RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ADAM32Q8TC27 787 aa9.46□□□□□ -0.9
SMC4-215ENST00000484799 EPS8L1Q8TE68 723 aa9.46□□□□□ -0.9
SMC4-215ENST00000484799 ITPKCQ96DU7 683 aa9.46□□□□□ -0.9
SMC4-215ENST00000484799 KCTD15Q96SI1 283 aaPredicted RBP9.46□□□□□ -0.9
SMC4-215ENST00000484799 HMX1Q9NP08 348 aaPredicted RBP9.46□□□□□ -0.9
SMC4-215ENST00000484799 BMP2P12643 396 aa9.45□□□□□ -0.9
SMC4-215ENST00000484799 NBPF20Q3BBV1 942 aa9.45□□□□□ -0.9
SMC4-215ENST00000484799 BANK1Q8NDB2 785 aa9.45□□□□□ -0.9
SMC4-215ENST00000484799 ZFP42Q96MM3 310 aa9.45□□□□□ -0.9
SMC4-215ENST00000484799 PURBQ96QR8 312 aaKnown RBP9.45□□□□□ -0.9
SMC4-215ENST00000484799 NR3C2P08235 984 aa9.44□□□□□ -0.9
SMC4-215ENST00000484799 C6orf118Q5T5N4 469 aa9.44□□□□□ -0.9
SMC4-215ENST00000484799 TRIM46Q7Z4K8 759 aa9.44□□□□□ -0.9
SMC4-215ENST00000484799 SLC16A10Q8TF71 515 aa9.44□□□□□ -0.9
SMC4-215ENST00000484799 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
SMC4-215ENST00000484799 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
SMC4-215ENST00000484799 RAB15P59190 212 aa9.43□□□□□ -0.9
SMC4-215ENST00000484799 ZNF592Q92610 1267 aa9.42□□□□□ -0.9
SMC4-215ENST00000484799 WFS1O76024 890 aa9.41□□□□□ -0.9
SMC4-215ENST00000484799 PPP1R26Q5T8A7 1209 aaPredicted RBP9.41□□□□□ -0.9
SMC4-215ENST00000484799 TREML4Q6UXN2 200 aa9.41□□□□□ -0.9
SMC4-215ENST00000484799 TSEN34Q9BSV6 310 aaKnown RBP9.41□□□□□ -0.9
SMC4-215ENST00000484799 KLF16Q9BXK1 252 aaPredicted RBP9.41□□□□□ -0.9
SMC4-215ENST00000484799 ESF1Q9H501 851 aaKnown RBP9.41□□□□□ -0.9
SMC4-215ENST00000484799 ZBBXA8MT70 800 aa9.4□□□□□ -0.9
SMC4-215ENST00000484799 MAN1A2O60476 641 aa9.4□□□□□ -0.9
SMC4-215ENST00000484799 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
SMC4-215ENST00000484799 TERTO14746 1132 aaKnown RBP9.38□□□□□ -0.91
SMC4-215ENST00000484799 TRIM34Q9BYJ4 488 aa9.38□□□□□ -0.91
SMC4-215ENST00000484799 NDUFB9Q9Y6M9 179 aa9.38□□□□□ -0.91
SMC4-215ENST00000484799 MCCD1P59942 119 aaPredicted RBP9.37□□□□□ -0.91
SMC4-215ENST00000484799 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
SMC4-215ENST00000484799 NXF1Q9UBU9 619 aaKnown RBP9.37□□□□□ -0.91
SMC4-215ENST00000484799 INTS6LQ5JSJ4 861 aaKnown RBP9.36□□□□□ -0.91
SMC4-215ENST00000484799 RNF20Q5VTR2 975 aa9.35□□□□□ -0.91
SMC4-215ENST00000484799 MEIOBQ8N635 442 aa9.35□□□□□ -0.91
SMC4-215ENST00000484799 GJD4Q96KN9 370 aaPredicted RBP9.34□□□□□ -0.91
SMC4-215ENST00000484799 OCSTAMPQ9BR26 566 aa9.34□□□□□ -0.91
SMC4-215ENST00000484799 SNRKQ9NRH2 765 aa9.34□□□□□ -0.91
SMC4-215ENST00000484799 NR1H3Q13133 447 aa9.33□□□□□ -0.92
SMC4-215ENST00000484799 CBLBQ13191 982 aa9.33□□□□□ -0.92
SMC4-215ENST00000484799 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
SMC4-215ENST00000484799 SEPT12Q8IYM1 358 aa9.33□□□□□ -0.92
SMC4-215ENST00000484799 FBXO45P0C2W1 286 aa9.32□□□□□ -0.92
SMC4-215ENST00000484799 RELBQ01201 579 aa9.32□□□□□ -0.92
SMC4-215ENST00000484799 TTLL8A6PVC2 850 aa9.31□□□□□ -0.92
SMC4-215ENST00000484799 ERVH48-1M5A8F1 160 aa9.31□□□□□ -0.92
SMC4-215ENST00000484799 SOCS7O14512 581 aa9.31□□□□□ -0.92
SMC4-215ENST00000484799 NPAS3Q8IXF0 933 aa9.31□□□□□ -0.92
SMC4-215ENST00000484799 TMPRSS4Q9NRS4 437 aa9.31□□□□□ -0.92
SMC4-215ENST00000484799 SOBPA7XYQ1 873 aa9.3□□□□□ -0.92
SMC4-215ENST00000484799 GIGYF1O75420 1035 aaPredicted RBP9.3□□□□□ -0.92
SMC4-215ENST00000484799 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.3□□□□□ -0.925e-8■■■■■ 30.5
SMC4-215ENST00000484799 Q6ZVU0 165 aa9.3□□□□□ -0.92
SMC4-215ENST00000484799 MTMR14Q8NCE2 650 aa9.3□□□□□ -0.92
SMC4-215ENST00000484799 IRF7Q92985 503 aa9.3□□□□□ -0.92
SMC4-215ENST00000484799 POLMQ9NP87 494 aaPredicted RBP9.3□□□□□ -0.92
SMC4-215ENST00000484799 FIGNL2A6NMB9 653 aa9.29□□□□□ -0.92
SMC4-215ENST00000484799 VEGFBP49765 207 aa9.29□□□□□ -0.92
SMC4-215ENST00000484799 NFX1Q12986 1120 aaKnown RBP9.29□□□□□ -0.92
SMC4-215ENST00000484799 AGBL1Q96MI9 1066 aa9.29□□□□□ -0.92
SMC4-215ENST00000484799 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
SMC4-215ENST00000484799 ZNF395Q9H8N7 513 aaPredicted RBP9.28□□□□□ -0.92
SMC4-215ENST00000484799 CYLDQ9NQC7 956 aa9.28□□□□□ -0.92
SMC4-215ENST00000484799 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMC4-215ENST00000484799 INSM1Q01101 510 aaPredicted RBP9.27□□□□□ -0.93
SMC4-215ENST00000484799 SOS2Q07890 1332 aaPredicted RBP9.27□□□□□ -0.93
SMC4-215ENST00000484799 ESPNB1AK53 854 aa9.26□□□□□ -0.93
SMC4-215ENST00000484799 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
SMC4-215ENST00000484799 SPINT1O43278 529 aa9.25□□□□□ -0.93
SMC4-215ENST00000484799 ADH1AP07327 375 aa9.24□□□□□ -0.93
SMC4-215ENST00000484799 ABL2P42684 1182 aa9.24□□□□□ -0.93
SMC4-215ENST00000484799 PTGIRP43119 386 aa9.24□□□□□ -0.93
SMC4-215ENST00000484799 INSM2Q96T92 566 aaPredicted RBP9.24□□□□□ -0.93
SMC4-215ENST00000484799 TBC1D2BQ9UPU7 963 aa9.24□□□□□ -0.93
SMC4-215ENST00000484799 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
SMC4-215ENST00000484799 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
SMC4-215ENST00000484799 DNMT3LQ9UJW3 386 aa9.23□□□□□ -0.93
SMC4-215ENST00000484799 H3BM21 787 aa9.22□□□□□ -0.93
SMC4-215ENST00000484799 MYCP01106 439 aaPredicted RBP9.22□□□□□ -0.93
SMC4-215ENST00000484799 ADD1P35611 737 aaKnown RBP9.22□□□□□ -0.93
SMC4-215ENST00000484799 CC2D2BQ6DHV5 1058 aa9.22□□□□□ -0.93
SMC4-215ENST00000484799 NLRP3Q96P20 1036 aa9.22□□□□□ -0.93
SMC4-215ENST00000484799 MEN1O00255 615 aa9.21□□□□□ -0.94
SMC4-215ENST00000484799 WASHC4Q2M389 1173 aa9.21□□□□□ -0.94
SMC4-215ENST00000484799 SLFNL1Q499Z3 407 aa9.21□□□□□ -0.94
SMC4-215ENST00000484799 GDPD2Q9HCC8 539 aa9.21□□□□□ -0.94
SMC4-215ENST00000484799 RAD21O60216 631 aa9.2□□□□□ -0.94
SMC4-215ENST00000484799 LILRA1O75019 489 aa9.2□□□□□ -0.94
SMC4-215ENST00000484799 PPFIA3O75145 1194 aa9.2□□□□□ -0.94
SMC4-215ENST00000484799 CTSOP43234 321 aaPredicted RBP9.2□□□□□ -0.94
SMC4-215ENST00000484799 SEMA3FQ13275 785 aa9.2□□□□□ -0.94
SMC4-215ENST00000484799 CEP126Q9P2H0 1117 aa9.2□□□□□ -0.94
SMC4-215ENST00000484799 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
SMC4-215ENST00000484799 PTSQ03393 145 aa9.19□□□□□ -0.94
SMC4-215ENST00000484799 CYP2U1Q7Z449 544 aa9.19□□□□□ -0.94
SMC4-215ENST00000484799 WIPF1O43516 503 aa9.18□□□□□ -0.94
SMC4-215ENST00000484799 GMPRP36959 345 aa9.18□□□□□ -0.94
SMC4-215ENST00000484799 SLC27A3Q5K4L6 730 aa9.18□□□□□ -0.94
SMC4-215ENST00000484799 LCE2AQ5TA79 106 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms