RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 USP54Q70EL1 1684 aa22.36■■□□□ 1.17
SIK3-211ENST00000485363 TOM1L2Q6ZVM7 507 aa22.36■■□□□ 1.17
SIK3-211ENST00000485363 EDC4Q6P2E9 1401 aaKnown RBP22.36■■□□□ 1.17
SIK3-211ENST00000485363 TNS1Q9HBL0 1735 aaKnown RBP22.36■■□□□ 1.17
SIK3-211ENST00000485363 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
SIK3-211ENST00000485363 WDR17Q8IZU2 1322 aa22.35■■□□□ 1.17
SIK3-211ENST00000485363 NME9Q86XW9 330 aa22.35■■□□□ 1.17
SIK3-211ENST00000485363 A0A1W2PP64 1363 aa22.35■■□□□ 1.17
SIK3-211ENST00000485363 NINLQ9Y2I6 1382 aa22.35■■□□□ 1.17
SIK3-211ENST00000485363 SRCAPQ6ZRS2 3230 aa22.34■■□□□ 1.17
SIK3-211ENST00000485363 DISP2A7MBM2 1401 aa22.33■■□□□ 1.17
SIK3-211ENST00000485363 TRIM37O94972 964 aa22.33■■□□□ 1.17
SIK3-211ENST00000485363 EN1Q05925 392 aaPredicted RBP22.33■■□□□ 1.17
SIK3-211ENST00000485363 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.17
SIK3-211ENST00000485363 TIMELESSQ9UNS1 1208 aa22.33■■□□□ 1.17
SIK3-211ENST00000485363 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
SIK3-211ENST00000485363 ABCC6O95255 1503 aa22.32■■□□□ 1.16
SIK3-211ENST00000485363 CSB-PGBD3P0DP91 1061 aa22.32■■□□□ 1.16
SIK3-211ENST00000485363 USP47Q96K76 1375 aa22.32■■□□□ 1.16
SIK3-211ENST00000485363 WNK3Q9BYP7 1800 aa22.3■■□□□ 1.16
SIK3-211ENST00000485363 C11orf95C9JLR9 678 aaPredicted RBP22.29■■□□□ 1.16
SIK3-211ENST00000485363 TMF1P82094 1093 aa22.29■■□□□ 1.16
SIK3-211ENST00000485363 LRRC37A3O60309 1634 aa22.28■■□□□ 1.16
SIK3-211ENST00000485363 LTN1O94822 1766 aa22.28■■□□□ 1.16
SIK3-211ENST00000485363 APBA3O96018 575 aa22.28■■□□□ 1.16
SIK3-211ENST00000485363 DDB1Q16531 1140 aa22.28■■□□□ 1.16
SIK3-211ENST00000485363 CDCA7Q9BWT1 371 aaPredicted RBP22.28■■□□□ 1.16
SIK3-211ENST00000485363 CARD10Q9BWT7 1032 aa22.28■■□□□ 1.16
SIK3-211ENST00000485363 OVOS2A0A0J9YW53 1432 aa22.26■■□□□ 1.15
SIK3-211ENST00000485363 OVOS2Q6IE36 1432 aa22.26■■□□□ 1.15
SIK3-211ENST00000485363 EZH2Q15910 746 aaKnown RBP22.26■■□□□ 1.15
SIK3-211ENST00000485363 OVOS2A0A0G2JMS6 1433 aa22.25■■□□□ 1.15
SIK3-211ENST00000485363 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
SIK3-211ENST00000485363 CCDC7Q96M83 1385 aa22.25■■□□□ 1.15
SIK3-211ENST00000485363 CAMKK2Q96RR4 588 aa22.24■■□□□ 1.15
SIK3-211ENST00000485363 ANKRD36BQ8N2N9 1353 aa22.24■■□□□ 1.15
SIK3-211ENST00000485363 PEAK1Q9H792 1746 aa22.23■■□□□ 1.15
SIK3-211ENST00000485363 CDCA8Q53HL2 280 aa22.23■■□□□ 1.15
SIK3-211ENST00000485363 PSDA5PKW4 1024 aaPredicted RBP22.22■■□□□ 1.15
SIK3-211ENST00000485363 ERBB3P21860 1342 aa22.22■■□□□ 1.15
SIK3-211ENST00000485363 COG3Q96JB2 828 aa22.21■■□□□ 1.15
SIK3-211ENST00000485363 SBF2Q86WG5 1849 aa22.2■■□□□ 1.14
SIK3-211ENST00000485363 EXOC5O00471 708 aa22.19■■□□□ 1.14
SIK3-211ENST00000485363 ANKRD24Q8TF21 1146 aa22.19■■□□□ 1.14
SIK3-211ENST00000485363 NLRP2Q9NX02 1062 aa22.19■■□□□ 1.14
SIK3-211ENST00000485363 RREB1Q92766 1687 aa22.18■■□□□ 1.14
SIK3-211ENST00000485363 MARCH10Q8NA82 808 aaPredicted RBP22.18■■□□□ 1.14
SIK3-211ENST00000485363 BCL9O00512 1426 aa22.16■■□□□ 1.14
SIK3-211ENST00000485363 R3HDM1Q15032 1099 aaKnown RBP22.16■■□□□ 1.14
SIK3-211ENST00000485363 IP6K1Q92551 441 aa22.16■■□□□ 1.14
SIK3-211ENST00000485363 LRP5O75197 1615 aa22.15■■□□□ 1.14
SIK3-211ENST00000485363 TNS2Q63HR2 1409 aa22.14■■□□□ 1.14
SIK3-211ENST00000485363 NUP188Q5SRE5 1749 aa22.14■■□□□ 1.14
SIK3-211ENST00000485363 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.13
SIK3-211ENST00000485363 BCL11BQ9C0K0 894 aaPredicted RBP22.14■■□□□ 1.13
SIK3-211ENST00000485363 FAM208AQ9UK61 1670 aaKnown RBP22.14■■□□□ 1.13
SIK3-211ENST00000485363 IL2RBP14784 551 aa22.13■■□□□ 1.13
SIK3-211ENST00000485363 RGPD3A6NKT7 1758 aaPredicted RBP22.12■■□□□ 1.13
SIK3-211ENST00000485363 RGPD4Q7Z3J3 1758 aa22.12■■□□□ 1.13
SIK3-211ENST00000485363 MAP3K19Q56UN5 1328 aa22.12■■□□□ 1.13
SIK3-211ENST00000485363 FYB1O15117 783 aa22.12■■□□□ 1.13
SIK3-211ENST00000485363 NBPF14Q5TI25 921 aa22.12■■□□□ 1.13
SIK3-211ENST00000485363 PLSCR1O15162 318 aa22.11■■□□□ 1.13
SIK3-211ENST00000485363 AMPHP49418 695 aa22.11■■□□□ 1.13
SIK3-211ENST00000485363 GGNBP2Q9H3C7 697 aa22.11■■□□□ 1.13
SIK3-211ENST00000485363 MYOM1P52179 1685 aa22.11■■□□□ 1.13
SIK3-211ENST00000485363 KIF20BQ96Q89 1820 aa22.1■■□□□ 1.13
SIK3-211ENST00000485363 HOXC9P31274 260 aa22.1■■□□□ 1.13
SIK3-211ENST00000485363 LTV1Q96GA3 475 aaPredicted RBP22.1■■□□□ 1.13
SIK3-211ENST00000485363 FBLN1P23142 703 aa22.09■■□□□ 1.13
SIK3-211ENST00000485363 PTF1AQ7RTS3 328 aa22.08■■□□□ 1.13
SIK3-211ENST00000485363 RTL1A6NKG5 1358 aa22.07■■□□□ 1.12
SIK3-211ENST00000485363 RRS1Q15050 365 aaKnown RBP22.05■■□□□ 1.12
SIK3-211ENST00000485363 CARD14Q9BXL6 1004 aa22.05■■□□□ 1.12
SIK3-211ENST00000485363 NSD3Q9BZ95 1437 aa22.04■■□□□ 1.12
SIK3-211ENST00000485363 NHSQ6T4R5 1651 aa22.04■■□□□ 1.12
SIK3-211ENST00000485363 RGPD2P0DJD1 1756 aa22.03■■□□□ 1.12
SIK3-211ENST00000485363 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
SIK3-211ENST00000485363 KAT6BQ8WYB5 2073 aa22.02■■□□□ 1.11
SIK3-211ENST00000485363 SMG6Q86US8 1419 aaKnown RBP22.01■■□□□ 1.11
SIK3-211ENST00000485363 KCNQ2O43526 872 aa22.01■■□□□ 1.11
SIK3-211ENST00000485363 ACSBG1Q96GR2 724 aa22.01■■□□□ 1.11
SIK3-211ENST00000485363 POLR3GLQ9BT43 218 aa22■■□□□ 1.11
SIK3-211ENST00000485363 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
SIK3-211ENST00000485363 HSPA5P11021 654 aaKnown RBP21.99■■□□□ 1.11
SIK3-211ENST00000485363 PROM2Q8N271 834 aa21.99■■□□□ 1.11
SIK3-211ENST00000485363 TXNRD1Q16881 649 aa21.98■■□□□ 1.11
SIK3-211ENST00000485363 DDX54Q8TDD1 881 aaKnown RBP21.98■■□□□ 1.11
SIK3-211ENST00000485363 INSRP06213 1382 aa21.98■■□□□ 1.11
SIK3-211ENST00000485363 FLT4P35916 1363 aa21.98■■□□□ 1.11
SIK3-211ENST00000485363 CGNL1Q0VF96 1302 aa21.97■■□□□ 1.11
SIK3-211ENST00000485363 HSP90AB2PQ58FF8 381 aa21.96■■□□□ 1.11
SIK3-211ENST00000485363 NBPF6Q5VWK0 638 aa21.96■■□□□ 1.11
SIK3-211ENST00000485363 NBPF4Q96M43 638 aa21.96■■□□□ 1.11
SIK3-211ENST00000485363 ANO8Q9HCE9 1232 aaPredicted RBP21.96■■□□□ 1.11
SIK3-211ENST00000485363 BTAF1O14981 1849 aa21.96■■□□□ 1.11
SIK3-211ENST00000485363 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
SIK3-211ENST00000485363 MEGF6O75095 1541 aa21.94■■□□□ 1.1
SIK3-211ENST00000485363 USHBP1Q8N6Y0 703 aa21.93■■□□□ 1.1
SIK3-211ENST00000485363 RAPGEF4Q8WZA2 1011 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms