RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 APBA3O96018 575 aa16.29■□□□□ 0.2
SCFD1-206ENST00000484733 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
SCFD1-206ENST00000484733 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
SCFD1-206ENST00000484733 PEAK1Q9H792 1746 aa16.29■□□□□ 0.2
SCFD1-206ENST00000484733 ZBTB7CA1YPR0 619 aa16.28■□□□□ 0.2
SCFD1-206ENST00000484733 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
SCFD1-206ENST00000484733 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
SCFD1-206ENST00000484733 CDCA7Q9BWT1 371 aaPredicted RBP16.28■□□□□ 0.2
SCFD1-206ENST00000484733 LRRC37A3O60309 1634 aa16.27■□□□□ 0.2
SCFD1-206ENST00000484733 TOM1L2Q6ZVM7 507 aa16.27■□□□□ 0.2
SCFD1-206ENST00000484733 RGPD5Q99666 1765 aa16.26■□□□□ 0.19
SCFD1-206ENST00000484733 OVOS2A0A0G2JMS6 1433 aa16.26■□□□□ 0.19
SCFD1-206ENST00000484733 OVOS2A0A0J9YW53 1432 aa16.26■□□□□ 0.19
SCFD1-206ENST00000484733 OVOS2Q6IE36 1432 aa16.26■□□□□ 0.19
SCFD1-206ENST00000484733 CARD10Q9BWT7 1032 aa16.25■□□□□ 0.19
SCFD1-206ENST00000484733 BCL9O00512 1426 aa16.25■□□□□ 0.19
SCFD1-206ENST00000484733 R3HDM1Q15032 1099 aaKnown RBP16.25■□□□□ 0.19
SCFD1-206ENST00000484733 DDB1Q16531 1140 aa16.24■□□□□ 0.19
SCFD1-206ENST00000484733 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
SCFD1-206ENST00000484733 NUP188Q5SRE5 1749 aa16.24■□□□□ 0.19
SCFD1-206ENST00000484733 SBF2Q86WG5 1849 aa16.24■□□□□ 0.19
SCFD1-206ENST00000484733 RGPD3A6NKT7 1758 aaPredicted RBP16.24■□□□□ 0.19
SCFD1-206ENST00000484733 RGPD4Q7Z3J3 1758 aa16.24■□□□□ 0.19
SCFD1-206ENST00000484733 SLC24A1O60721 1099 aa16.23■□□□□ 0.19
SCFD1-206ENST00000484733 EDC4Q6P2E9 1401 aaKnown RBP16.23■□□□□ 0.19
SCFD1-206ENST00000484733 CCDC7Q96M83 1385 aa16.23■□□□□ 0.19
SCFD1-206ENST00000484733 TRIM26Q12899 539 aaPredicted RBP16.22■□□□□ 0.19
SCFD1-206ENST00000484733 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
SCFD1-206ENST00000484733 TERF2IPQ9NYB0 399 aa16.22■□□□□ 0.19
SCFD1-206ENST00000484733 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.19
SCFD1-206ENST00000484733 PLSCR1O15162 318 aa16.21■□□□□ 0.19
SCFD1-206ENST00000484733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.21■□□□□ 0.192e-7■■■■□ 19.6
SCFD1-206ENST00000484733 TMC1Q8TDI8 760 aa16.21■□□□□ 0.19
SCFD1-206ENST00000484733 CSB-PGBD3P0DP91 1061 aa16.2■□□□□ 0.18
SCFD1-206ENST00000484733 NBPF14Q5TI25 921 aa16.2■□□□□ 0.18
SCFD1-206ENST00000484733 NME9Q86XW9 330 aa16.2■□□□□ 0.18
SCFD1-206ENST00000484733 SOX12O15370 315 aa16.2■□□□□ 0.18
SCFD1-206ENST00000484733 TESK2Q96S53 571 aa16.2■□□□□ 0.18
SCFD1-206ENST00000484733 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
SCFD1-206ENST00000484733 MARCH10Q8NA82 808 aaPredicted RBP16.19■□□□□ 0.18
SCFD1-206ENST00000484733 A0A1W2PP64 1363 aa16.19■□□□□ 0.18
SCFD1-206ENST00000484733 LTN1O94822 1766 aa16.18■□□□□ 0.18
SCFD1-206ENST00000484733 EXOC5O00471 708 aa16.17■□□□□ 0.18
SCFD1-206ENST00000484733 ST20-MTHFSA0A0A6YYL1 179 aa16.17■□□□□ 0.18
SCFD1-206ENST00000484733 ERBB3P21860 1342 aa16.16■□□□□ 0.18
SCFD1-206ENST00000484733 TNS2Q63HR2 1409 aa16.16■□□□□ 0.18
SCFD1-206ENST00000484733 ANKRD24Q8TF21 1146 aa16.13■□□□□ 0.17
SCFD1-206ENST00000484733 IP6K1Q92551 441 aa16.13■□□□□ 0.17
SCFD1-206ENST00000484733 PTF1AQ7RTS3 328 aa16.12■□□□□ 0.17
SCFD1-206ENST00000484733 NLRP2Q9NX02 1062 aa16.12■□□□□ 0.17
SCFD1-206ENST00000484733 SRCAPQ6ZRS2 3230 aa16.12■□□□□ 0.17
SCFD1-206ENST00000484733 FAM208AQ9UK61 1670 aaKnown RBP16.12■□□□□ 0.17
SCFD1-206ENST00000484733 IL2RBP14784 551 aa16.11■□□□□ 0.17
SCFD1-206ENST00000484733 ANKRD36BQ8N2N9 1353 aa16.11■□□□□ 0.17
SCFD1-206ENST00000484733 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
SCFD1-206ENST00000484733 PROM2Q8N271 834 aa16.11■□□□□ 0.17
SCFD1-206ENST00000484733 TMF1P82094 1093 aa16.1■□□□□ 0.17
SCFD1-206ENST00000484733 COG3Q96JB2 828 aa16.1■□□□□ 0.17
SCFD1-206ENST00000484733 TIMELESSQ9UNS1 1208 aa16.09■□□□□ 0.17
SCFD1-206ENST00000484733 KCNQ2O43526 872 aa16.08■□□□□ 0.17
SCFD1-206ENST00000484733 SPON1Q9HCB6 807 aa16.08■□□□□ 0.17
SCFD1-206ENST00000484733 USP47Q96K76 1375 aa16.08■□□□□ 0.17
SCFD1-206ENST00000484733 CASZ1Q86V15 1759 aa16.08■□□□□ 0.16
SCFD1-206ENST00000484733 ANO8Q9HCE9 1232 aaPredicted RBP16.07■□□□□ 0.16
SCFD1-206ENST00000484733 TXNRD1Q16881 649 aa16.07■□□□□ 0.16
SCFD1-206ENST00000484733 CDCA8Q53HL2 280 aa16.06■□□□□ 0.16
SCFD1-206ENST00000484733 MAP3K19Q56UN5 1328 aa16.06■□□□□ 0.16
SCFD1-206ENST00000484733 HOXC9P31274 260 aa16.06■□□□□ 0.16
SCFD1-206ENST00000484733 RTL1A6NKG5 1358 aa16.05■□□□□ 0.16
SCFD1-206ENST00000484733 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
SCFD1-206ENST00000484733 FYB1O15117 783 aa16.04■□□□□ 0.16
SCFD1-206ENST00000484733 STK32BQ9NY57 414 aa16.03■□□□□ 0.16
SCFD1-206ENST00000484733 AMPHP49418 695 aa16.03■□□□□ 0.16
SCFD1-206ENST00000484733 ACSBG1Q96GR2 724 aa16.02■□□□□ 0.16
SCFD1-206ENST00000484733 BTAF1O14981 1849 aa16.02■□□□□ 0.16
SCFD1-206ENST00000484733 SLC15A2Q16348 729 aa16.02■□□□□ 0.15
SCFD1-206ENST00000484733 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
SCFD1-206ENST00000484733 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
SCFD1-206ENST00000484733 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
SCFD1-206ENST00000484733 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
SCFD1-206ENST00000484733 PPP1R1BQ9UD71 204 aaPredicted RBP16■□□□□ 0.15
SCFD1-206ENST00000484733 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
SCFD1-206ENST00000484733 FBLN1P23142 703 aa16■□□□□ 0.15
SCFD1-206ENST00000484733 GGNBP2Q9H3C7 697 aa16■□□□□ 0.15
SCFD1-206ENST00000484733 MYOM1P52179 1685 aa15.98■□□□□ 0.15
SCFD1-206ENST00000484733 SHANK3Q9BYB0 1731 aa15.98■□□□□ 0.15
SCFD1-206ENST00000484733 CGNL1Q0VF96 1302 aa15.98■□□□□ 0.15
SCFD1-206ENST00000484733 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
SCFD1-206ENST00000484733 DDX54Q8TDD1 881 aaKnown RBP15.97■□□□□ 0.15
SCFD1-206ENST00000484733 PDGFDQ9GZP0 370 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-206ENST00000484733 RRS1Q15050 365 aaKnown RBP15.97■□□□□ 0.15
SCFD1-206ENST00000484733 INSRP06213 1382 aa15.97■□□□□ 0.15
SCFD1-206ENST00000484733 PTGER2P43116 358 aa15.96■□□□□ 0.15
SCFD1-206ENST00000484733 SMG6Q86US8 1419 aaKnown RBP15.96■□□□□ 0.15
SCFD1-206ENST00000484733 MEGF6O75095 1541 aa15.96■□□□□ 0.15
SCFD1-206ENST00000484733 SLC27A3Q5K4L6 730 aa15.96■□□□□ 0.15
SCFD1-206ENST00000484733 NBPF6Q5VWK0 638 aa15.96■□□□□ 0.15
SCFD1-206ENST00000484733 NBPF4Q96M43 638 aa15.96■□□□□ 0.15
SCFD1-206ENST00000484733 CARD14Q9BXL6 1004 aa15.96■□□□□ 0.15
SCFD1-206ENST00000484733 MTFR1LQ9H019 292 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms