RNA–Protein interactions for RNA: ENST00000485692.1

GTF3C5-209, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-209ENST00000485692 C11orf95C9JLR9 678 aaPredicted RBP29.58■■■□□ 2.33
GTF3C5-209ENST00000485692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.58■■■□□ 2.33
GTF3C5-209ENST00000485692 USP31Q70CQ4 1352 aa29.57■■■□□ 2.32
GTF3C5-209ENST00000485692 USP54Q70EL1 1684 aa29.56■■■□□ 2.32
GTF3C5-209ENST00000485692 ABCC6O95255 1503 aa29.56■■■□□ 2.32
GTF3C5-209ENST00000485692 PARD3Q8TEW0 1356 aa29.56■■■□□ 2.32
GTF3C5-209ENST00000485692 SLC24A1O60721 1099 aa29.56■■■□□ 2.32
GTF3C5-209ENST00000485692 APBA3O96018 575 aa29.56■■■□□ 2.32
GTF3C5-209ENST00000485692 SLC12A5Q9H2X9 1139 aa29.56■■■□□ 2.32
GTF3C5-209ENST00000485692 TERF2IPQ9NYB0 399 aa29.56■■■□□ 2.32
GTF3C5-209ENST00000485692 EZH2Q15910 746 aaKnown RBP29.55■■■□□ 2.32
GTF3C5-209ENST00000485692 EDC4Q6P2E9 1401 aaKnown RBP29.54■■■□□ 2.32
GTF3C5-209ENST00000485692 CAMKK2Q96RR4 588 aa29.54■■■□□ 2.32
GTF3C5-209ENST00000485692 LRRC37A3O60309 1634 aa29.53■■■□□ 2.32
GTF3C5-209ENST00000485692 PSDA5PKW4 1024 aaPredicted RBP29.53■■■□□ 2.32
GTF3C5-209ENST00000485692 CDCA7Q9BWT1 371 aaPredicted RBP29.53■■■□□ 2.32
GTF3C5-209ENST00000485692 RGPD5Q99666 1765 aa29.53■■■□□ 2.32
GTF3C5-209ENST00000485692 ST20-MTHFSA0A0A6YYL1 179 aa29.52■■■□□ 2.32
GTF3C5-209ENST00000485692 CSB-PGBD3P0DP91 1061 aa29.52■■■□□ 2.32
GTF3C5-209ENST00000485692 DDB1Q16531 1140 aa29.52■■■□□ 2.32
GTF3C5-209ENST00000485692 NME9Q86XW9 330 aa29.52■■■□□ 2.32
GTF3C5-209ENST00000485692 TESK2Q96S53 571 aa29.52■■■□□ 2.32
GTF3C5-209ENST00000485692 OVOS2A0A0G2JMS6 1433 aa29.52■■■□□ 2.32
GTF3C5-209ENST00000485692 OVOS2A0A0J9YW53 1432 aa29.52■■■□□ 2.32
GTF3C5-209ENST00000485692 OVOS2Q6IE36 1432 aa29.52■■■□□ 2.32
GTF3C5-209ENST00000485692 NINLQ9Y2I6 1382 aa29.52■■■□□ 2.32
GTF3C5-209ENST00000485692 WNK3Q9BYP7 1800 aa29.51■■■□□ 2.31
GTF3C5-209ENST00000485692 CARD10Q9BWT7 1032 aa29.51■■■□□ 2.31
GTF3C5-209ENST00000485692 A0A1W2PP64 1363 aa29.51■■■□□ 2.31
GTF3C5-209ENST00000485692 LRP5O75197 1615 aa29.5■■■□□ 2.31
GTF3C5-209ENST00000485692 PEAK1Q9H792 1746 aa29.48■■■□□ 2.31
GTF3C5-209ENST00000485692 R3HDM1Q15032 1099 aaKnown RBP29.46■■■□□ 2.31
GTF3C5-209ENST00000485692 CCDC7Q96M83 1385 aa29.45■■■□□ 2.31
GTF3C5-209ENST00000485692 RREB1Q92766 1687 aa29.44■■■□□ 2.3
GTF3C5-209ENST00000485692 LTN1O94822 1766 aa29.44■■■□□ 2.3
GTF3C5-209ENST00000485692 ERBB3P21860 1342 aa29.41■■■□□ 2.3
GTF3C5-209ENST00000485692 USP47Q96K76 1375 aa29.4■■■□□ 2.3
GTF3C5-209ENST00000485692 BCL9O00512 1426 aa29.4■■■□□ 2.3
GTF3C5-209ENST00000485692 SBF2Q86WG5 1849 aa29.4■■■□□ 2.3
GTF3C5-209ENST00000485692 NUP188Q5SRE5 1749 aa29.4■■■□□ 2.3
GTF3C5-209ENST00000485692 MARCH10Q8NA82 808 aaPredicted RBP29.39■■■□□ 2.3
GTF3C5-209ENST00000485692 EXOC5O00471 708 aa29.38■■■□□ 2.29
GTF3C5-209ENST00000485692 TMF1P82094 1093 aa29.37■■■□□ 2.29
GTF3C5-209ENST00000485692 NBPF14Q5TI25 921 aa29.37■■■□□ 2.29
GTF3C5-209ENST00000485692 RGPD3A6NKT7 1758 aaPredicted RBP29.36■■■□□ 2.29
GTF3C5-209ENST00000485692 RGPD4Q7Z3J3 1758 aa29.36■■■□□ 2.29
GTF3C5-209ENST00000485692 BCL11BQ9C0K0 894 aaPredicted RBP29.36■■■□□ 2.29
GTF3C5-209ENST00000485692 NLRP2Q9NX02 1062 aa29.36■■■□□ 2.29
GTF3C5-209ENST00000485692 TIMELESSQ9UNS1 1208 aa29.36■■■□□ 2.29
GTF3C5-209ENST00000485692 ANKRD36BQ8N2N9 1353 aa29.36■■■□□ 2.29
GTF3C5-209ENST00000485692 TNS2Q63HR2 1409 aa29.35■■■□□ 2.29
GTF3C5-209ENST00000485692 PLSCR1O15162 318 aa29.34■■■□□ 2.29
GTF3C5-209ENST00000485692 ANKRD24Q8TF21 1146 aa29.34■■■□□ 2.29
GTF3C5-209ENST00000485692 COG3Q96JB2 828 aa29.34■■■□□ 2.29
GTF3C5-209ENST00000485692 CLSPNQ9HAW4 1339 aa29.33■■■□□ 2.29
GTF3C5-209ENST00000485692 CDCA8Q53HL2 280 aa29.31■■■□□ 2.28
GTF3C5-209ENST00000485692 IP6K1Q92551 441 aa29.3■■■□□ 2.28
GTF3C5-209ENST00000485692 IL2RBP14784 551 aa29.29■■■□□ 2.28
GTF3C5-209ENST00000485692 PTF1AQ7RTS3 328 aa29.27■■■□□ 2.28
GTF3C5-209ENST00000485692 FAM208AQ9UK61 1670 aaKnown RBP29.26■■■□□ 2.27
GTF3C5-209ENST00000485692 PCGF6Q9BYE7 350 aa29.26■■■□□ 2.27
GTF3C5-209ENST00000485692 MAP3K19Q56UN5 1328 aa29.24■■■□□ 2.27
GTF3C5-209ENST00000485692 AMPHP49418 695 aa29.22■■■□□ 2.27
GTF3C5-209ENST00000485692 HOXC9P31274 260 aa29.21■■■□□ 2.27
GTF3C5-209ENST00000485692 LTV1Q96GA3 475 aaPredicted RBP29.21■■■□□ 2.27
GTF3C5-209ENST00000485692 FYB1O15117 783 aa29.2■■■□□ 2.26
GTF3C5-209ENST00000485692 NHSQ6T4R5 1651 aa29.2■■■□□ 2.26
GTF3C5-209ENST00000485692 RTL1A6NKG5 1358 aa29.19■■■□□ 2.26
GTF3C5-209ENST00000485692 GGNBP2Q9H3C7 697 aa29.18■■■□□ 2.26
GTF3C5-209ENST00000485692 KCNQ2O43526 872 aa29.17■■■□□ 2.26
GTF3C5-209ENST00000485692 FBLN1P23142 703 aa29.17■■■□□ 2.26
GTF3C5-209ENST00000485692 PROM2Q8N271 834 aa29.17■■■□□ 2.26
GTF3C5-209ENST00000485692 TXNRD1Q16881 649 aa29.15■■■□□ 2.26
GTF3C5-209ENST00000485692 ANO8Q9HCE9 1232 aaPredicted RBP29.15■■■□□ 2.26
GTF3C5-209ENST00000485692 KIF20BQ96Q89 1820 aa29.15■■■□□ 2.26
GTF3C5-209ENST00000485692 ACSBG1Q96GR2 724 aa29.14■■■□□ 2.26
GTF3C5-209ENST00000485692 MYOM1P52179 1685 aa29.14■■■□□ 2.26
GTF3C5-209ENST00000485692 RRS1Q15050 365 aaKnown RBP29.13■■■□□ 2.25
GTF3C5-209ENST00000485692 SPON1Q9HCB6 807 aa29.13■■■□□ 2.25
GTF3C5-209ENST00000485692 SMG6Q86US8 1419 aaKnown RBP29.1■■■□□ 2.25
GTF3C5-209ENST00000485692 DDX54Q8TDD1 881 aaKnown RBP29.09■■■□□ 2.25
GTF3C5-209ENST00000485692 CARD14Q9BXL6 1004 aa29.08■■■□□ 2.25
GTF3C5-209ENST00000485692 STK32BQ9NY57 414 aa29.08■■■□□ 2.25
GTF3C5-209ENST00000485692 NSD3Q9BZ95 1437 aa29.08■■■□□ 2.25
GTF3C5-209ENST00000485692 BTAF1O14981 1849 aa29.07■■■□□ 2.24
GTF3C5-209ENST00000485692 RGPD2P0DJD1 1756 aa29.07■■■□□ 2.24
GTF3C5-209ENST00000485692 KIF24Q5T7B8 1368 aa29.07■■■□□ 2.24
GTF3C5-209ENST00000485692 CASZ1Q86V15 1759 aa29.07■■■□□ 2.24
GTF3C5-209ENST00000485692 FLT4P35916 1363 aa29.05■■■□□ 2.24
GTF3C5-209ENST00000485692 PPP1R1BQ9UD71 204 aaPredicted RBP29.05■■■□□ 2.24
GTF3C5-209ENST00000485692 INSRP06213 1382 aa29.04■■■□□ 2.24
GTF3C5-209ENST00000485692 SLC15A2Q16348 729 aa29.04■■■□□ 2.24
GTF3C5-209ENST00000485692 MEGF6O75095 1541 aa29.04■■■□□ 2.24
GTF3C5-209ENST00000485692 KAT6BQ8WYB5 2073 aa29.03■■■□□ 2.24
GTF3C5-209ENST00000485692 NBPF6Q5VWK0 638 aa29.03■■■□□ 2.24
GTF3C5-209ENST00000485692 ZCRB1Q8TBF4 217 aaKnown RBP29.03■■■□□ 2.24
GTF3C5-209ENST00000485692 NBPF4Q96M43 638 aa29.03■■■□□ 2.24
GTF3C5-209ENST00000485692 CGNL1Q0VF96 1302 aa29.02■■■□□ 2.24
GTF3C5-209ENST00000485692 CCER1Q8TC90 406 aaPredicted RBP29.02■■■□□ 2.24
GTF3C5-209ENST00000485692 HSP90AB2PQ58FF8 381 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms