RNA–Protein interactions for RNA: ENST00000485744.5

HMCN1-204, Transcript of hemicentin 1, humanhuman

TSL 2

Gene HMCN1, Length 1,884 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-204ENST00000485744 CDK12Q9NYV4 1490 aaPredicted RBP13.87□□□□□ -0.19
HMCN1-204ENST00000485744 FLT4P35916 1363 aa13.87□□□□□ -0.19
HMCN1-204ENST00000485744 FAM83GA6ND36 823 aa13.87□□□□□ -0.19
HMCN1-204ENST00000485744 PRDM11Q9NQV5 511 aa13.87□□□□□ -0.19
HMCN1-204ENST00000485744 PLCH1Q4KWH8 1693 aa13.86□□□□□ -0.19
HMCN1-204ENST00000485744 LMO7Q8WWI1 1683 aa13.86□□□□□ -0.19
HMCN1-204ENST00000485744 CPDO75976 1380 aa13.86□□□□□ -0.19
HMCN1-204ENST00000485744 LTV1Q96GA3 475 aaPredicted RBP13.85□□□□□ -0.19
HMCN1-204ENST00000485744 CAMTA1Q9Y6Y1 1673 aa13.85□□□□□ -0.19
HMCN1-204ENST00000485744 CCER2I3L3R5 266 aa13.84□□□□□ -0.19
HMCN1-204ENST00000485744 IP6K1Q92551 441 aa13.84□□□□□ -0.19
HMCN1-204ENST00000485744 COL14A1Q05707 1796 aaKnown RBP13.84□□□□□ -0.19
HMCN1-204ENST00000485744 RTL1A6NKG5 1358 aa13.83□□□□□ -0.19
HMCN1-204ENST00000485744 SPATA31A6Q5VVP1 1343 aa13.83□□□□□ -0.2
HMCN1-204ENST00000485744 EIF4A2Q14240 407 aaKnown RBP13.83□□□□□ -0.2
HMCN1-204ENST00000485744 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
HMCN1-204ENST00000485744 INSRP06213 1382 aa13.82□□□□□ -0.2
HMCN1-204ENST00000485744 FAM9BQ8IZU0 186 aa13.82□□□□□ -0.2
HMCN1-204ENST00000485744 RGPD1P0DJD0 1748 aa13.81□□□□□ -0.2
HMCN1-204ENST00000485744 DIAPH1O60610 1272 aaKnown RBP13.81□□□□□ -0.2
HMCN1-204ENST00000485744 IL13P35225 146 aa13.81□□□□□ -0.2
HMCN1-204ENST00000485744 C8orf37Q96NL8 207 aa13.81□□□□□ -0.2
HMCN1-204ENST00000485744 BTG4Q9NY30 223 aa13.81□□□□□ -0.2
HMCN1-204ENST00000485744 KIF24Q5T7B8 1368 aa13.81□□□□□ -0.2
HMCN1-204ENST00000485744 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
HMCN1-204ENST00000485744 U2SURPO15042 1029 aaKnown RBP13.8□□□□□ -0.2
HMCN1-204ENST00000485744 PNISRQ8TF01 805 aaKnown RBP13.8□□□□□ -0.2
HMCN1-204ENST00000485744 ANKRD24Q8TF21 1146 aa13.8□□□□□ -0.2
HMCN1-204ENST00000485744 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
HMCN1-204ENST00000485744 ERBB3P21860 1342 aa13.8□□□□□ -0.2
HMCN1-204ENST00000485744 SENP3-EIF4A1A0A087X0R7 540 aa13.8□□□□□ -0.2
HMCN1-204ENST00000485744 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
HMCN1-204ENST00000485744 NRAPQ86VF7 1730 aa13.8□□□□□ -0.2
HMCN1-204ENST00000485744 ABCC6O95255 1503 aa13.79□□□□□ -0.2
HMCN1-204ENST00000485744 USHBP1Q8N6Y0 703 aa13.79□□□□□ -0.2
HMCN1-204ENST00000485744 MEX3CQ5U5Q3 659 aaKnown RBP13.78□□□□□ -0.2
HMCN1-204ENST00000485744 ADAMTS8Q9UP79 889 aa13.78□□□□□ -0.2
HMCN1-204ENST00000485744 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
HMCN1-204ENST00000485744 HMOX1P09601 288 aa13.78□□□□□ -0.2
HMCN1-204ENST00000485744 U2AF1L5P0DN76 240 aaPredicted RBP13.78□□□□□ -0.2
HMCN1-204ENST00000485744 U2AF1Q01081 240 aaKnown RBP eCLIP13.78□□□□□ -0.2
HMCN1-204ENST00000485744 NBPF6Q5VWK0 638 aa13.78□□□□□ -0.2
HMCN1-204ENST00000485744 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
HMCN1-204ENST00000485744 NGLY1Q96IV0 654 aa13.78□□□□□ -0.2
HMCN1-204ENST00000485744 NBPF4Q96M43 638 aa13.78□□□□□ -0.2
HMCN1-204ENST00000485744 EYA1Q99502 592 aa13.78□□□□□ -0.2
HMCN1-204ENST00000485744 WDR43Q15061 677 aaKnown RBP eCLIP13.77□□□□□ -0.21
HMCN1-204ENST00000485744 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.21
HMCN1-204ENST00000485744 ILDR1Q86SU0 546 aaPredicted RBP13.77□□□□□ -0.21
HMCN1-204ENST00000485744 SLIT2O94813 1529 aa13.77□□□□□ -0.21
HMCN1-204ENST00000485744 FAM208AQ9UK61 1670 aaKnown RBP13.77□□□□□ -0.21
HMCN1-204ENST00000485744 CSB-PGBD3P0DP91 1061 aa13.76□□□□□ -0.21
HMCN1-204ENST00000485744 NLRP2Q9NX02 1062 aa13.76□□□□□ -0.21
HMCN1-204ENST00000485744 EVA1CP58658 441 aa13.75□□□□□ -0.21
HMCN1-204ENST00000485744 CCDC146Q8IYE0 955 aa13.75□□□□□ -0.21
HMCN1-204ENST00000485744 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
HMCN1-204ENST00000485744 NUDCQ9Y266 331 aa13.75□□□□□ -0.21
HMCN1-204ENST00000485744 BCL9LQ86UU0 1499 aa13.75□□□□□ -0.21
HMCN1-204ENST00000485744 WDR17Q8IZU2 1322 aa13.75□□□□□ -0.21
HMCN1-204ENST00000485744 SULT6B1Q6IMI4 303 aa13.74□□□□□ -0.21
HMCN1-204ENST00000485744 IGSF1Q8N6C5 1336 aa13.74□□□□□ -0.21
HMCN1-204ENST00000485744 TOM1L2Q6ZVM7 507 aa13.74□□□□□ -0.21
HMCN1-204ENST00000485744 EP400Q96L91 3159 aa13.74□□□□□ -0.21
HMCN1-204ENST00000485744 AFF2P51816 1311 aa13.73□□□□□ -0.21
HMCN1-204ENST00000485744 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.73□□□□□ -0.21
HMCN1-204ENST00000485744 FNBP4Q8N3X1 1017 aaPredicted RBP13.72□□□□□ -0.21
HMCN1-204ENST00000485744 RSPH6AQ9H0K4 717 aa13.72□□□□□ -0.21
HMCN1-204ENST00000485744 USP21Q9UK80 565 aa13.72□□□□□ -0.21
HMCN1-204ENST00000485744 CRB1P82279 1406 aa13.71□□□□□ -0.21
HMCN1-204ENST00000485744 DLG5Q8TDM6 1919 aa13.71□□□□□ -0.21
HMCN1-204ENST00000485744 PRKAR2BP31323 418 aa13.71□□□□□ -0.21
HMCN1-204ENST00000485744 UNC5CLQ8IV45 518 aa13.71□□□□□ -0.21
HMCN1-204ENST00000485744 WNK3Q9BYP7 1800 aa13.71□□□□□ -0.22
HMCN1-204ENST00000485744 YTHDC1Q96MU7 727 aaKnown RBP13.7□□□□□ -0.22
HMCN1-204ENST00000485744 KDRP35968 1356 aa13.7□□□□□ -0.22
HMCN1-204ENST00000485744 NCAPD2Q15021 1401 aa13.7□□□□□ -0.22
HMCN1-204ENST00000485744 PHACTR3Q96KR7 559 aa13.7□□□□□ -0.22
HMCN1-204ENST00000485744 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
HMCN1-204ENST00000485744 CCDC9Q9Y3X0 531 aaKnown RBP13.7□□□□□ -0.22
HMCN1-204ENST00000485744 MEGF6O75095 1541 aa13.69□□□□□ -0.22
HMCN1-204ENST00000485744 FCHSD2O94868 740 aa13.68□□□□□ -0.22
HMCN1-204ENST00000485744 CARD10Q9BWT7 1032 aa13.68□□□□□ -0.22
HMCN1-204ENST00000485744 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
HMCN1-204ENST00000485744 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
HMCN1-204ENST00000485744 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
HMCN1-204ENST00000485744 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
HMCN1-204ENST00000485744 SALL2Q9Y467 1007 aaPredicted RBP13.67□□□□□ -0.22
HMCN1-204ENST00000485744 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
HMCN1-204ENST00000485744 PARP4Q9UKK3 1724 aaKnown RBP13.67□□□□□ -0.22
HMCN1-204ENST00000485744 KAT6BQ8WYB5 2073 aa13.66□□□□□ -0.22
HMCN1-204ENST00000485744 GLI3P10071 1580 aa13.66□□□□□ -0.22
HMCN1-204ENST00000485744 APAF1O14727 1248 aa13.66□□□□□ -0.22
HMCN1-204ENST00000485744 SHANK3Q9BYB0 1731 aa13.66□□□□□ -0.22
HMCN1-204ENST00000485744 NEUROD2Q15784 382 aa13.65□□□□□ -0.22
HMCN1-204ENST00000485744 VPS72Q15906 364 aa13.65□□□□□ -0.22
HMCN1-204ENST00000485744 RUNDC1Q96C34 613 aa13.65□□□□□ -0.22
HMCN1-204ENST00000485744 TCP11L2Q8N4U5 519 aa13.65□□□□□ -0.22
HMCN1-204ENST00000485744 RAPGEF4Q8WZA2 1011 aa13.65□□□□□ -0.22
HMCN1-204ENST00000485744 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
HMCN1-204ENST00000485744 ATRNO75882 1429 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms