RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 SLC15A2Q16348 729 aa13.51□□□□□ -0.25
CCDC142-208ENST00000486335 DDB1Q16531 1140 aa13.51□□□□□ -0.25
CCDC142-208ENST00000486335 NLRP13Q86W25 1043 aa13.51□□□□□ -0.25
CCDC142-208ENST00000486335 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
CCDC142-208ENST00000486335 IFFO2Q5TF58 517 aa13.5□□□□□ -0.25
CCDC142-208ENST00000486335 COL18A1P39060 1754 aa13.5□□□□□ -0.25
CCDC142-208ENST00000486335 LRRC37A3O60309 1634 aa13.5□□□□□ -0.25
CCDC142-208ENST00000486335 NBPF1Q3BBV0 1214 aa13.49□□□□□ -0.25
CCDC142-208ENST00000486335 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
CCDC142-208ENST00000486335 CEP350Q5VT06 3117 aa13.48□□□□□ -0.25
CCDC142-208ENST00000486335 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
CCDC142-208ENST00000486335 MTFR1LQ9H019 292 aa13.48□□□□□ -0.25
CCDC142-208ENST00000486335 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
CCDC142-208ENST00000486335 TOM1L2Q6ZVM7 507 aa13.47□□□□□ -0.25
CCDC142-208ENST00000486335 ARHGEF25Q86VW2 580 aa13.47□□□□□ -0.25
CCDC142-208ENST00000486335 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
CCDC142-208ENST00000486335 WDR17Q8IZU2 1322 aa13.46□□□□□ -0.25
CCDC142-208ENST00000486335 SLIT3O75094 1523 aa13.46□□□□□ -0.25
CCDC142-208ENST00000486335 NLRP6P59044 892 aa13.46□□□□□ -0.25
CCDC142-208ENST00000486335 STK32BQ9NY57 414 aa13.46□□□□□ -0.25
CCDC142-208ENST00000486335 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
CCDC142-208ENST00000486335 RAB3GAP2Q9H2M9 1393 aa13.45□□□□□ -0.26
CCDC142-208ENST00000486335 ARXQ96QS3 562 aa13.45□□□□□ -0.26
CCDC142-208ENST00000486335 PPIP5K1Q6PFW1 1433 aa13.45□□□□□ -0.26
CCDC142-208ENST00000486335 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
CCDC142-208ENST00000486335 ZBTB7CA1YPR0 619 aa13.44□□□□□ -0.26
CCDC142-208ENST00000486335 ZNF827Q17R98 1081 aa13.44□□□□□ -0.26
CCDC142-208ENST00000486335 CARD10Q9BWT7 1032 aa13.44□□□□□ -0.26
CCDC142-208ENST00000486335 LRRC4BQ9NT99 713 aa13.44□□□□□ -0.26
CCDC142-208ENST00000486335 USP6P35125 1406 aa13.44□□□□□ -0.26
CCDC142-208ENST00000486335 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
CCDC142-208ENST00000486335 CHD4Q14839 1912 aa13.42□□□□□ -0.26
CCDC142-208ENST00000486335 BRD4O60885 1362 aaPredicted RBP13.42□□□□□ -0.26
CCDC142-208ENST00000486335 EXOC5O00471 708 aa13.41□□□□□ -0.26
CCDC142-208ENST00000486335 SRPK2P78362 688 aaKnown RBP13.41□□□□□ -0.26
CCDC142-208ENST00000486335 PAPPAQ13219 1627 aa13.4□□□□□ -0.26
CCDC142-208ENST00000486335 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
CCDC142-208ENST00000486335 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
CCDC142-208ENST00000486335 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
CCDC142-208ENST00000486335 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
CCDC142-208ENST00000486335 PIK3C2AO00443 1686 aa13.38□□□□□ -0.27
CCDC142-208ENST00000486335 NLGN2Q8NFZ4 835 aa13.38□□□□□ -0.27
CCDC142-208ENST00000486335 WNK3Q9BYP7 1800 aa13.38□□□□□ -0.27
CCDC142-208ENST00000486335 CENPJQ9HC77 1338 aaPredicted RBP13.38□□□□□ -0.27
CCDC142-208ENST00000486335 GPR162Q16538 588 aa13.37□□□□□ -0.27
CCDC142-208ENST00000486335 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
CCDC142-208ENST00000486335 YBX3P16989 372 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC142-208ENST00000486335 SHANK3Q9BYB0 1731 aa13.36□□□□□ -0.27
CCDC142-208ENST00000486335 NFAT5O94916 1531 aa13.35□□□□□ -0.27
CCDC142-208ENST00000486335 SOX12O15370 315 aa13.35□□□□□ -0.27
CCDC142-208ENST00000486335 GIGYF1O75420 1035 aaPredicted RBP13.35□□□□□ -0.27
CCDC142-208ENST00000486335 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
CCDC142-208ENST00000486335 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
CCDC142-208ENST00000486335 PNPLA7Q6ZV29 1317 aa13.35□□□□□ -0.27
CCDC142-208ENST00000486335 KCNQ4P56696 695 aa13.34□□□□□ -0.27
CCDC142-208ENST00000486335 TRPM1Q7Z4N2 1603 aa13.34□□□□□ -0.27
CCDC142-208ENST00000486335 CCDC7Q96M83 1385 aa13.33□□□□□ -0.27
CCDC142-208ENST00000486335 AKAP12Q02952 1782 aa13.33□□□□□ -0.28
CCDC142-208ENST00000486335 KCNH5Q8NCM2 988 aa13.33□□□□□ -0.28
CCDC142-208ENST00000486335 NHSQ6T4R5 1651 aa13.33□□□□□ -0.28
CCDC142-208ENST00000486335 COL24A1Q17RW2 1714 aa13.33□□□□□ -0.28
CCDC142-208ENST00000486335 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
CCDC142-208ENST00000486335 KIAA1210Q9ULL0 1709 aa13.32□□□□□ -0.28
CCDC142-208ENST00000486335 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
CCDC142-208ENST00000486335 ERBB3P21860 1342 aa13.31□□□□□ -0.28
CCDC142-208ENST00000486335 ABCC6O95255 1503 aa13.29□□□□□ -0.28
CCDC142-208ENST00000486335 IL2RBP14784 551 aa13.29□□□□□ -0.28
CCDC142-208ENST00000486335 NLRP2Q9NX02 1062 aa13.29□□□□□ -0.28
CCDC142-208ENST00000486335 TTC21AQ8NDW8 1320 aa13.29□□□□□ -0.28
CCDC142-208ENST00000486335 BTAF1O14981 1849 aa13.29□□□□□ -0.28
CCDC142-208ENST00000486335 USP31Q70CQ4 1352 aa13.28□□□□□ -0.28
CCDC142-208ENST00000486335 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.29
CCDC142-208ENST00000486335 COL23A1Q86Y22 540 aaPredicted RBP13.27□□□□□ -0.29
CCDC142-208ENST00000486335 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
CCDC142-208ENST00000486335 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
CCDC142-208ENST00000486335 NSD2O96028 1365 aa13.27□□□□□ -0.29
CCDC142-208ENST00000486335 EVC2Q86UK5 1308 aa13.26□□□□□ -0.29
CCDC142-208ENST00000486335 NME9Q86XW9 330 aa13.26□□□□□ -0.29
CCDC142-208ENST00000486335 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
CCDC142-208ENST00000486335 QRICH2Q9H0J4 1663 aa13.25□□□□□ -0.29
CCDC142-208ENST00000486335 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
CCDC142-208ENST00000486335 ATP10DQ9P241 1426 aa13.25□□□□□ -0.29
CCDC142-208ENST00000486335 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
CCDC142-208ENST00000486335 POLD1P28340 1107 aa13.25□□□□□ -0.29
CCDC142-208ENST00000486335 PRIM1P49642 420 aaKnown RBP13.25□□□□□ -0.29
CCDC142-208ENST00000486335 KAT6BQ8WYB5 2073 aa13.25□□□□□ -0.29
CCDC142-208ENST00000486335 ADCY9O60503 1353 aa13.24□□□□□ -0.29
CCDC142-208ENST00000486335 GRIN3BO60391 1043 aa13.24□□□□□ -0.29
CCDC142-208ENST00000486335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC142-208ENST00000486335 DDX54Q8TDD1 881 aaKnown RBP13.24□□□□□ -0.29
CCDC142-208ENST00000486335 TFCP2L1Q9NZI6 479 aa13.24□□□□□ -0.29
CCDC142-208ENST00000486335 TUBGCP6Q96RT7 1819 aa13.24□□□□□ -0.29
CCDC142-208ENST00000486335 KTN1Q86UP2 1357 aaKnown RBP13.23□□□□□ -0.29
CCDC142-208ENST00000486335 QSER1Q2KHR3 1735 aa13.23□□□□□ -0.29
CCDC142-208ENST00000486335 HSPA6P17066 643 aa13.23□□□□□ -0.29
CCDC142-208ENST00000486335 L3MBTL2Q969R5 705 aa13.23□□□□□ -0.29
CCDC142-208ENST00000486335 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
CCDC142-208ENST00000486335 FBLN1P23142 703 aa13.21□□□□□ -0.29
CCDC142-208ENST00000486335 MSL1Q68DK7 614 aa13.21□□□□□ -0.29
CCDC142-208ENST00000486335 IP6K1Q92551 441 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms