RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 WDR17Q8IZU2 1322 aa19.73■□□□□ 0.75
SMARCD3-211ENST00000485592 KCNH5Q8NCM2 988 aa19.72■□□□□ 0.75
SMARCD3-211ENST00000485592 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
SMARCD3-211ENST00000485592 ZNF692Q9BU19 519 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-211ENST00000485592 CDCA7Q9BWT1 371 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-211ENST00000485592 PLSCR1O15162 318 aa19.71■□□□□ 0.75
SMARCD3-211ENST00000485592 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
SMARCD3-211ENST00000485592 RGPD5Q99666 1765 aa19.7■□□□□ 0.74
SMARCD3-211ENST00000485592 KCNQ2O43526 872 aa19.7■□□□□ 0.74
SMARCD3-211ENST00000485592 TTC21BQ7Z4L5 1316 aa19.7■□□□□ 0.74
SMARCD3-211ENST00000485592 TTC21AQ8NDW8 1320 aa19.7■□□□□ 0.74
SMARCD3-211ENST00000485592 CSB-PGBD3P0DP91 1061 aa19.69■□□□□ 0.74
SMARCD3-211ENST00000485592 BCL11BQ9C0K0 894 aaPredicted RBP19.69■□□□□ 0.74
SMARCD3-211ENST00000485592 AXIN2Q9Y2T1 843 aa19.69■□□□□ 0.74
SMARCD3-211ENST00000485592 SOX12O15370 315 aa19.68■□□□□ 0.74
SMARCD3-211ENST00000485592 ARHGEF25Q86VW2 580 aa19.68■□□□□ 0.74
SMARCD3-211ENST00000485592 DCAF8L1A6NGE4 600 aa19.67■□□□□ 0.74
SMARCD3-211ENST00000485592 NINLQ9Y2I6 1382 aa19.67■□□□□ 0.74
SMARCD3-211ENST00000485592 BCL9O00512 1426 aa19.67■□□□□ 0.74
SMARCD3-211ENST00000485592 ABCC6O95255 1503 aa19.66■□□□□ 0.74
SMARCD3-211ENST00000485592 CARD10Q9BWT7 1032 aa19.66■□□□□ 0.74
SMARCD3-211ENST00000485592 CASZ1Q86V15 1759 aa19.65■□□□□ 0.74
SMARCD3-211ENST00000485592 YY1P25490 414 aa19.65■□□□□ 0.74
SMARCD3-211ENST00000485592 MARCH10Q8NA82 808 aaPredicted RBP19.65■□□□□ 0.74
SMARCD3-211ENST00000485592 KTN1Q86UP2 1357 aaKnown RBP19.65■□□□□ 0.74
SMARCD3-211ENST00000485592 NFAT5O94916 1531 aa19.65■□□□□ 0.74
SMARCD3-211ENST00000485592 MON2Q7Z3U7 1717 aa19.65■□□□□ 0.74
SMARCD3-211ENST00000485592 ANO8Q9HCE9 1232 aaPredicted RBP19.64■□□□□ 0.73
SMARCD3-211ENST00000485592 CCDC7Q96M83 1385 aa19.64■□□□□ 0.73
SMARCD3-211ENST00000485592 SIN3AQ96ST3 1273 aa19.63■□□□□ 0.73
SMARCD3-211ENST00000485592 EXOC5O00471 708 aa19.62■□□□□ 0.73
SMARCD3-211ENST00000485592 NEUROD1Q13562 356 aa19.62■□□□□ 0.73
SMARCD3-211ENST00000485592 PTF1AQ7RTS3 328 aa19.62■□□□□ 0.73
SMARCD3-211ENST00000485592 TNS2Q63HR2 1409 aa19.61■□□□□ 0.73
SMARCD3-211ENST00000485592 USP54Q70EL1 1684 aa19.6■□□□□ 0.73
SMARCD3-211ENST00000485592 STK32BQ9NY57 414 aa19.59■□□□□ 0.73
SMARCD3-211ENST00000485592 SBNO2Q9Y2G9 1366 aa19.58■□□□□ 0.73
SMARCD3-211ENST00000485592 LTN1O94822 1766 aa19.58■□□□□ 0.73
SMARCD3-211ENST00000485592 TXNRD1Q16881 649 aa19.58■□□□□ 0.72
SMARCD3-211ENST00000485592 PROM2Q8N271 834 aa19.58■□□□□ 0.72
SMARCD3-211ENST00000485592 NHSQ6T4R5 1651 aa19.58■□□□□ 0.72
SMARCD3-211ENST00000485592 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.57■□□□□ 0.72
SMARCD3-211ENST00000485592 USP31Q70CQ4 1352 aa19.57■□□□□ 0.72
SMARCD3-211ENST00000485592 MYOM1P52179 1685 aa19.56■□□□□ 0.72
SMARCD3-211ENST00000485592 ZBTB7AO95365 584 aa19.56■□□□□ 0.72
SMARCD3-211ENST00000485592 ERBB3P21860 1342 aa19.55■□□□□ 0.72
SMARCD3-211ENST00000485592 SLC15A2Q16348 729 aa19.54■□□□□ 0.72
SMARCD3-211ENST00000485592 HDGFL2Q7Z4V5 671 aaPredicted RBP19.54■□□□□ 0.72
SMARCD3-211ENST00000485592 PDGFDQ9GZP0 370 aaPredicted RBP19.54■□□□□ 0.72
SMARCD3-211ENST00000485592 NLRP2Q9NX02 1062 aa19.54■□□□□ 0.72
SMARCD3-211ENST00000485592 TMC1Q8TDI8 760 aa19.53■□□□□ 0.72
SMARCD3-211ENST00000485592 CD163L1Q9NR16 1453 aa19.53■□□□□ 0.72
SMARCD3-211ENST00000485592 IL2RBP14784 551 aa19.52■□□□□ 0.72
SMARCD3-211ENST00000485592 NME9Q86XW9 330 aa19.52■□□□□ 0.72
SMARCD3-211ENST00000485592 ACSBG1Q96GR2 724 aa19.52■□□□□ 0.72
SMARCD3-211ENST00000485592 CARD11Q9BXL7 1154 aa19.52■□□□□ 0.72
SMARCD3-211ENST00000485592 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
SMARCD3-211ENST00000485592 EDC4Q6P2E9 1401 aaKnown RBP19.51■□□□□ 0.71
SMARCD3-211ENST00000485592 PTGER2P43116 358 aa19.51■□□□□ 0.71
SMARCD3-211ENST00000485592 BTAF1O14981 1849 aa19.5■□□□□ 0.71
SMARCD3-211ENST00000485592 ANKRD24Q8TF21 1146 aa19.49■□□□□ 0.71
SMARCD3-211ENST00000485592 MTFR1LQ9H019 292 aa19.49■□□□□ 0.71
SMARCD3-211ENST00000485592 PAPPAQ13219 1627 aa19.48■□□□□ 0.71
SMARCD3-211ENST00000485592 TERF2IPQ9NYB0 399 aa19.48■□□□□ 0.71
SMARCD3-211ENST00000485592 FAM208AQ9UK61 1670 aaKnown RBP19.48■□□□□ 0.71
SMARCD3-211ENST00000485592 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
SMARCD3-211ENST00000485592 A0A1W2PP64 1363 aa19.46■□□□□ 0.71
SMARCD3-211ENST00000485592 KAT6BQ8WYB5 2073 aa19.46■□□□□ 0.71
SMARCD3-211ENST00000485592 FHDC1Q9C0D6 1143 aaPredicted RBP19.45■□□□□ 0.7
SMARCD3-211ENST00000485592 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
SMARCD3-211ENST00000485592 SYT17Q9BSW7 474 aa19.44■□□□□ 0.7
SMARCD3-211ENST00000485592 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
SMARCD3-211ENST00000485592 SGIP1Q9BQI5 828 aa19.42■□□□□ 0.7
SMARCD3-211ENST00000485592 IP6K1Q92551 441 aa19.41■□□□□ 0.7
SMARCD3-211ENST00000485592 QSER1Q2KHR3 1735 aa19.4■□□□□ 0.7
SMARCD3-211ENST00000485592 ARXQ96QS3 562 aa19.4■□□□□ 0.7
SMARCD3-211ENST00000485592 CHD4Q14839 1912 aa19.4■□□□□ 0.7
SMARCD3-211ENST00000485592 ZNF827Q17R98 1081 aa19.39■□□□□ 0.69
SMARCD3-211ENST00000485592 DDX54Q8TDD1 881 aaKnown RBP19.39■□□□□ 0.69
SMARCD3-211ENST00000485592 LTV1Q96GA3 475 aaPredicted RBP19.39■□□□□ 0.69
SMARCD3-211ENST00000485592 SLC27A3Q5K4L6 730 aa19.38■□□□□ 0.69
SMARCD3-211ENST00000485592 COG3Q96JB2 828 aa19.38■□□□□ 0.69
SMARCD3-211ENST00000485592 DOT1LQ8TEK3 1739 aa19.37■□□□□ 0.69
SMARCD3-211ENST00000485592 MAP3K5Q99683 1374 aa19.37■□□□□ 0.69
SMARCD3-211ENST00000485592 LRRC4BQ9NT99 713 aa19.37■□□□□ 0.69
SMARCD3-211ENST00000485592 SLC24A1O60721 1099 aa19.36■□□□□ 0.69
SMARCD3-211ENST00000485592 AMPHP49418 695 aa19.36■□□□□ 0.69
SMARCD3-211ENST00000485592 ZNF784Q8NCA9 323 aaPredicted RBP19.36■□□□□ 0.69
SMARCD3-211ENST00000485592 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
SMARCD3-211ENST00000485592 SLC16A10Q8TF71 515 aa19.35■□□□□ 0.69
SMARCD3-211ENST00000485592 ANKRD36BQ8N2N9 1353 aa19.34■□□□□ 0.69
SMARCD3-211ENST00000485592 MAP3K19Q56UN5 1328 aa19.34■□□□□ 0.69
SMARCD3-211ENST00000485592 POLD1P28340 1107 aa19.34■□□□□ 0.69
SMARCD3-211ENST00000485592 HOXC9P31274 260 aa19.34■□□□□ 0.69
SMARCD3-211ENST00000485592 AKT1S1Q96B36 256 aa19.34■□□□□ 0.69
SMARCD3-211ENST00000485592 RGPD2P0DJD1 1756 aa19.34■□□□□ 0.69
SMARCD3-211ENST00000485592 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
SMARCD3-211ENST00000485592 TUBGCP6Q96RT7 1819 aa19.33■□□□□ 0.69
SMARCD3-211ENST00000485592 LY75O60449 1722 aa19.33■□□□□ 0.68
SMARCD3-211ENST00000485592 ST20-MTHFSA0A0A6YYL1 179 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms