RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 COL14A1Q05707 1796 aaKnown RBP12.75□□□□□ -0.37
DDX39B-221ENST00000484566 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
DDX39B-221ENST00000484566 RGL3Q3MIN7 710 aa12.75□□□□□ -0.37
DDX39B-221ENST00000484566 COL13A1Q5TAT6 717 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-221ENST00000484566 NBPF14Q5TI25 921 aa12.75□□□□□ -0.37
DDX39B-221ENST00000484566 PARD3Q8TEW0 1356 aa12.75□□□□□ -0.37
DDX39B-221ENST00000484566 FAM83GA6ND36 823 aa12.74□□□□□ -0.37
DDX39B-221ENST00000484566 FAM182BQ5T319 152 aa12.74□□□□□ -0.37
DDX39B-221ENST00000484566 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
DDX39B-221ENST00000484566 SPATA31E1Q6ZUB1 1445 aa12.73□□□□□ -0.37
DDX39B-221ENST00000484566 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
DDX39B-221ENST00000484566 ANKARQ7Z5J8 1434 aa12.72□□□□□ -0.37
DDX39B-221ENST00000484566 PDAP1Q13442 181 aaKnown RBP12.72□□□□□ -0.37
DDX39B-221ENST00000484566 SIRT1Q96EB6 747 aa12.72□□□□□ -0.37
DDX39B-221ENST00000484566 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
DDX39B-221ENST00000484566 NRKQ7Z2Y5 1582 aa12.72□□□□□ -0.37
DDX39B-221ENST00000484566 SHANK3Q9BYB0 1731 aa12.71□□□□□ -0.37
DDX39B-221ENST00000484566 SYT17Q9BSW7 474 aa12.71□□□□□ -0.37
DDX39B-221ENST00000484566 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.38
DDX39B-221ENST00000484566 GPRASP1Q5JY77 1395 aa12.7□□□□□ -0.38
DDX39B-221ENST00000484566 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
DDX39B-221ENST00000484566 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
DDX39B-221ENST00000484566 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
DDX39B-221ENST00000484566 PSEN1P49768 467 aa12.7□□□□□ -0.38
DDX39B-221ENST00000484566 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
DDX39B-221ENST00000484566 MYOM1P52179 1685 aa12.7□□□□□ -0.38
DDX39B-221ENST00000484566 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
DDX39B-221ENST00000484566 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
DDX39B-221ENST00000484566 APBA3O96018 575 aa12.69□□□□□ -0.38
DDX39B-221ENST00000484566 SAFB2Q14151 953 aaKnown RBP eCLIP12.69□□□□□ -0.38
DDX39B-221ENST00000484566 TMEM106CQ9BVX2 250 aa12.69□□□□□ -0.38
DDX39B-221ENST00000484566 EIF3AQ14152 1382 aaKnown RBP12.69□□□□□ -0.38
DDX39B-221ENST00000484566 TRIM37O94972 964 aa12.68□□□□□ -0.38
DDX39B-221ENST00000484566 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
DDX39B-221ENST00000484566 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
DDX39B-221ENST00000484566 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
DDX39B-221ENST00000484566 RGL2O15211 777 aa12.67□□□□□ -0.38
DDX39B-221ENST00000484566 TNS4Q8IZW8 715 aa12.67□□□□□ -0.38
DDX39B-221ENST00000484566 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-221ENST00000484566 C14orf93Q9H972 538 aaKnown RBP12.67□□□□□ -0.38
DDX39B-221ENST00000484566 PRDM11Q9NQV5 511 aa12.67□□□□□ -0.38
DDX39B-221ENST00000484566 POGKQ9P215 609 aa12.67□□□□□ -0.38
DDX39B-221ENST00000484566 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
DDX39B-221ENST00000484566 CASZ1Q86V15 1759 aa12.66□□□□□ -0.38
DDX39B-221ENST00000484566 CRYBG1Q9Y4K1 1723 aa12.66□□□□□ -0.38
DDX39B-221ENST00000484566 PTGER2P43116 358 aa12.66□□□□□ -0.38
DDX39B-221ENST00000484566 ASTLQ6HA08 431 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-221ENST00000484566 FAM196AQ6ZSG2 479 aa12.66□□□□□ -0.38
DDX39B-221ENST00000484566 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-221ENST00000484566 ACIN1Q9UKV3 1341 aaKnown RBP12.65□□□□□ -0.38
DDX39B-221ENST00000484566 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
DDX39B-221ENST00000484566 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
DDX39B-221ENST00000484566 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.38
DDX39B-221ENST00000484566 TULP4Q9NRJ4 1543 aa12.64□□□□□ -0.39
DDX39B-221ENST00000484566 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
DDX39B-221ENST00000484566 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
DDX39B-221ENST00000484566 DNAJC5GQ8N7S2 189 aa12.64□□□□□ -0.39
DDX39B-221ENST00000484566 SPATA31A1Q5TZJ5 1347 aa12.63□□□□□ -0.39
DDX39B-221ENST00000484566 STRN4Q9NRL3 753 aa12.63□□□□□ -0.39
DDX39B-221ENST00000484566 PCNTO95613 3336 aa12.62□□□□□ -0.39
DDX39B-221ENST00000484566 NGDNQ8NEJ9 315 aaKnown RBP12.62□□□□□ -0.39
DDX39B-221ENST00000484566 MPHOSPH9Q99550 1183 aa12.62□□□□□ -0.39
DDX39B-221ENST00000484566 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
DDX39B-221ENST00000484566 PHRF1Q9P1Y6 1649 aaKnown RBP12.62□□□□□ -0.39
DDX39B-221ENST00000484566 KIAA0232Q92628 1395 aa12.61□□□□□ -0.39
DDX39B-221ENST00000484566 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
DDX39B-221ENST00000484566 PDE3BQ13370 1112 aa12.61□□□□□ -0.39
DDX39B-221ENST00000484566 HIRIP3Q9BW71 556 aaPredicted RBP12.61□□□□□ -0.39
DDX39B-221ENST00000484566 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
DDX39B-221ENST00000484566 USP35Q9P2H5 1018 aa12.6□□□□□ -0.39
DDX39B-221ENST00000484566 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
DDX39B-221ENST00000484566 ATP7BP35670 1465 aa12.59□□□□□ -0.39
DDX39B-221ENST00000484566 ZBTB7AO95365 584 aa12.59□□□□□ -0.39
DDX39B-221ENST00000484566 CHRNA2Q15822 529 aa12.59□□□□□ -0.39
DDX39B-221ENST00000484566 GPR162Q16538 588 aa12.59□□□□□ -0.39
DDX39B-221ENST00000484566 PDGFDQ9GZP0 370 aaPredicted RBP12.59□□□□□ -0.39
DDX39B-221ENST00000484566 ADGRB1O14514 1584 aa12.59□□□□□ -0.39
DDX39B-221ENST00000484566 PRR36Q9H6K5 1346 aa12.59□□□□□ -0.39
DDX39B-221ENST00000484566 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
DDX39B-221ENST00000484566 SSH2Q76I76 1423 aa12.58□□□□□ -0.4
DDX39B-221ENST00000484566 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
DDX39B-221ENST00000484566 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
DDX39B-221ENST00000484566 TRIM35Q9UPQ4 493 aa12.58□□□□□ -0.4
DDX39B-221ENST00000484566 TRAK1Q9UPV9 953 aa12.58□□□□□ -0.4
DDX39B-221ENST00000484566 WASLO00401 505 aaPredicted RBP12.57□□□□□ -0.4
DDX39B-221ENST00000484566 EVA1CP58658 441 aa12.57□□□□□ -0.4
DDX39B-221ENST00000484566 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
DDX39B-221ENST00000484566 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
DDX39B-221ENST00000484566 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
DDX39B-221ENST00000484566 C11orf95C9JLR9 678 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-221ENST00000484566 STK25O00506 426 aa12.55□□□□□ -0.4
DDX39B-221ENST00000484566 C7P10643 843 aa12.55□□□□□ -0.4
DDX39B-221ENST00000484566 APLP1P51693 650 aa12.55□□□□□ -0.4
DDX39B-221ENST00000484566 TCP11L2Q8N4U5 519 aa12.55□□□□□ -0.4
DDX39B-221ENST00000484566 RGPD3A6NKT7 1758 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-221ENST00000484566 RGPD4Q7Z3J3 1758 aa12.55□□□□□ -0.4
DDX39B-221ENST00000484566 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
DDX39B-221ENST00000484566 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-221ENST00000484566 CABP2Q9NPB3 220 aa12.53□□□□□ -0.4
DDX39B-221ENST00000484566 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms