RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 KIF24Q5T7B8 1368 aa19.44■□□□□ 0.7
LRIF1-202ENST00000485275 EIF4A2Q14240 407 aaKnown RBP19.43■□□□□ 0.7
LRIF1-202ENST00000485275 AMPHP49418 695 aa19.41■□□□□ 0.7
LRIF1-202ENST00000485275 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
LRIF1-202ENST00000485275 U2SURPO15042 1029 aaKnown RBP19.4■□□□□ 0.7
LRIF1-202ENST00000485275 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
LRIF1-202ENST00000485275 RGPD2P0DJD1 1756 aa19.4■□□□□ 0.7
LRIF1-202ENST00000485275 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.7
LRIF1-202ENST00000485275 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.7
LRIF1-202ENST00000485275 KIAA0232Q92628 1395 aa19.39■□□□□ 0.69
LRIF1-202ENST00000485275 LMO7Q8WWI1 1683 aa19.39■□□□□ 0.69
LRIF1-202ENST00000485275 ZBTB7CA1YPR0 619 aa19.39■□□□□ 0.69
LRIF1-202ENST00000485275 CPDO75976 1380 aa19.38■□□□□ 0.69
LRIF1-202ENST00000485275 IP6K1Q92551 441 aa19.38■□□□□ 0.69
LRIF1-202ENST00000485275 LRRC59Q96AG4 307 aaKnown RBP19.38■□□□□ 0.69
LRIF1-202ENST00000485275 AXIN2Q9Y2T1 843 aa19.38■□□□□ 0.69
LRIF1-202ENST00000485275 ABCC6O95255 1503 aa19.37■□□□□ 0.69
LRIF1-202ENST00000485275 NUDCQ9Y266 331 aa19.37■□□□□ 0.69
LRIF1-202ENST00000485275 CAMTA1Q9Y6Y1 1673 aa19.36■□□□□ 0.69
LRIF1-202ENST00000485275 AEBP1Q8IUX7 1158 aa19.35■□□□□ 0.69
LRIF1-202ENST00000485275 PLEKHF1Q96S99 279 aa19.35■□□□□ 0.69
LRIF1-202ENST00000485275 RSPH6AQ9H0K4 717 aa19.35■□□□□ 0.69
LRIF1-202ENST00000485275 HMOX1P09601 288 aa19.34■□□□□ 0.69
LRIF1-202ENST00000485275 CHRNA2Q15822 529 aa19.34■□□□□ 0.69
LRIF1-202ENST00000485275 ZBED9Q6R2W3 1325 aa19.34■□□□□ 0.69
LRIF1-202ENST00000485275 LTV1Q96GA3 475 aaPredicted RBP19.33■□□□□ 0.68
LRIF1-202ENST00000485275 IGSF1Q8N6C5 1336 aa19.33■□□□□ 0.68
LRIF1-202ENST00000485275 EYA1Q99502 592 aa19.32■□□□□ 0.68
LRIF1-202ENST00000485275 KDRP35968 1356 aa19.32■□□□□ 0.68
LRIF1-202ENST00000485275 APAF1O14727 1248 aa19.32■□□□□ 0.68
LRIF1-202ENST00000485275 RUNDC1Q96C34 613 aa19.31■□□□□ 0.68
LRIF1-202ENST00000485275 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
LRIF1-202ENST00000485275 ERBB3P21860 1342 aa19.31■□□□□ 0.68
LRIF1-202ENST00000485275 FAM208AQ9UK61 1670 aaKnown RBP19.3■□□□□ 0.68
LRIF1-202ENST00000485275 PRKAR2BP31323 418 aa19.3■□□□□ 0.68
LRIF1-202ENST00000485275 NCAPD2Q15021 1401 aa19.3■□□□□ 0.68
LRIF1-202ENST00000485275 FCHSD2O94868 740 aa19.29■□□□□ 0.68
LRIF1-202ENST00000485275 SULT6B1Q6IMI4 303 aa19.29■□□□□ 0.68
LRIF1-202ENST00000485275 ANKRD24Q8TF21 1146 aa19.29■□□□□ 0.68
LRIF1-202ENST00000485275 HAP1P54257 671 aaPredicted RBP19.28■□□□□ 0.68
LRIF1-202ENST00000485275 NBPF6Q5VWK0 638 aa19.28■□□□□ 0.68
LRIF1-202ENST00000485275 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
LRIF1-202ENST00000485275 USHBP1Q8N6Y0 703 aa19.28■□□□□ 0.68
LRIF1-202ENST00000485275 PHACTR3Q96KR7 559 aa19.28■□□□□ 0.68
LRIF1-202ENST00000485275 NBPF4Q96M43 638 aa19.28■□□□□ 0.68
LRIF1-202ENST00000485275 PRDM11Q9NQV5 511 aa19.28■□□□□ 0.68
LRIF1-202ENST00000485275 COL5A2P05997 1499 aaPredicted RBP19.27■□□□□ 0.68
LRIF1-202ENST00000485275 RRP7AQ9Y3A4 280 aaKnown RBP19.27■□□□□ 0.68
LRIF1-202ENST00000485275 COL14A1Q05707 1796 aaKnown RBP19.27■□□□□ 0.68
LRIF1-202ENST00000485275 PLCH1Q4KWH8 1693 aa19.27■□□□□ 0.68
LRIF1-202ENST00000485275 ZNF521Q96K83 1311 aa19.26■□□□□ 0.67
LRIF1-202ENST00000485275 DLG5Q8TDM6 1919 aa19.26■□□□□ 0.67
LRIF1-202ENST00000485275 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
LRIF1-202ENST00000485275 HSPA1LP34931 641 aa19.26■□□□□ 0.67
LRIF1-202ENST00000485275 JCADQ9P266 1359 aa19.24■□□□□ 0.67
LRIF1-202ENST00000485275 LRP6O75581 1613 aa19.24■□□□□ 0.67
LRIF1-202ENST00000485275 NRAPQ86VF7 1730 aa19.23■□□□□ 0.67
LRIF1-202ENST00000485275 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
LRIF1-202ENST00000485275 MAPK8IP3Q9UPT6 1336 aa19.22■□□□□ 0.67
LRIF1-202ENST00000485275 TMPOP42166 694 aaKnown RBP19.21■□□□□ 0.67
LRIF1-202ENST00000485275 NEUROD2Q15784 382 aa19.21■□□□□ 0.67
LRIF1-202ENST00000485275 NUTM2BA6NNL0 878 aaPredicted RBP19.19■□□□□ 0.66
LRIF1-202ENST00000485275 NUTM2EB1AL46 878 aaPredicted RBP19.19■□□□□ 0.66
LRIF1-202ENST00000485275 ADAMTS2O95450 1211 aa19.19■□□□□ 0.66
LRIF1-202ENST00000485275 CENPBP07199 599 aaPredicted RBP19.19■□□□□ 0.66
LRIF1-202ENST00000485275 NUTM2AQ8IVF1 878 aaPredicted RBP19.19■□□□□ 0.66
LRIF1-202ENST00000485275 CDCA7LQ96GN5 454 aa19.19■□□□□ 0.66
LRIF1-202ENST00000485275 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
LRIF1-202ENST00000485275 WWC1Q8IX03 1113 aa19.19■□□□□ 0.66
LRIF1-202ENST00000485275 TRIM35Q9UPQ4 493 aa19.19■□□□□ 0.66
LRIF1-202ENST00000485275 MEGF6O75095 1541 aa19.18■□□□□ 0.66
LRIF1-202ENST00000485275 PNNQ9H307 717 aaKnown RBP19.18■□□□□ 0.66
LRIF1-202ENST00000485275 NFE2L2Q16236 605 aa19.17■□□□□ 0.66
LRIF1-202ENST00000485275 SPINK5Q9NQ38 1064 aaPredicted RBP19.17■□□□□ 0.66
LRIF1-202ENST00000485275 BTG4Q9NY30 223 aa19.17■□□□□ 0.66
LRIF1-202ENST00000485275 NLRP2Q9NX02 1062 aa19.16■□□□□ 0.66
LRIF1-202ENST00000485275 NWD2Q9ULI1 1742 aa19.16■□□□□ 0.66
LRIF1-202ENST00000485275 SLIT2O94813 1529 aa19.16■□□□□ 0.66
LRIF1-202ENST00000485275 CSB-PGBD3P0DP91 1061 aa19.16■□□□□ 0.66
LRIF1-202ENST00000485275 CCDC27Q2M243 656 aa19.16■□□□□ 0.66
LRIF1-202ENST00000485275 MTHFSDQ2M296 383 aaKnown RBP19.16■□□□□ 0.66
LRIF1-202ENST00000485275 LARP1Q6PKG0 1096 aaKnown RBP19.16■□□□□ 0.66
LRIF1-202ENST00000485275 RIPK4P57078 832 aa19.15■□□□□ 0.66
LRIF1-202ENST00000485275 STRN4Q9NRL3 753 aa19.15■□□□□ 0.66
LRIF1-202ENST00000485275 PKD1L3Q7Z443 1732 aa19.14■□□□□ 0.65
LRIF1-202ENST00000485275 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
LRIF1-202ENST00000485275 SPATA31A6Q5VVP1 1343 aa19.13■□□□□ 0.65
LRIF1-202ENST00000485275 NGEFQ8N5V2 710 aa19.13■□□□□ 0.65
LRIF1-202ENST00000485275 WNK3Q9BYP7 1800 aa19.12■□□□□ 0.65
LRIF1-202ENST00000485275 PARP4Q9UKK3 1724 aaKnown RBP19.12■□□□□ 0.65
LRIF1-202ENST00000485275 LRRC37A3O60309 1634 aa19.12■□□□□ 0.65
LRIF1-202ENST00000485275 CRB1P82279 1406 aa19.12■□□□□ 0.65
LRIF1-202ENST00000485275 SHANK3Q9BYB0 1731 aa19.12■□□□□ 0.65
LRIF1-202ENST00000485275 NEFMP07197 916 aa19.11■□□□□ 0.65
LRIF1-202ENST00000485275 TOM1L2Q6ZVM7 507 aa19.11■□□□□ 0.65
LRIF1-202ENST00000485275 THUMPD2Q9BTF0 503 aaKnown RBP19.11■□□□□ 0.65
LRIF1-202ENST00000485275 GOLGA2Q08379 1002 aa19.1■□□□□ 0.65
LRIF1-202ENST00000485275 PDE3BQ13370 1112 aa19.1■□□□□ 0.65
LRIF1-202ENST00000485275 VIRMAQ69YN4 1812 aaKnown RBP19.09■□□□□ 0.65
LRIF1-202ENST00000485275 DCTN1Q14203 1278 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms