RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 PUS7Q96PZ0 661 aaKnown RBP31.75■■■□□ 2.67
SREBF1-214ENST00000486311 USP31Q70CQ4 1352 aa31.75■■■□□ 2.67
SREBF1-214ENST00000486311 PARD3Q8TEW0 1356 aa31.75■■■□□ 2.67
SREBF1-214ENST00000486311 PARP4Q9UKK3 1724 aaKnown RBP31.74■■■□□ 2.67
SREBF1-214ENST00000486311 NFAT5O94916 1531 aa31.74■■■□□ 2.67
SREBF1-214ENST00000486311 C11orf95C9JLR9 678 aaPredicted RBP31.73■■■□□ 2.67
SREBF1-214ENST00000486311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.73■■■□□ 2.67
SREBF1-214ENST00000486311 SLC12A5Q9H2X9 1139 aa31.73■■■□□ 2.67
SREBF1-214ENST00000486311 HDGFL2Q7Z4V5 671 aaPredicted RBP31.72■■■□□ 2.67
SREBF1-214ENST00000486311 MON2Q7Z3U7 1717 aa31.72■■■□□ 2.67
SREBF1-214ENST00000486311 DDB1Q16531 1140 aa31.7■■■□□ 2.67
SREBF1-214ENST00000486311 R3HDM1Q15032 1099 aaKnown RBP31.69■■■□□ 2.66
SREBF1-214ENST00000486311 NME9Q86XW9 330 aa31.69■■■□□ 2.66
SREBF1-214ENST00000486311 CDCA7Q9BWT1 371 aaPredicted RBP31.69■■■□□ 2.66
SREBF1-214ENST00000486311 CARD10Q9BWT7 1032 aa31.69■■■□□ 2.66
SREBF1-214ENST00000486311 OVOS2A0A0G2JMS6 1433 aa31.68■■■□□ 2.66
SREBF1-214ENST00000486311 OVOS2A0A0J9YW53 1432 aa31.68■■■□□ 2.66
SREBF1-214ENST00000486311 OVOS2Q6IE36 1432 aa31.68■■■□□ 2.66
SREBF1-214ENST00000486311 TESK2Q96S53 571 aa31.68■■■□□ 2.66
SREBF1-214ENST00000486311 CSB-PGBD3P0DP91 1061 aa31.67■■■□□ 2.66
SREBF1-214ENST00000486311 TERF2IPQ9NYB0 399 aa31.67■■■□□ 2.66
SREBF1-214ENST00000486311 EDC4Q6P2E9 1401 aaKnown RBP31.66■■■□□ 2.66
SREBF1-214ENST00000486311 ABCC6O95255 1503 aa31.66■■■□□ 2.66
SREBF1-214ENST00000486311 ST20-MTHFSA0A0A6YYL1 179 aa31.65■■■□□ 2.66
SREBF1-214ENST00000486311 A0A1W2PP64 1363 aa31.65■■■□□ 2.66
SREBF1-214ENST00000486311 LRRC37A3O60309 1634 aa31.64■■■□□ 2.65
SREBF1-214ENST00000486311 SLC24A1O60721 1099 aa31.62■■■□□ 2.65
SREBF1-214ENST00000486311 USP54Q70EL1 1684 aa31.62■■■□□ 2.65
SREBF1-214ENST00000486311 PEAK1Q9H792 1746 aa31.61■■■□□ 2.65
SREBF1-214ENST00000486311 NINLQ9Y2I6 1382 aa31.61■■■□□ 2.65
SREBF1-214ENST00000486311 CCDC7Q96M83 1385 aa31.6■■■□□ 2.65
SREBF1-214ENST00000486311 MARCH10Q8NA82 808 aaPredicted RBP31.59■■■□□ 2.65
SREBF1-214ENST00000486311 BCL9O00512 1426 aa31.58■■■□□ 2.65
SREBF1-214ENST00000486311 ERBB3P21860 1342 aa31.57■■■□□ 2.64
SREBF1-214ENST00000486311 RREB1Q92766 1687 aa31.55■■■□□ 2.64
SREBF1-214ENST00000486311 NBPF14Q5TI25 921 aa31.55■■■□□ 2.64
SREBF1-214ENST00000486311 BCL11BQ9C0K0 894 aaPredicted RBP31.55■■■□□ 2.64
SREBF1-214ENST00000486311 EXOC5O00471 708 aa31.54■■■□□ 2.64
SREBF1-214ENST00000486311 WNK3Q9BYP7 1800 aa31.54■■■□□ 2.64
SREBF1-214ENST00000486311 RGPD5Q99666 1765 aa31.53■■■□□ 2.64
SREBF1-214ENST00000486311 PLSCR1O15162 318 aa31.53■■■□□ 2.64
SREBF1-214ENST00000486311 NLRP2Q9NX02 1062 aa31.51■■■□□ 2.63
SREBF1-214ENST00000486311 PTF1AQ7RTS3 328 aa31.5■■■□□ 2.63
SREBF1-214ENST00000486311 NUP188Q5SRE5 1749 aa31.49■■■□□ 2.63
SREBF1-214ENST00000486311 USP47Q96K76 1375 aa31.49■■■□□ 2.63
SREBF1-214ENST00000486311 ANKRD24Q8TF21 1146 aa31.49■■■□□ 2.63
SREBF1-214ENST00000486311 TNS2Q63HR2 1409 aa31.49■■■□□ 2.63
SREBF1-214ENST00000486311 TMF1P82094 1093 aa31.47■■■□□ 2.63
SREBF1-214ENST00000486311 ANKRD36BQ8N2N9 1353 aa31.46■■■□□ 2.63
SREBF1-214ENST00000486311 IP6K1Q92551 441 aa31.45■■■□□ 2.63
SREBF1-214ENST00000486311 COG3Q96JB2 828 aa31.45■■■□□ 2.63
SREBF1-214ENST00000486311 IL2RBP14784 551 aa31.44■■■□□ 2.62
SREBF1-214ENST00000486311 SBF2Q86WG5 1849 aa31.44■■■□□ 2.62
SREBF1-214ENST00000486311 RGPD3A6NKT7 1758 aaPredicted RBP31.43■■■□□ 2.62
SREBF1-214ENST00000486311 LTN1O94822 1766 aa31.43■■■□□ 2.62
SREBF1-214ENST00000486311 RGPD4Q7Z3J3 1758 aa31.43■■■□□ 2.62
SREBF1-214ENST00000486311 TIMELESSQ9UNS1 1208 aa31.42■■■□□ 2.62
SREBF1-214ENST00000486311 PROM2Q8N271 834 aa31.4■■■□□ 2.62
SREBF1-214ENST00000486311 MAP3K19Q56UN5 1328 aa31.39■■■□□ 2.62
SREBF1-214ENST00000486311 CDCA8Q53HL2 280 aa31.37■■■□□ 2.61
SREBF1-214ENST00000486311 CLSPNQ9HAW4 1339 aa31.36■■■□□ 2.61
SREBF1-214ENST00000486311 KCNQ2O43526 872 aa31.36■■■□□ 2.61
SREBF1-214ENST00000486311 ANO8Q9HCE9 1232 aaPredicted RBP31.36■■■□□ 2.61
SREBF1-214ENST00000486311 LTV1Q96GA3 475 aaPredicted RBP31.35■■■□□ 2.61
SREBF1-214ENST00000486311 FYB1O15117 783 aa31.34■■■□□ 2.61
SREBF1-214ENST00000486311 FBLN1P23142 703 aa31.34■■■□□ 2.61
SREBF1-214ENST00000486311 HOXC9P31274 260 aa31.34■■■□□ 2.61
SREBF1-214ENST00000486311 AMPHP49418 695 aa31.33■■■□□ 2.61
SREBF1-214ENST00000486311 TXNRD1Q16881 649 aa31.33■■■□□ 2.61
SREBF1-214ENST00000486311 ACSBG1Q96GR2 724 aa31.31■■■□□ 2.6
SREBF1-214ENST00000486311 SPON1Q9HCB6 807 aa31.31■■■□□ 2.6
SREBF1-214ENST00000486311 GGNBP2Q9H3C7 697 aa31.3■■■□□ 2.6
SREBF1-214ENST00000486311 PCGF6Q9BYE7 350 aa31.29■■■□□ 2.6
SREBF1-214ENST00000486311 RTL1A6NKG5 1358 aa31.29■■■□□ 2.6
SREBF1-214ENST00000486311 NHSQ6T4R5 1651 aa31.27■■■□□ 2.6
SREBF1-214ENST00000486311 RRS1Q15050 365 aaKnown RBP31.26■■■□□ 2.59
SREBF1-214ENST00000486311 FAM208AQ9UK61 1670 aaKnown RBP31.25■■■□□ 2.59
SREBF1-214ENST00000486311 STK32BQ9NY57 414 aa31.24■■■□□ 2.59
SREBF1-214ENST00000486311 DDX54Q8TDD1 881 aaKnown RBP31.23■■■□□ 2.59
SREBF1-214ENST00000486311 SLC15A2Q16348 729 aa31.21■■■□□ 2.59
SREBF1-214ENST00000486311 CARD14Q9BXL6 1004 aa31.21■■■□□ 2.59
SREBF1-214ENST00000486311 PDGFDQ9GZP0 370 aaPredicted RBP31.2■■■□□ 2.59
SREBF1-214ENST00000486311 PPP1R1BQ9UD71 204 aaPredicted RBP31.2■■■□□ 2.59
SREBF1-214ENST00000486311 NBPF6Q5VWK0 638 aa31.18■■■□□ 2.58
SREBF1-214ENST00000486311 NBPF4Q96M43 638 aa31.18■■■□□ 2.58
SREBF1-214ENST00000486311 CASZ1Q86V15 1759 aa31.17■■■□□ 2.58
SREBF1-214ENST00000486311 ZCRB1Q8TBF4 217 aaKnown RBP31.17■■■□□ 2.58
SREBF1-214ENST00000486311 MEGF6O75095 1541 aa31.16■■■□□ 2.58
SREBF1-214ENST00000486311 KIF24Q5T7B8 1368 aa31.16■■■□□ 2.58
SREBF1-214ENST00000486311 SMG6Q86US8 1419 aaKnown RBP31.15■■■□□ 2.58
SREBF1-214ENST00000486311 NSD3Q9BZ95 1437 aa31.15■■■□□ 2.58
SREBF1-214ENST00000486311 INSRP06213 1382 aa31.15■■■□□ 2.58
SREBF1-214ENST00000486311 ZBTB7AO95365 584 aa31.14■■■□□ 2.58
SREBF1-214ENST00000486311 HSP90AB2PQ58FF8 381 aa31.14■■■□□ 2.58
SREBF1-214ENST00000486311 FLT4P35916 1363 aa31.14■■■□□ 2.58
SREBF1-214ENST00000486311 MYOM1P52179 1685 aa31.13■■■□□ 2.57
SREBF1-214ENST00000486311 CGNL1Q0VF96 1302 aa31.12■■■□□ 2.57
SREBF1-214ENST00000486311 BTAF1O14981 1849 aa31.11■■■□□ 2.57
SREBF1-214ENST00000486311 USHBP1Q8N6Y0 703 aa31.11■■■□□ 2.57
SREBF1-214ENST00000486311 PRIM1P49642 420 aaKnown RBP31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms