RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 PTGER2P43116 358 aa18.13■□□□□ 0.49
SSR4-211ENST00000486204 LARP1Q6PKG0 1096 aaKnown RBP18.13■□□□□ 0.49
SSR4-211ENST00000486204 SYT17Q9BSW7 474 aa18.13■□□□□ 0.49
SSR4-211ENST00000486204 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
SSR4-211ENST00000486204 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
SSR4-211ENST00000486204 SSH2Q76I76 1423 aa18.13■□□□□ 0.49
SSR4-211ENST00000486204 PUS7Q96PZ0 661 aaKnown RBP18.12■□□□□ 0.49
SSR4-211ENST00000486204 FHDC1Q9C0D6 1143 aaPredicted RBP18.12■□□□□ 0.49
SSR4-211ENST00000486204 CABP1Q9NZU7 370 aa18.12■□□□□ 0.49
SSR4-211ENST00000486204 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
SSR4-211ENST00000486204 THRAP3Q9Y2W1 955 aaKnown RBP18.11■□□□□ 0.49
SSR4-211ENST00000486204 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
SSR4-211ENST00000486204 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
SSR4-211ENST00000486204 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
SSR4-211ENST00000486204 BCL11BQ9C0K0 894 aaPredicted RBP18.1■□□□□ 0.49
SSR4-211ENST00000486204 TMF1P82094 1093 aa18.09■□□□□ 0.49
SSR4-211ENST00000486204 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
SSR4-211ENST00000486204 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.49
SSR4-211ENST00000486204 CASZ1Q86V15 1759 aa18.08■□□□□ 0.48
SSR4-211ENST00000486204 GIGYF1O75420 1035 aaPredicted RBP18.06■□□□□ 0.48
SSR4-211ENST00000486204 PROM2Q8N271 834 aa18.06■□□□□ 0.48
SSR4-211ENST00000486204 A0A1W2PP64 1363 aa18.05■□□□□ 0.48
SSR4-211ENST00000486204 SLC12A5Q9H2X9 1139 aa18.05■□□□□ 0.48
SSR4-211ENST00000486204 OVOS2A0A0G2JMS6 1433 aa18.05■□□□□ 0.48
SSR4-211ENST00000486204 OVOS2A0A0J9YW53 1432 aa18.05■□□□□ 0.48
SSR4-211ENST00000486204 OVOS2Q6IE36 1432 aa18.05■□□□□ 0.48
SSR4-211ENST00000486204 SLIT3O75094 1523 aa18.04■□□□□ 0.48
SSR4-211ENST00000486204 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
SSR4-211ENST00000486204 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
SSR4-211ENST00000486204 PTF1AQ7RTS3 328 aa18.03■□□□□ 0.48
SSR4-211ENST00000486204 MTFR1LQ9H019 292 aa18.03■□□□□ 0.48
SSR4-211ENST00000486204 CHD4Q14839 1912 aa18.03■□□□□ 0.48
SSR4-211ENST00000486204 RGPD3A6NKT7 1758 aaPredicted RBP18.02■□□□□ 0.48
SSR4-211ENST00000486204 RGPD4Q7Z3J3 1758 aa18.02■□□□□ 0.48
SSR4-211ENST00000486204 EDC4Q6P2E9 1401 aaKnown RBP18.02■□□□□ 0.48
SSR4-211ENST00000486204 ANKRD36BQ8N2N9 1353 aa18.02■□□□□ 0.47
SSR4-211ENST00000486204 LTN1O94822 1766 aa18.02■□□□□ 0.47
SSR4-211ENST00000486204 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
SSR4-211ENST00000486204 SLC15A2Q16348 729 aa18.01■□□□□ 0.47
SSR4-211ENST00000486204 DDB1Q16531 1140 aa18.01■□□□□ 0.47
SSR4-211ENST00000486204 TMC1Q8TDI8 760 aa18.01■□□□□ 0.47
SSR4-211ENST00000486204 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
SSR4-211ENST00000486204 USP19O94966 1318 aa18■□□□□ 0.47
SSR4-211ENST00000486204 LMO7Q8WWI1 1683 aa18■□□□□ 0.47
SSR4-211ENST00000486204 RGPD5Q99666 1765 aa18■□□□□ 0.47
SSR4-211ENST00000486204 GPR162Q16538 588 aa18■□□□□ 0.47
SSR4-211ENST00000486204 CDCA8Q53HL2 280 aa18■□□□□ 0.47
SSR4-211ENST00000486204 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
SSR4-211ENST00000486204 CPDO75976 1380 aa18■□□□□ 0.47
SSR4-211ENST00000486204 PARP4Q9UKK3 1724 aaKnown RBP18■□□□□ 0.47
SSR4-211ENST00000486204 TTC21BQ7Z4L5 1316 aa17.99■□□□□ 0.47
SSR4-211ENST00000486204 TXNRD1Q16881 649 aa17.99■□□□□ 0.47
SSR4-211ENST00000486204 ABTB2Q8N961 1025 aa17.99■□□□□ 0.47
SSR4-211ENST00000486204 ARXQ96QS3 562 aa17.99■□□□□ 0.47
SSR4-211ENST00000486204 COL18A1P39060 1754 aa17.99■□□□□ 0.47
SSR4-211ENST00000486204 PEAK1Q9H792 1746 aa17.98■□□□□ 0.47
SSR4-211ENST00000486204 NFAT5O94916 1531 aa17.98■□□□□ 0.47
SSR4-211ENST00000486204 TTC21AQ8NDW8 1320 aa17.98■□□□□ 0.47
SSR4-211ENST00000486204 HDGFL2Q7Z4V5 671 aaPredicted RBP17.97■□□□□ 0.47
SSR4-211ENST00000486204 TERF2IPQ9NYB0 399 aa17.97■□□□□ 0.47
SSR4-211ENST00000486204 CRB1P82279 1406 aa17.97■□□□□ 0.47
SSR4-211ENST00000486204 CEP350Q5VT06 3117 aa17.96■□□□□ 0.47
SSR4-211ENST00000486204 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
SSR4-211ENST00000486204 USP31Q70CQ4 1352 aa17.95■□□□□ 0.46
SSR4-211ENST00000486204 GCP02774 474 aa17.95■□□□□ 0.46
SSR4-211ENST00000486204 MARCH10Q8NA82 808 aaPredicted RBP17.95■□□□□ 0.46
SSR4-211ENST00000486204 SBF2Q86WG5 1849 aa17.95■□□□□ 0.46
SSR4-211ENST00000486204 NLRP13Q86W25 1043 aa17.94■□□□□ 0.46
SSR4-211ENST00000486204 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
SSR4-211ENST00000486204 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
SSR4-211ENST00000486204 TOM1L2Q6ZVM7 507 aa17.93■□□□□ 0.46
SSR4-211ENST00000486204 KIF7Q2M1P5 1343 aa17.93■□□□□ 0.46
SSR4-211ENST00000486204 BCL9O00512 1426 aa17.91■□□□□ 0.46
SSR4-211ENST00000486204 NLRP6P59044 892 aa17.91■□□□□ 0.46
SSR4-211ENST00000486204 NME9Q86XW9 330 aa17.91■□□□□ 0.46
SSR4-211ENST00000486204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.91■□□□□ 0.46
SSR4-211ENST00000486204 LRRC37A3O60309 1634 aa17.9■□□□□ 0.46
SSR4-211ENST00000486204 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
SSR4-211ENST00000486204 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
SSR4-211ENST00000486204 CDCA7Q9BWT1 371 aaPredicted RBP17.9■□□□□ 0.46
SSR4-211ENST00000486204 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
SSR4-211ENST00000486204 CCDC7Q96M83 1385 aa17.89■□□□□ 0.45
SSR4-211ENST00000486204 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
SSR4-211ENST00000486204 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
SSR4-211ENST00000486204 ABCC6O95255 1503 aa17.88■□□□□ 0.45
SSR4-211ENST00000486204 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
SSR4-211ENST00000486204 POLR3GLQ9BT43 218 aa17.88■□□□□ 0.45
SSR4-211ENST00000486204 WASHC2AQ641Q2 1341 aa17.87■□□□□ 0.45
SSR4-211ENST00000486204 AATKQ6ZMQ8 1374 aa17.87■□□□□ 0.45
SSR4-211ENST00000486204 EXOC5O00471 708 aa17.85■□□□□ 0.45
SSR4-211ENST00000486204 FYB1O15117 783 aa17.84■□□□□ 0.45
SSR4-211ENST00000486204 ZEB1P37275 1124 aaPredicted RBP17.84■□□□□ 0.45
SSR4-211ENST00000486204 SHANK3Q9BYB0 1731 aa17.84■□□□□ 0.45
SSR4-211ENST00000486204 WDR17Q8IZU2 1322 aa17.83■□□□□ 0.44
SSR4-211ENST00000486204 RGPD2P0DJD1 1756 aa17.83■□□□□ 0.44
SSR4-211ENST00000486204 FAM208AQ9UK61 1670 aaKnown RBP17.83■□□□□ 0.44
SSR4-211ENST00000486204 POLD1P28340 1107 aa17.82■□□□□ 0.44
SSR4-211ENST00000486204 KCNH5Q8NCM2 988 aa17.82■□□□□ 0.44
SSR4-211ENST00000486204 PANK3Q9H999 370 aa17.82■□□□□ 0.44
SSR4-211ENST00000486204 AXIN2Q9Y2T1 843 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms