST00000486441 EVC2Q86UK5 1308 aa20.6■□□□□ 0.89
SDCCAG3-211ENST00000486441 ZNF692Q9BU19 519 aaPredicted RBP20.6■□□□□ 0.89
SDCCAG3-211ENST00000486441 CDCA7Q9BWT1 371 aaPredicted RBP20.6■□□□□ 0.89
SDCCAG3-211ENST00000486441 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
SDCCAG3-211ENST00000486441 PPP1R1BQ9UD71 204 aaPredicted RBP20.59■□□□□ 0.89
SDCCAG3-211ENST00000486441 TXNRD1Q16881 649 aa20.58■□□□□ 0.89
SDCCAG3-211ENST00000486441 RGPD5Q99666 1765 aa20.58■□□□□ 0.89
SDCCAG3-211ENST00000486441 NFAT5O94916 1531 aa20.58■□□□□ 0.88
SDCCAG3-211ENST00000486441 KCNH5Q8NCM2 988 aa20.57■□□□□ 0.88
SDCCAG3-211ENST00000486441 WNK3Q9BYP7 1800 aa20.57■□□□□ 0.88
SDCCAG3-211ENST00000486441 SOX12O15370 315 aa20.56■□□□□ 0.88
SDCCAG3-211ENST00000486441 ZBTB7AO95365 584 aa20.56■□□□□ 0.88
SDCCAG3-211ENST00000486441 TTC21AQ8NDW8 1320 aa20.55■□□□□ 0.88
SDCCAG3-211ENST00000486441 SGIP1Q9BQI5 828 aa20.55■□□□□ 0.88
SDCCAG3-211ENST00000486441 EXOC5O00471 708 aa20.54■□□□□ 0.88
SDCCAG3-211ENST00000486441 AKAP12Q02952 1782 aa20.54■□□□□ 0.88
SDCCAG3-211ENST00000486441 TRPM1Q7Z4N2 1603 aa20.53■□□□□ 0.88
SDCCAG3-211ENST00000486441 SLC15A2Q16348 729 aa20.53■□□□□ 0.88
SDCCAG3-211ENST00000486441 ATF5Q9Y2D1 282 aaPredicted RBP20.53■□□□□ 0.88
SDCCAG3-211ENST00000486441 USP31Q70CQ4 1352 aa20.52■□□□□ 0.88
SDCCAG3-211ENST00000486441 CSB-PGBD3P0DP91 1061 aa20.51■□□□□ 0.87
SDCCAG3-211ENST00000486441 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
SDCCAG3-211ENST00000486441 CCDC7Q96M83 1385 aa20.5■□□□□ 0.87
SDCCAG3-211ENST00000486441 CD163L1Q9NR16 1453 aa20.5■□□□□ 0.87
SDCCAG3-211ENST00000486441 SYT17Q9BSW7 474 aa20.49■□□□□ 0.87
SDCCAG3-211ENST00000486441 MYOM1P52179 1685 aa20.48■□□□□ 0.87
SDCCAG3-211ENST00000486441 ROCK2O75116 1388 aaKnown RBP20.48■□□□□ 0.87
SDCCAG3-211ENST00000486441 TNS2Q63HR2 1409 aa20.48■□□□□ 0.87
SDCCAG3-211ENST00000486441 STK32BQ9NY57 414 aa20.48■□□□□ 0.87
SDCCAG3-211ENST00000486441 ERBB3P21860 1342 aa20.48■□□□□ 0.87
SDCCAG3-211ENST00000486441 SBNO2Q9Y2G9 1366 aa20.47■□□□□ 0.87
SDCCAG3-211ENST00000486441 NME9Q86XW9 330 aa20.47■□□□□ 0.87
SDCCAG3-211ENST00000486441 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
SDCCAG3-211ENST00000486441 FHDC1Q9C0D6 1143 aaPredicted RBP20.47■□□□□ 0.87
SDCCAG3-211ENST00000486441 ABCC6O95255 1503 aa20.47■□□□□ 0.87
SDCCAG3-211ENST00000486441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.46■□□□□ 0.87
SDCCAG3-211ENST00000486441 GOLGB1Q14789 3259 aaKnown RBP20.45■□□□□ 0.86
SDCCAG3-211ENST00000486441 MTFR1LQ9H019 292 aa20.45■□□□□ 0.86
SDCCAG3-211ENST00000486441 LRRC4BQ9NT99 713 aa20.45■□□□□ 0.86
SDCCAG3-211ENST00000486441 DCAF8L1A6NGE4 600 aa20.44■□□□□ 0.86
SDCCAG3-211ENST00000486441 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
SDCCAG3-211ENST00000486441 MON2Q7Z3U7 1717 aa20.44■□□□□ 0.86
SDCCAG3-211ENST00000486441 ZNF784Q8NCA9 323 aaPredicted RBP20.43■□□□□ 0.86
SDCCAG3-211ENST00000486441 SLC12A5Q9H2X9 1139 aa20.43■□□□□ 0.86
SDCCAG3-211ENST00000486441 NLRP2Q9NX02 1062 aa20.43■□□□□ 0.86
SDCCAG3-211ENST00000486441 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
SDCCAG3-211ENST00000486441 NHSQ6T4R5 1651 aa20.42■□□□□ 0.86
SDCCAG3-211ENST00000486441 USP54Q70EL1 1684 aa20.42■□□□□ 0.86
SDCCAG3-211ENST00000486441 ZNF827Q17R98 1081 aa20.42■□□□□ 0.86
SDCCAG3-211ENST00000486441 IL2RBP14784 551 aa20.41■□□□□ 0.86
SDCCAG3-211ENST00000486441 ANKRD24Q8TF21 1146 aa20.41■□□□□ 0.86
SDCCAG3-211ENST00000486441 AKT1S1Q96B36 256 aa20.38■□□□□ 0.85
SDCCAG3-211ENST00000486441 ARXQ96QS3 562 aa20.37■□□□□ 0.85
SDCCAG3-211ENST00000486441 KAT6BQ8WYB5 2073 aa20.37■□□□□ 0.85
SDCCAG3-211ENST00000486441 BTAF1O14981 1849 aa20.37■□□□□ 0.85
SDCCAG3-211ENST00000486441 MAP3K5Q99683 1374 aa20.36■□□□□ 0.85
SDCCAG3-211ENST00000486441 TMC1Q8TDI8 760 aa20.35■□□□□ 0.85
SDCCAG3-211ENST00000486441 IP6K1Q92551 441 aa20.35■□□□□ 0.85
SDCCAG3-211ENST00000486441 A0A1W2PP64 1363 aa20.34■□□□□ 0.85
SDCCAG3-211ENST00000486441 LTN1O94822 1766 aa20.34■□□□□ 0.85
SDCCAG3-211ENST00000486441 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
SDCCAG3-211ENST00000486441 EDC4Q6P2E9 1401 aaKnown RBP20.34■□□□□ 0.85
SDCCAG3-211ENST00000486441 FBLN1P23142 703 aa20.33■□□□□ 0.85
SDCCAG3-211ENST00000486441 HDGFL2Q7Z4V5 671 aaPredicted RBP20.32■□□□□ 0.84
SDCCAG3-211ENST00000486441 PUS7Q96PZ0 661 aaKnown RBP20.32■□□□□ 0.84
SDCCAG3-211ENST00000486441 KCNQ4P56696 695 aa20.31■□□□□ 0.84
SDCCAG3-211ENST00000486441 PNPLA7Q6ZV29 1317 aa20.3■□□□□ 0.84
SDCCAG3-211ENST00000486441 DDX54Q8TDD1 881 aaKnown RBP20.3■□□□□ 0.84
SDCCAG3-211ENST00000486441 TESK2Q96S53 571 aa20.3■□□□□ 0.84
SDCCAG3-211ENST00000486441 SLC27A3Q5K4L6 730 aa20.29■□□□□ 0.84
SDCCAG3-211ENST00000486441 NSD2O96028 1365 aa20.29■□□□□ 0.84
SDCCAG3-211ENST00000486441 CHD4Q14839 1912 aa20.29■□□□□ 0.84
SDCCAG3-211ENST00000486441 COL24A1Q17RW2 1714 aa20.28■□□□□ 0.84
SDCCAG3-211ENST00000486441 PRIM1P49642 420 aaKnown RBP20.28■□□□□ 0.84
SDCCAG3-211ENST00000486441 SLC16A10Q8TF71 515 aa20.28■□□□□ 0.84
SDCCAG3-211ENST00000486441 LTV1Q96GA3 475 aaPredicted RBP20.28■□□□□ 0.84
SDCCAG3-211ENST00000486441 TERF2IPQ9NYB0 399 aa20.28■□□□□ 0.84
SDCCAG3-211ENST00000486441 MAP3K19Q56UN5 1328 aa20.27■□□□□ 0.84
SDCCAG3-211ENST00000486441 CEP350Q5VT06 3117 aa20.27■□□□□ 0.83
SDCCAG3-211ENST00000486441 HOXC9P31274 260 aa20.26■□□□□ 0.83
SDCCAG3-211ENST00000486441 ANKRD36BQ8N2N9 1353 aa20.24■□□□□ 0.83
SDCCAG3-211ENST00000486441 FAM208AQ9UK61 1670 aaKnown RBP20.24■□□□□ 0.83
SDCCAG3-211ENST00000486441 QSER1Q2KHR3 1735 aa20.24■□□□□ 0.83
SDCCAG3-211ENST00000486441 C1QTNF8P60827 252 aa20.23■□□□□ 0.83
SDCCAG3-211ENST00000486441 NLGN2Q8NFZ4 835 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms