RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CCDC9Q9Y3X0 531 aaKnown RBP10.84□□□□□ -0.67
MACF1-220ENST00000485063 ANKRD36BQ8N2N9 1353 aa10.84□□□□□ -0.67
MACF1-220ENST00000485063 CD163L1Q9NR16 1453 aa10.84□□□□□ -0.67
MACF1-220ENST00000485063 USP19O94966 1318 aa10.84□□□□□ -0.67
MACF1-220ENST00000485063 BCL9LQ86UU0 1499 aa10.83□□□□□ -0.68
MACF1-220ENST00000485063 KIAA0232Q92628 1395 aa10.83□□□□□ -0.68
MACF1-220ENST00000485063 FAM83GA6ND36 823 aa10.83□□□□□ -0.68
MACF1-220ENST00000485063 BTG4Q9NY30 223 aa10.83□□□□□ -0.68
MACF1-220ENST00000485063 ZBTB7CA1YPR0 619 aa10.82□□□□□ -0.68
MACF1-220ENST00000485063 SLIT3O75094 1523 aa10.82□□□□□ -0.68
MACF1-220ENST00000485063 ATRNO75882 1429 aa10.82□□□□□ -0.68
MACF1-220ENST00000485063 MYOM1P52179 1685 aa10.82□□□□□ -0.68
MACF1-220ENST00000485063 CDK12Q9NYV4 1490 aaPredicted RBP10.81□□□□□ -0.68
MACF1-220ENST00000485063 CPDO75976 1380 aa10.81□□□□□ -0.68
MACF1-220ENST00000485063 SOCS7O14512 581 aa10.81□□□□□ -0.68
MACF1-220ENST00000485063 EVA1CP58658 441 aa10.81□□□□□ -0.68
MACF1-220ENST00000485063 CHRNA2Q15822 529 aa10.81□□□□□ -0.68
MACF1-220ENST00000485063 GJD4Q96KN9 370 aaPredicted RBP10.81□□□□□ -0.68
MACF1-220ENST00000485063 CLEC11AQ9Y240 323 aa10.81□□□□□ -0.68
MACF1-220ENST00000485063 USP54Q70EL1 1684 aa10.81□□□□□ -0.68
MACF1-220ENST00000485063 NRAPQ86VF7 1730 aa10.81□□□□□ -0.68
MACF1-220ENST00000485063 USP31Q70CQ4 1352 aa10.8□□□□□ -0.68
MACF1-220ENST00000485063 KIF20BQ96Q89 1820 aa10.8□□□□□ -0.68
MACF1-220ENST00000485063 SOX12O15370 315 aa10.8□□□□□ -0.68
MACF1-220ENST00000485063 PRKAR2AP13861 404 aaKnown RBP10.8□□□□□ -0.68
MACF1-220ENST00000485063 VPS72Q15906 364 aa10.8□□□□□ -0.68
MACF1-220ENST00000485063 NME9Q86XW9 330 aa10.8□□□□□ -0.68
MACF1-220ENST00000485063 COG3Q96JB2 828 aa10.8□□□□□ -0.68
MACF1-220ENST00000485063 LHX8Q68G74 356 aa10.79□□□□□ -0.68
MACF1-220ENST00000485063 STRN4Q9NRL3 753 aa10.79□□□□□ -0.68
MACF1-220ENST00000485063 LTN1O94822 1766 aa10.78□□□□□ -0.68
MACF1-220ENST00000485063 LMO7Q8WWI1 1683 aa10.77□□□□□ -0.69
MACF1-220ENST00000485063 A0A0G2JS52 829 aa10.77□□□□□ -0.69
MACF1-220ENST00000485063 MYT1Q01538 1121 aa10.77□□□□□ -0.69
MACF1-220ENST00000485063 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.69
MACF1-220ENST00000485063 GLI3P10071 1580 aa10.77□□□□□ -0.69
MACF1-220ENST00000485063 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.69
MACF1-220ENST00000485063 RGS12O14924 1447 aa10.76□□□□□ -0.69
MACF1-220ENST00000485063 NSD3Q9BZ95 1437 aa10.76□□□□□ -0.69
MACF1-220ENST00000485063 RGPD5Q99666 1765 aa10.76□□□□□ -0.69
MACF1-220ENST00000485063 ARHGEF25Q86VW2 580 aa10.76□□□□□ -0.69
MACF1-220ENST00000485063 CGNL1Q0VF96 1302 aa10.76□□□□□ -0.69
MACF1-220ENST00000485063 CAMTA1Q9Y6Y1 1673 aa10.76□□□□□ -0.69
MACF1-220ENST00000485063 OVOS2A0A0J9YW53 1432 aa10.75□□□□□ -0.69
MACF1-220ENST00000485063 OVOS2Q6IE36 1432 aa10.75□□□□□ -0.69
MACF1-220ENST00000485063 NFAT5O94916 1531 aa10.75□□□□□ -0.69
MACF1-220ENST00000485063 FYB1O15117 783 aa10.75□□□□□ -0.69
MACF1-220ENST00000485063 GGNBP2Q9H3C7 697 aa10.75□□□□□ -0.69
MACF1-220ENST00000485063 SPATA31A5Q5VU36 1347 aa10.75□□□□□ -0.69
MACF1-220ENST00000485063 SPATA31A7Q8IWB4 1347 aa10.75□□□□□ -0.69
MACF1-220ENST00000485063 COL18A1P39060 1754 aa10.75□□□□□ -0.69
MACF1-220ENST00000485063 COL5A2P05997 1499 aaPredicted RBP10.74□□□□□ -0.69
MACF1-220ENST00000485063 ABCC6O95255 1503 aa10.74□□□□□ -0.69
MACF1-220ENST00000485063 CSB-PGBD3P0DP91 1061 aa10.74□□□□□ -0.69
MACF1-220ENST00000485063 ZEB1P37275 1124 aaPredicted RBP10.74□□□□□ -0.69
MACF1-220ENST00000485063 PANK3Q9H999 370 aa10.74□□□□□ -0.69
MACF1-220ENST00000485063 USP35Q9P2H5 1018 aa10.74□□□□□ -0.69
MACF1-220ENST00000485063 C11orf95C9JLR9 678 aaPredicted RBP10.73□□□□□ -0.69
MACF1-220ENST00000485063 FAM98CQ17RN3 349 aaKnown RBP10.73□□□□□ -0.69
MACF1-220ENST00000485063 TOM1L2Q6ZVM7 507 aa10.73□□□□□ -0.69
MACF1-220ENST00000485063 SEPT12Q8IYM1 358 aa10.73□□□□□ -0.69
MACF1-220ENST00000485063 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
MACF1-220ENST00000485063 THRAP3Q9Y2W1 955 aaKnown RBP10.73□□□□□ -0.69
MACF1-220ENST00000485063 KIF7Q2M1P5 1343 aa10.73□□□□□ -0.69
MACF1-220ENST00000485063 SPATA31A1Q5TZJ5 1347 aa10.73□□□□□ -0.69
MACF1-220ENST00000485063 CRB1P82279 1406 aa10.73□□□□□ -0.69
MACF1-220ENST00000485063 ANKRD26Q9UPS8 1709 aa10.72□□□□□ -0.69
MACF1-220ENST00000485063 BRWD3Q6RI45 1802 aa10.72□□□□□ -0.69
MACF1-220ENST00000485063 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
MACF1-220ENST00000485063 AMPHP49418 695 aa10.72□□□□□ -0.69
MACF1-220ENST00000485063 LARP1Q6PKG0 1096 aaKnown RBP10.72□□□□□ -0.69
MACF1-220ENST00000485063 KNSTRNQ9Y448 316 aa10.72□□□□□ -0.69
MACF1-220ENST00000485063 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
MACF1-220ENST00000485063 BLMP54132 1417 aaPredicted RBP10.71□□□□□ -0.69
MACF1-220ENST00000485063 WDR17Q8IZU2 1322 aa10.71□□□□□ -0.69
MACF1-220ENST00000485063 TCP11L2Q8N4U5 519 aa10.71□□□□□ -0.69
MACF1-220ENST00000485063 AXIN2Q9Y2T1 843 aa10.71□□□□□ -0.69
MACF1-220ENST00000485063 FAM208AQ9UK61 1670 aaKnown RBP10.7□□□□□ -0.7
MACF1-220ENST00000485063 NSD2O96028 1365 aa10.7□□□□□ -0.7
MACF1-220ENST00000485063 CCDC7Q96M83 1385 aa10.7□□□□□ -0.7
MACF1-220ENST00000485063 BARGINQ6ZT62 677 aa10.7□□□□□ -0.7
MACF1-220ENST00000485063 KRT27Q7Z3Y8 459 aa10.7□□□□□ -0.7
MACF1-220ENST00000485063 IP6K1Q92551 441 aa10.7□□□□□ -0.7
MACF1-220ENST00000485063 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
MACF1-220ENST00000485063 RTL1A6NKG5 1358 aa10.69□□□□□ -0.7
MACF1-220ENST00000485063 MAP3K19Q56UN5 1328 aa10.69□□□□□ -0.7
MACF1-220ENST00000485063 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
MACF1-220ENST00000485063 THSD7AQ9UPZ6 1657 aa10.69□□□□□ -0.7
MACF1-220ENST00000485063 SMG6Q86US8 1419 aaKnown RBP10.68□□□□□ -0.7
MACF1-220ENST00000485063 ERBB3P21860 1342 aa10.68□□□□□ -0.7
MACF1-220ENST00000485063 HOXC9P31274 260 aa10.68□□□□□ -0.7
MACF1-220ENST00000485063 PDE3BQ13370 1112 aa10.68□□□□□ -0.7
MACF1-220ENST00000485063 RRS1Q15050 365 aaKnown RBP10.68□□□□□ -0.7
MACF1-220ENST00000485063 CDCA7Q9BWT1 371 aaPredicted RBP10.68□□□□□ -0.7
MACF1-220ENST00000485063 CARD10Q9BWT7 1032 aa10.68□□□□□ -0.7
MACF1-220ENST00000485063 NLRP2Q9NX02 1062 aa10.68□□□□□ -0.7
MACF1-220ENST00000485063 WNK3Q9BYP7 1800 aa10.68□□□□□ -0.7
MACF1-220ENST00000485063 PARP4Q9UKK3 1724 aaKnown RBP10.67□□□□□ -0.7
MACF1-220ENST00000485063 KIF24Q5T7B8 1368 aa10.67□□□□□ -0.7
MACF1-220ENST00000485063 WASHC2AQ641Q2 1341 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms