RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
CLRN1-206ENST00000485607 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
CLRN1-206ENST00000485607 PNMA3Q9UL41 463 aa11.45□□□□□ -0.58
CLRN1-206ENST00000485607 ADGRB3O60242 1522 aa11.45□□□□□ -0.58
CLRN1-206ENST00000485607 KDM5AP29375 1690 aaKnown RBP11.43□□□□□ -0.58
CLRN1-206ENST00000485607 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
CLRN1-206ENST00000485607 E2F4Q16254 413 aa11.43□□□□□ -0.58
CLRN1-206ENST00000485607 PPARGC1BQ86YN6 1023 aaKnown RBP11.43□□□□□ -0.58
CLRN1-206ENST00000485607 EID1Q9Y6B2 187 aa11.43□□□□□ -0.58
CLRN1-206ENST00000485607 UNC13BO14795 1591 aa11.42□□□□□ -0.58
CLRN1-206ENST00000485607 MED1Q15648 1581 aaPredicted RBP11.42□□□□□ -0.58
CLRN1-206ENST00000485607 SOCS7O14512 581 aa11.42□□□□□ -0.58
CLRN1-206ENST00000485607 TATDN2Q93075 761 aa11.42□□□□□ -0.58
CLRN1-206ENST00000485607 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
CLRN1-206ENST00000485607 TET3O43151 1660 aa11.42□□□□□ -0.58
CLRN1-206ENST00000485607 RPRD2Q5VT52 1461 aaKnown RBP11.41□□□□□ -0.58
CLRN1-206ENST00000485607 TJAP1Q5JTD0 557 aa11.41□□□□□ -0.58
CLRN1-206ENST00000485607 SLC26A8Q96RN1 970 aa11.41□□□□□ -0.58
CLRN1-206ENST00000485607 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
CLRN1-206ENST00000485607 XIRP1Q702N8 1843 aaKnown RBP11.4□□□□□ -0.58
CLRN1-206ENST00000485607 MTRQ99707 1265 aa11.4□□□□□ -0.58
CLRN1-206ENST00000485607 IL21Q9HBE4 155 aa11.4□□□□□ -0.58
CLRN1-206ENST00000485607 FAM198AQ9UFP1 575 aa11.4□□□□□ -0.58
CLRN1-206ENST00000485607 ROCK1Q13464 1354 aa11.4□□□□□ -0.59
CLRN1-206ENST00000485607 ZFYVE9O95405 1425 aa11.39□□□□□ -0.59
CLRN1-206ENST00000485607 ITGAEP38570 1179 aa11.39□□□□□ -0.59
CLRN1-206ENST00000485607 SLC52A1Q9NWF4 448 aa11.39□□□□□ -0.59
CLRN1-206ENST00000485607 NUDT18Q6ZVK8 323 aa11.38□□□□□ -0.59
CLRN1-206ENST00000485607 TMEM94Q12767 1356 aa11.38□□□□□ -0.59
CLRN1-206ENST00000485607 TMEM131LA2VDJ0 1609 aa11.38□□□□□ -0.59
CLRN1-206ENST00000485607 E9PCH4 1651 aa11.37□□□□□ -0.59
CLRN1-206ENST00000485607 GCC2Q8IWJ2 1684 aa11.37□□□□□ -0.59
CLRN1-206ENST00000485607 PPP1R18Q6NYC8 613 aa11.37□□□□□ -0.59
CLRN1-206ENST00000485607 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
CLRN1-206ENST00000485607 IQGAP3Q86VI3 1631 aa11.37□□□□□ -0.59
CLRN1-206ENST00000485607 NWD1Q149M9 1564 aa11.37□□□□□ -0.59
CLRN1-206ENST00000485607 RIMS2Q9UQ26 1411 aa11.36□□□□□ -0.59
CLRN1-206ENST00000485607 C3orf80F5H4A9 247 aa11.36□□□□□ -0.59
CLRN1-206ENST00000485607 KCNA6P17658 529 aa11.36□□□□□ -0.59
CLRN1-206ENST00000485607 PRIM1P49642 420 aaKnown RBP11.36□□□□□ -0.59
CLRN1-206ENST00000485607 MYO5BQ9ULV0 1848 aa11.35□□□□□ -0.59
CLRN1-206ENST00000485607 ZNF516Q92618 1163 aa11.35□□□□□ -0.59
CLRN1-206ENST00000485607 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
CLRN1-206ENST00000485607 NUP155O75694 1391 aa11.35□□□□□ -0.59
CLRN1-206ENST00000485607 PLEKHG1Q9ULL1 1385 aa11.35□□□□□ -0.59
CLRN1-206ENST00000485607 NKTRP30414 1462 aaKnown RBP11.34□□□□□ -0.59
CLRN1-206ENST00000485607 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
CLRN1-206ENST00000485607 BCANQ96GW7 911 aa11.34□□□□□ -0.59
CLRN1-206ENST00000485607 CDHR5Q9HBB8 845 aa11.34□□□□□ -0.59
CLRN1-206ENST00000485607 PROSER2Q86WR7 435 aaPredicted RBP11.33□□□□□ -0.6
CLRN1-206ENST00000485607 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.33□□□□□ -0.6
CLRN1-206ENST00000485607 PPP1R15AO75807 674 aaPredicted RBP11.32□□□□□ -0.6
CLRN1-206ENST00000485607 ADAMTS13Q76LX8 1427 aa11.32□□□□□ -0.6
CLRN1-206ENST00000485607 OSBPP22059 807 aa11.31□□□□□ -0.6
CLRN1-206ENST00000485607 APLP1P51693 650 aa11.31□□□□□ -0.6
CLRN1-206ENST00000485607 PAXIP1Q6ZW49 1069 aaPredicted RBP11.31□□□□□ -0.6
CLRN1-206ENST00000485607 FAM135BQ49AJ0 1406 aa11.31□□□□□ -0.6
CLRN1-206ENST00000485607 ROBO1Q9Y6N7 1651 aa11.3□□□□□ -0.6
CLRN1-206ENST00000485607 RRBP1Q9P2E9 1410 aaKnown RBP11.29□□□□□ -0.6
CLRN1-206ENST00000485607 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
CLRN1-206ENST00000485607 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
CLRN1-206ENST00000485607 COPS2P61201 443 aa11.29□□□□□ -0.6
CLRN1-206ENST00000485607 NECTIN2Q92692 538 aa11.29□□□□□ -0.6
CLRN1-206ENST00000485607 V9GY48 417 aaPredicted RBP11.29□□□□□ -0.6
CLRN1-206ENST00000485607 GGCXP38435 758 aa11.28□□□□□ -0.6
CLRN1-206ENST00000485607 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
CLRN1-206ENST00000485607 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
CLRN1-206ENST00000485607 TBX22Q9Y458 520 aa11.28□□□□□ -0.6
CLRN1-206ENST00000485607 ARIH1Q9Y4X5 557 aaPredicted RBP11.28□□□□□ -0.6
CLRN1-206ENST00000485607 CHD2O14647 1828 aaKnown RBP11.28□□□□□ -0.6
CLRN1-206ENST00000485607 MSH6P52701 1360 aa11.28□□□□□ -0.6
CLRN1-206ENST00000485607 NAIPQ13075 1403 aa11.27□□□□□ -0.6
CLRN1-206ENST00000485607 SLF2Q8IX21 1173 aa11.27□□□□□ -0.61
CLRN1-206ENST00000485607 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLRN1-206ENST00000485607 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
CLRN1-206ENST00000485607 RGS17Q9UGC6 210 aaPredicted RBP11.27□□□□□ -0.61
CLRN1-206ENST00000485607 PTPRUQ92729 1446 aa11.26□□□□□ -0.61
CLRN1-206ENST00000485607 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
CLRN1-206ENST00000485607 PADI6Q6TGC4 694 aa11.26□□□□□ -0.61
CLRN1-206ENST00000485607 NRXN3Q9Y4C0 1643 aa11.26□□□□□ -0.61
CLRN1-206ENST00000485607 SPHKAPQ2M3C7 1700 aa11.26□□□□□ -0.61
CLRN1-206ENST00000485607 SLAIN2Q9P270 581 aa11.25□□□□□ -0.61
CLRN1-206ENST00000485607 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
CLRN1-206ENST00000485607 CLTCL1P53675 1640 aa11.24□□□□□ -0.61
CLRN1-206ENST00000485607 LCE2BO14633 110 aa11.24□□□□□ -0.61
CLRN1-206ENST00000485607 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
CLRN1-206ENST00000485607 TRPM2O94759 1503 aa11.24□□□□□ -0.61
CLRN1-206ENST00000485607 SETBP1Q9Y6X0 1596 aa11.23□□□□□ -0.61
CLRN1-206ENST00000485607 NEXMIFQ5QGS0 1516 aa11.22□□□□□ -0.61
CLRN1-206ENST00000485607 C14orf37Q86TY3 774 aa11.22□□□□□ -0.61
CLRN1-206ENST00000485607 XRN1Q8IZH2 1706 aaKnown RBP11.22□□□□□ -0.61
CLRN1-206ENST00000485607 AMOTL2Q9Y2J4 779 aa11.22□□□□□ -0.61
CLRN1-206ENST00000485607 NCOA3Q9Y6Q9 1424 aa11.22□□□□□ -0.61
CLRN1-206ENST00000485607 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.21□□□□□ -0.61
CLRN1-206ENST00000485607 COL16A1Q07092 1604 aaPredicted RBP11.21□□□□□ -0.61
CLRN1-206ENST00000485607 HFM1A2PYH4 1435 aa11.21□□□□□ -0.61
CLRN1-206ENST00000485607 METP08581 1390 aa11.21□□□□□ -0.61
CLRN1-206ENST00000485607 ZNF326Q5BKZ1 582 aaKnown RBP11.21□□□□□ -0.61
CLRN1-206ENST00000485607 PHLPP1O60346 1717 aa11.21□□□□□ -0.62
CLRN1-206ENST00000485607 ZNF787Q6DD87 383 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms