RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	KRT27	Q7Z3Y8	459 aa		18.89	■□□□□ 0.61
SCAP-211	ENST00000485967	CNGB1	Q14028	1251 aa	Predicted RBP	18.88	■□□□□ 0.61
SCAP-211	ENST00000485967	OVOS2	A0A0J9YW53	1432 aa		18.87	■□□□□ 0.61
SCAP-211	ENST00000485967	PER1	O15534	1290 aa	Predicted RBP	18.87	■□□□□ 0.61
SCAP-211	ENST00000485967	SLIT3	O75094	1523 aa		18.87	■□□□□ 0.61
SCAP-211	ENST00000485967	OVOS2	Q6IE36	1432 aa		18.87	■□□□□ 0.61
SCAP-211	ENST00000485967	MORC1	Q86VD1	984 aa		18.87	■□□□□ 0.61
SCAP-211	ENST00000485967	CPD	O75976	1380 aa		18.86	■□□□□ 0.61
SCAP-211	ENST00000485967	EVA1C	P58658	441 aa		18.86	■□□□□ 0.61
SCAP-211	ENST00000485967	FAM98C	Q17RN3	349 aa	Known RBP	18.86	■□□□□ 0.61
SCAP-211	ENST00000485967	ARHGEF25	Q86VW2	580 aa		18.86	■□□□□ 0.61
SCAP-211	ENST00000485967	RGPD1	P0DJD0	1748 aa		18.86	■□□□□ 0.61
SCAP-211	ENST00000485967	NSD2	O96028	1365 aa		18.85	■□□□□ 0.61
SCAP-211	ENST00000485967	SPATA31A5	Q5VU36	1347 aa		18.85	■□□□□ 0.61
SCAP-211	ENST00000485967	SPATA31A7	Q8IWB4	1347 aa		18.85	■□□□□ 0.61
SCAP-211	ENST00000485967	TNNT2	P45379	298 aa	Predicted RBP	18.85	■□□□□ 0.61
SCAP-211	ENST00000485967	SF3B2	Q13435	895 aa	Known RBP	18.85	■□□□□ 0.61
SCAP-211	ENST00000485967	LRP5	O75197	1615 aa		18.85	■□□□□ 0.61
SCAP-211	ENST00000485967	KIF20B	Q96Q89	1820 aa		18.84	■□□□□ 0.61
SCAP-211	ENST00000485967	TNS1	Q9HBL0	1735 aa	Known RBP	18.84	■□□□□ 0.61
SCAP-211	ENST00000485967		A0A0G2JS52	829 aa		18.84	■□□□□ 0.61
SCAP-211	ENST00000485967	FBLN1	P23142	703 aa		18.84	■□□□□ 0.61
SCAP-211	ENST00000485967	MYT1	Q01538	1121 aa		18.84	■□□□□ 0.61
SCAP-211	ENST00000485967	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.84	■□□□□ 0.61
SCAP-211	ENST00000485967	CC2D1B	Q5T0F9	858 aa	Known RBP	18.84	■□□□□ 0.61
SCAP-211	ENST00000485967	AMPH	P49418	695 aa		18.83	■□□□□ 0.6
SCAP-211	ENST00000485967	STRN4	Q9NRL3	753 aa		18.82	■□□□□ 0.6
SCAP-211	ENST00000485967	USP54	Q70EL1	1684 aa		18.82	■□□□□ 0.6
SCAP-211	ENST00000485967	AATK	Q6ZMQ8	1374 aa		18.81	■□□□□ 0.6
SCAP-211	ENST00000485967	RRS1	Q15050	365 aa	Known RBP	18.81	■□□□□ 0.6
SCAP-211	ENST00000485967	PPM1G	O15355	546 aa	Predicted RBP	18.8	■□□□□ 0.6
SCAP-211	ENST00000485967	DISP2	A7MBM2	1401 aa		18.8	■□□□□ 0.6
SCAP-211	ENST00000485967	NFAT5	O94916	1531 aa		18.79	■□□□□ 0.6
SCAP-211	ENST00000485967	LMO7	Q8WWI1	1683 aa		18.79	■□□□□ 0.6
SCAP-211	ENST00000485967	MAP3K19	Q56UN5	1328 aa		18.79	■□□□□ 0.6
SCAP-211	ENST00000485967	CSB-PGBD3	P0DP91	1061 aa		18.78	■□□□□ 0.6
SCAP-211	ENST00000485967	BAG6	P46379	1132 aa		18.78	■□□□□ 0.6
SCAP-211	ENST00000485967	IP6K1	Q92551	441 aa		18.78	■□□□□ 0.6
SCAP-211	ENST00000485967	AXIN2	Q9Y2T1	843 aa		18.78	■□□□□ 0.6
SCAP-211	ENST00000485967	SPATA31A1	Q5TZJ5	1347 aa		18.77	■□□□□ 0.6
SCAP-211	ENST00000485967	NPC1L1	Q9UHC9	1359 aa		18.77	■□□□□ 0.6
SCAP-211	ENST00000485967	HOXC9	P31274	260 aa		18.75	■□□□□ 0.59
SCAP-211	ENST00000485967	FAM182B	Q5T319	152 aa		18.75	■□□□□ 0.59
SCAP-211	ENST00000485967	LTV1	Q96GA3	475 aa	Predicted RBP	18.75	■□□□□ 0.59
SCAP-211	ENST00000485967	POLK	Q9UBT6	870 aa		18.75	■□□□□ 0.59
SCAP-211	ENST00000485967	EMILIN1	Q9Y6C2	1016 aa		18.75	■□□□□ 0.59
SCAP-211	ENST00000485967	CAMTA1	Q9Y6Y1	1673 aa		18.75	■□□□□ 0.59
SCAP-211	ENST00000485967	LARP1	Q6PKG0	1096 aa	Known RBP	18.74	■□□□□ 0.59
SCAP-211	ENST00000485967	TOM1L2	Q6ZVM7	507 aa		18.74	■□□□□ 0.59
SCAP-211	ENST00000485967	ANKRD24	Q8TF21	1146 aa		18.73	■□□□□ 0.59
SCAP-211	ENST00000485967	USP35	Q9P2H5	1018 aa		18.73	■□□□□ 0.59
SCAP-211	ENST00000485967	ANKRD26	Q9UPS8	1709 aa		18.73	■□□□□ 0.59
SCAP-211	ENST00000485967	EN1	Q05925	392 aa	Predicted RBP	18.72	■□□□□ 0.59
SCAP-211	ENST00000485967	LTN1	O94822	1766 aa		18.72	■□□□□ 0.59
SCAP-211	ENST00000485967	RTL1	A6NKG5	1358 aa		18.71	■□□□□ 0.59
SCAP-211	ENST00000485967	KIF24	Q5T7B8	1368 aa		18.71	■□□□□ 0.59
SCAP-211	ENST00000485967	PSD	A5PKW4	1024 aa	Predicted RBP	18.71	■□□□□ 0.59
SCAP-211	ENST00000485967	HSP90AB2P	Q58FF8	381 aa		18.71	■□□□□ 0.59
SCAP-211	ENST00000485967	NLRP2	Q9NX02	1062 aa		18.71	■□□□□ 0.59
SCAP-211	ENST00000485967	WDR17	Q8IZU2	1322 aa		18.71	■□□□□ 0.59
SCAP-211	ENST00000485967	COL5A2	P05997	1499 aa	Predicted RBP	18.71	■□□□□ 0.59
SCAP-211	ENST00000485967	COL18A1	P39060	1754 aa		18.7	■□□□□ 0.58
SCAP-211	ENST00000485967	FLT4	P35916	1363 aa		18.7	■□□□□ 0.58
SCAP-211	ENST00000485967	ABCC6	O95255	1503 aa		18.69	■□□□□ 0.58
SCAP-211	ENST00000485967	PARP4	Q9UKK3	1724 aa	Known RBP	18.69	■□□□□ 0.58
SCAP-211	ENST00000485967	MTHFS	P49914	203 aa		18.69	■□□□□ 0.58
SCAP-211	ENST00000485967	MAP2	P11137	1827 aa	Known RBP	18.69	■□□□□ 0.58
SCAP-211	ENST00000485967	RREB1	Q92766	1687 aa		18.69	■□□□□ 0.58
SCAP-211	ENST00000485967	ERBB3	P21860	1342 aa		18.69	■□□□□ 0.58
SCAP-211	ENST00000485967	BARGIN	Q6ZT62	677 aa		18.68	■□□□□ 0.58
SCAP-211	ENST00000485967	INSR	P06213	1382 aa		18.68	■□□□□ 0.58
SCAP-211	ENST00000485967	CRB1	P82279	1406 aa		18.67	■□□□□ 0.58
SCAP-211	ENST00000485967	SMG6	Q86US8	1419 aa	Known RBP	18.67	■□□□□ 0.58
SCAP-211	ENST00000485967	FAM196A	Q6ZSG2	479 aa		18.67	■□□□□ 0.58
SCAP-211	ENST00000485967	TCP11L2	Q8N4U5	519 aa		18.67	■□□□□ 0.58
SCAP-211	ENST00000485967	CARD10	Q9BWT7	1032 aa		18.67	■□□□□ 0.58
SCAP-211	ENST00000485967	RGPD5	Q99666	1765 aa		18.67	■□□□□ 0.58
SCAP-211	ENST00000485967	PARD3	Q8TEW0	1356 aa		18.67	■□□□□ 0.58
SCAP-211	ENST00000485967	RALBP1	Q15311	655 aa		18.66	■□□□□ 0.58
SCAP-211	ENST00000485967	THRAP3	Q9Y2W1	955 aa	Known RBP	18.66	■□□□□ 0.58
SCAP-211	ENST00000485967	NUP188	Q5SRE5	1749 aa		18.66	■□□□□ 0.58
SCAP-211	ENST00000485967	TRIM37	O94972	964 aa		18.65	■□□□□ 0.58
SCAP-211	ENST00000485967	PPP2R1A	P30153	589 aa		18.64	■□□□□ 0.57
SCAP-211	ENST00000485967	EZH2	Q15910	746 aa	Known RBP	18.64	■□□□□ 0.57
SCAP-211	ENST00000485967	CAMKK2	Q96RR4	588 aa		18.64	■□□□□ 0.57
SCAP-211	ENST00000485967	LRRC37A3	O60309	1634 aa		18.63	■□□□□ 0.57
SCAP-211	ENST00000485967	R3HDM1	Q15032	1099 aa	Known RBP	18.63	■□□□□ 0.57
SCAP-211	ENST00000485967	CFAP53	Q96M91	514 aa		18.63	■□□□□ 0.57
SCAP-211	ENST00000485967	PEAK1	Q9H792	1746 aa		18.63	■□□□□ 0.57
SCAP-211	ENST00000485967	WNK3	Q9BYP7	1800 aa		18.63	■□□□□ 0.57
SCAP-211	ENST00000485967	EIF4A2	Q14240	407 aa	Known RBP	18.61	■□□□□ 0.57
SCAP-211	ENST00000485967	NBPF6	Q5VWK0	638 aa		18.61	■□□□□ 0.57
SCAP-211	ENST00000485967	NBPF4	Q96M43	638 aa		18.61	■□□□□ 0.57
SCAP-211	ENST00000485967	PDE3B	Q13370	1112 aa		18.6	■□□□□ 0.57
SCAP-211	ENST00000485967	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.6	■□□□□ 0.57
SCAP-211	ENST00000485967	ANP32C	O43423	234 aa		18.59	■□□□□ 0.57
SCAP-211	ENST00000485967	DIAPH1	O60610	1272 aa	Known RBP	18.59	■□□□□ 0.57
SCAP-211	ENST00000485967	USHBP1	Q8N6Y0	703 aa		18.59	■□□□□ 0.57
SCAP-211	ENST00000485967	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.58	■□□□□ 0.57
SCAP-211	ENST00000485967	RGPD4	Q7Z3J3	1758 aa		18.58	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms