RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 LRRC59Q96AG4 307 aaKnown RBP23.22■■□□□ 1.31
CCDC78-214ENST00000485091 LTN1O94822 1766 aa23.22■■□□□ 1.31
CCDC78-214ENST00000485091 BLMP54132 1417 aaPredicted RBP23.22■■□□□ 1.31
CCDC78-214ENST00000485091 HAP1P54257 671 aaPredicted RBP23.22■■□□□ 1.31
CCDC78-214ENST00000485091 PHRF1Q9P1Y6 1649 aaKnown RBP23.21■■□□□ 1.31
CCDC78-214ENST00000485091 ARHGEF25Q86VW2 580 aa23.21■■□□□ 1.31
CCDC78-214ENST00000485091 LTV1Q96GA3 475 aaPredicted RBP23.21■■□□□ 1.31
CCDC78-214ENST00000485091 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
CCDC78-214ENST00000485091 IP6K1Q92551 441 aa23.19■■□□□ 1.3
CCDC78-214ENST00000485091 KIF24Q5T7B8 1368 aa23.18■■□□□ 1.3
CCDC78-214ENST00000485091 HMOX1P09601 288 aa23.18■■□□□ 1.3
CCDC78-214ENST00000485091 CENPBP07199 599 aaPredicted RBP23.17■■□□□ 1.3
CCDC78-214ENST00000485091 RTL1A6NKG5 1358 aa23.17■■□□□ 1.3
CCDC78-214ENST00000485091 CRYBG1Q9Y4K1 1723 aa23.16■■□□□ 1.3
CCDC78-214ENST00000485091 CHRNA2Q15822 529 aa23.15■■□□□ 1.3
CCDC78-214ENST00000485091 RUNDC1Q96C34 613 aa23.15■■□□□ 1.3
CCDC78-214ENST00000485091 APAF1O14727 1248 aa23.14■■□□□ 1.3
CCDC78-214ENST00000485091 KIAA0232Q92628 1395 aa23.14■■□□□ 1.29
CCDC78-214ENST00000485091 AXIN2Q9Y2T1 843 aa23.13■■□□□ 1.29
CCDC78-214ENST00000485091 ZBED9Q6R2W3 1325 aa23.13■■□□□ 1.29
CCDC78-214ENST00000485091 COL16A1Q07092 1604 aaPredicted RBP23.12■■□□□ 1.29
CCDC78-214ENST00000485091 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
CCDC78-214ENST00000485091 FCHSD2O94868 740 aa23.11■■□□□ 1.29
CCDC78-214ENST00000485091 PRKAR2BP31323 418 aa23.11■■□□□ 1.29
CCDC78-214ENST00000485091 EYA1Q99502 592 aa23.11■■□□□ 1.29
CCDC78-214ENST00000485091 RSPH6AQ9H0K4 717 aa23.11■■□□□ 1.29
CCDC78-214ENST00000485091 AEBP1Q8IUX7 1158 aa23.11■■□□□ 1.29
CCDC78-214ENST00000485091 PLEKHF1Q96S99 279 aa23.11■■□□□ 1.29
CCDC78-214ENST00000485091 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
CCDC78-214ENST00000485091 NEUROD2Q15784 382 aa23.1■■□□□ 1.29
CCDC78-214ENST00000485091 ANKRD24Q8TF21 1146 aa23.1■■□□□ 1.29
CCDC78-214ENST00000485091 PNNQ9H307 717 aaKnown RBP23.1■■□□□ 1.29
CCDC78-214ENST00000485091 PRDM11Q9NQV5 511 aa23.1■■□□□ 1.29
CCDC78-214ENST00000485091 RRP7AQ9Y3A4 280 aaKnown RBP23.1■■□□□ 1.29
CCDC78-214ENST00000485091 MAPK8IP3Q9UPT6 1336 aa23.09■■□□□ 1.29
CCDC78-214ENST00000485091 TCP11L2Q8N4U5 519 aa23.09■■□□□ 1.29
CCDC78-214ENST00000485091 CPDO75976 1380 aa23.08■■□□□ 1.28
CCDC78-214ENST00000485091 RGPD5Q99666 1765 aa23.07■■□□□ 1.28
CCDC78-214ENST00000485091 NEFMP07197 916 aa23.07■■□□□ 1.28
CCDC78-214ENST00000485091 USHBP1Q8N6Y0 703 aa23.07■■□□□ 1.28
CCDC78-214ENST00000485091 RGPD1P0DJD0 1748 aa23.06■■□□□ 1.28
CCDC78-214ENST00000485091 IGSF1Q8N6C5 1336 aa23.05■■□□□ 1.28
CCDC78-214ENST00000485091 NBPF6Q5VWK0 638 aa23.05■■□□□ 1.28
CCDC78-214ENST00000485091 PHACTR3Q96KR7 559 aa23.05■■□□□ 1.28
CCDC78-214ENST00000485091 NBPF4Q96M43 638 aa23.05■■□□□ 1.28
CCDC78-214ENST00000485091 COL22A1Q8NFW1 1626 aaPredicted RBP23.04■■□□□ 1.28
CCDC78-214ENST00000485091 NUTM2BA6NNL0 878 aaPredicted RBP23.04■■□□□ 1.28
CCDC78-214ENST00000485091 NUTM2EB1AL46 878 aaPredicted RBP23.04■■□□□ 1.28
CCDC78-214ENST00000485091 NUTM2AQ8IVF1 878 aaPredicted RBP23.04■■□□□ 1.28
CCDC78-214ENST00000485091 COL18A1P39060 1754 aa23.04■■□□□ 1.28
CCDC78-214ENST00000485091 CSB-PGBD3P0DP91 1061 aa23.03■■□□□ 1.28
CCDC78-214ENST00000485091 FAM83GA6ND36 823 aa23.02■■□□□ 1.28
CCDC78-214ENST00000485091 ERBB3P21860 1342 aa23.02■■□□□ 1.28
CCDC78-214ENST00000485091 RGPD2P0DJD1 1756 aa23.01■■□□□ 1.27
CCDC78-214ENST00000485091 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
CCDC78-214ENST00000485091 ADAMTS2O95450 1211 aa23■■□□□ 1.27
CCDC78-214ENST00000485091 NLRP2Q9NX02 1062 aa22.99■■□□□ 1.27
CCDC78-214ENST00000485091 RIPK4P57078 832 aa22.98■■□□□ 1.27
CCDC78-214ENST00000485091 CAMTA1Q9Y6Y1 1673 aa22.98■■□□□ 1.27
CCDC78-214ENST00000485091 ABCC6O95255 1503 aa22.98■■□□□ 1.27
CCDC78-214ENST00000485091 KDRP35968 1356 aa22.97■■□□□ 1.27
CCDC78-214ENST00000485091 STRN4Q9NRL3 753 aa22.97■■□□□ 1.27
CCDC78-214ENST00000485091 JCADQ9P266 1359 aa22.97■■□□□ 1.27
CCDC78-214ENST00000485091 CDCA7LQ96GN5 454 aa22.96■■□□□ 1.27
CCDC78-214ENST00000485091 EVA1CP58658 441 aa22.96■■□□□ 1.27
CCDC78-214ENST00000485091 NFE2L2Q16236 605 aa22.96■■□□□ 1.27
CCDC78-214ENST00000485091 WWC1Q8IX03 1113 aa22.96■■□□□ 1.27
CCDC78-214ENST00000485091 LMO7Q8WWI1 1683 aa22.96■■□□□ 1.27
CCDC78-214ENST00000485091 NGEFQ8N5V2 710 aa22.95■■□□□ 1.26
CCDC78-214ENST00000485091 BTG4Q9NY30 223 aa22.95■■□□□ 1.26
CCDC78-214ENST00000485091 ZNF521Q96K83 1311 aa22.94■■□□□ 1.26
CCDC78-214ENST00000485091 COL5A2P05997 1499 aaPredicted RBP22.93■■□□□ 1.26
CCDC78-214ENST00000485091 TOM1L2Q6ZVM7 507 aa22.93■■□□□ 1.26
CCDC78-214ENST00000485091 GOLGA2Q08379 1002 aa22.92■■□□□ 1.26
CCDC78-214ENST00000485091 MTHFSDQ2M296 383 aaKnown RBP22.92■■□□□ 1.26
CCDC78-214ENST00000485091 TRIM35Q9UPQ4 493 aa22.92■■□□□ 1.26
CCDC78-214ENST00000485091 WDR17Q8IZU2 1322 aa22.92■■□□□ 1.26
CCDC78-214ENST00000485091 PDE3BQ13370 1112 aa22.91■■□□□ 1.26
CCDC78-214ENST00000485091 CCDC27Q2M243 656 aa22.91■■□□□ 1.26
CCDC78-214ENST00000485091 COL14A1Q05707 1796 aaKnown RBP22.91■■□□□ 1.26
CCDC78-214ENST00000485091 LARP1Q6PKG0 1096 aaKnown RBP22.9■■□□□ 1.26
CCDC78-214ENST00000485091 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
CCDC78-214ENST00000485091 SPINK5Q9NQ38 1064 aaPredicted RBP22.88■■□□□ 1.25
CCDC78-214ENST00000485091 NCAPD2Q15021 1401 aa22.88■■□□□ 1.25
CCDC78-214ENST00000485091 FAM208AQ9UK61 1670 aaKnown RBP22.88■■□□□ 1.25
CCDC78-214ENST00000485091 NCBP3Q53F19 620 aaKnown RBP22.88■■□□□ 1.25
CCDC78-214ENST00000485091 GAS2L2Q8NHY3 880 aa22.87■■□□□ 1.25
CCDC78-214ENST00000485091 RAPGEF4Q8WZA2 1011 aa22.87■■□□□ 1.25
CCDC78-214ENST00000485091 DCTN1Q14203 1278 aa22.86■■□□□ 1.25
CCDC78-214ENST00000485091 THUMPD2Q9BTF0 503 aaKnown RBP22.86■■□□□ 1.25
CCDC78-214ENST00000485091 USP35Q9P2H5 1018 aa22.86■■□□□ 1.25
CCDC78-214ENST00000485091 SPATA31A6Q5VVP1 1343 aa22.86■■□□□ 1.25
CCDC78-214ENST00000485091 WDR63Q8IWG1 891 aa22.85■■□□□ 1.25
CCDC78-214ENST00000485091 DLG5Q8TDM6 1919 aa22.85■■□□□ 1.25
CCDC78-214ENST00000485091 TATP17735 454 aaPredicted RBP22.85■■□□□ 1.25
CCDC78-214ENST00000485091 SLFN5Q08AF3 891 aa22.85■■□□□ 1.25
CCDC78-214ENST00000485091 C8orf37Q96NL8 207 aa22.85■■□□□ 1.25
CCDC78-214ENST00000485091 LMOD3Q0VAK6 560 aa22.84■■□□□ 1.25
CCDC78-214ENST00000485091 PLEKHO1Q53GL0 409 aaPredicted RBP22.84■■□□□ 1.25
CCDC78-214ENST00000485091 CARD10Q9BWT7 1032 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms