RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 NBPF20Q3BBV1 942 aa10.88□□□□□ -0.67
CCDC66-219ENST00000484441 ESPNB1AK53 854 aa10.87□□□□□ -0.67
CCDC66-219ENST00000484441 CCDC116Q8IYX3 515 aa10.87□□□□□ -0.67
CCDC66-219ENST00000484441 CAPN5O15484 640 aaPredicted RBP10.86□□□□□ -0.67
CCDC66-219ENST00000484441 WDR4P57081 412 aaKnown RBP10.86□□□□□ -0.67
CCDC66-219ENST00000484441 INTS6LQ5JSJ4 861 aaKnown RBP10.86□□□□□ -0.67
CCDC66-219ENST00000484441 DZIP3Q86Y13 1208 aaKnown RBP10.86□□□□□ -0.67
CCDC66-219ENST00000484441 GDPD2Q9HCC8 539 aa10.86□□□□□ -0.67
CCDC66-219ENST00000484441 COG6Q9Y2V7 657 aa10.86□□□□□ -0.67
CCDC66-219ENST00000484441 MCCD1P59942 119 aaPredicted RBP10.85□□□□□ -0.67
CCDC66-219ENST00000484441 ITPKCQ96DU7 683 aa10.85□□□□□ -0.67
CCDC66-219ENST00000484441 ATP13A2Q9NQ11 1180 aa10.85□□□□□ -0.67
CCDC66-219ENST00000484441 SEPT12Q8IYM1 358 aa10.84□□□□□ -0.67
CCDC66-219ENST00000484441 ZNF592Q92610 1267 aa10.84□□□□□ -0.67
CCDC66-219ENST00000484441 EMILIN1Q9Y6C2 1016 aa10.84□□□□□ -0.67
CCDC66-219ENST00000484441 ZIC2O95409 532 aaPredicted RBP10.83□□□□□ -0.68
CCDC66-219ENST00000484441 PCDHB9Q9Y5E1 797 aa10.83□□□□□ -0.68
CCDC66-219ENST00000484441 DHX9Q08211 1270 aaKnown RBP10.82□□□□□ -0.68
CCDC66-219ENST00000484441 PPP1R26Q5T8A7 1209 aaPredicted RBP10.82□□□□□ -0.68
CCDC66-219ENST00000484441 ZFAND3Q9H8U3 227 aa10.82□□□□□ -0.68
CCDC66-219ENST00000484441 ZNF330Q9Y3S2 320 aaPredicted RBP10.82□□□□□ -0.68
CCDC66-219ENST00000484441 TRIM46Q7Z4K8 759 aa10.81□□□□□ -0.68
CCDC66-219ENST00000484441 POTECB2RU33 542 aa10.8□□□□□ -0.68
CCDC66-219ENST00000484441 ABL2P42684 1182 aa10.8□□□□□ -0.68
CCDC66-219ENST00000484441 POM121Q96HA1 1249 aa10.8□□□□□ -0.68
CCDC66-219ENST00000484441 GMPR2Q9P2T1 348 aaKnown RBP10.8□□□□□ -0.68
CCDC66-219ENST00000484441 WASHC4Q2M389 1173 aa10.79□□□□□ -0.68
CCDC66-219ENST00000484441 MEIOBQ8N635 442 aa10.79□□□□□ -0.68
CCDC66-219ENST00000484441 BMP1P13497 986 aa10.78□□□□□ -0.68
CCDC66-219ENST00000484441 CCDC125Q86Z20 511 aa10.78□□□□□ -0.68
CCDC66-219ENST00000484441 PGPEP1Q9NXJ5 209 aa10.78□□□□□ -0.68
CCDC66-219ENST00000484441 ERVH48-1M5A8F1 160 aa10.77□□□□□ -0.69
CCDC66-219ENST00000484441 GIGYF1O75420 1035 aaPredicted RBP10.77□□□□□ -0.69
CCDC66-219ENST00000484441 UBTFP17480 764 aaKnown RBP10.77□□□□□ -0.69
CCDC66-219ENST00000484441 ZNF787Q6DD87 383 aa10.77□□□□□ -0.69
CCDC66-219ENST00000484441 Q6ZVU0 165 aa10.77□□□□□ -0.69
CCDC66-219ENST00000484441 TRIM47Q96LD4 638 aa10.77□□□□□ -0.69
CCDC66-219ENST00000484441 VAC14Q08AM6 782 aa10.76□□□□□ -0.69
CCDC66-219ENST00000484441 MRPL14Q6P1L8 145 aaKnown RBP10.76□□□□□ -0.69
CCDC66-219ENST00000484441 SENP2Q9HC62 589 aa10.76□□□□□ -0.69
CCDC66-219ENST00000484441 EIF4G2P78344 907 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC66-219ENST00000484441 LILRA1O75019 489 aa10.74□□□□□ -0.69
CCDC66-219ENST00000484441 RNF20Q5VTR2 975 aa10.74□□□□□ -0.69
CCDC66-219ENST00000484441 KIFC2Q96AC6 838 aa10.74□□□□□ -0.69
CCDC66-219ENST00000484441 TMPRSS4Q9NRS4 437 aa10.74□□□□□ -0.69
CCDC66-219ENST00000484441 RAD21O60216 631 aa10.73□□□□□ -0.69
CCDC66-219ENST00000484441 SOX11P35716 441 aa10.73□□□□□ -0.69
CCDC66-219ENST00000484441 ZNF784Q8NCA9 323 aaPredicted RBP10.73□□□□□ -0.69
CCDC66-219ENST00000484441 CEP126Q9P2H0 1117 aa10.73□□□□□ -0.69
CCDC66-219ENST00000484441 LINC00528Q8N1L1 170 aa10.72□□□□□ -0.69
CCDC66-219ENST00000484441 ZFP42Q96MM3 310 aa10.72□□□□□ -0.69
CCDC66-219ENST00000484441 RAB15P59190 212 aa10.71□□□□□ -0.69
CCDC66-219ENST00000484441 CBLBQ13191 982 aa10.71□□□□□ -0.69
CCDC66-219ENST00000484441 PHTF2Q8N3S3 785 aa10.71□□□□□ -0.69
CCDC66-219ENST00000484441 C11orf95C9JLR9 678 aaPredicted RBP10.7□□□□□ -0.7
CCDC66-219ENST00000484441 SNRPBP14678 240 aaKnown RBP10.7□□□□□ -0.7
CCDC66-219ENST00000484441 SCARF1Q14162 830 aa10.7□□□□□ -0.7
CCDC66-219ENST00000484441 CHIC2Q9UKJ5 165 aa10.7□□□□□ -0.7
CCDC66-219ENST00000484441 ERVK-9P63128 1117 aa10.69□□□□□ -0.7
CCDC66-219ENST00000484441 FNBP4Q8N3X1 1017 aaPredicted RBP10.69□□□□□ -0.7
CCDC66-219ENST00000484441 TRIM52Q96A61 297 aa10.69□□□□□ -0.7
CCDC66-219ENST00000484441 PURBQ96QR8 312 aaKnown RBP10.69□□□□□ -0.7
CCDC66-219ENST00000484441 TSEN34Q9BSV6 310 aaKnown RBP10.69□□□□□ -0.7
CCDC66-219ENST00000484441 ADD1P35611 737 aaKnown RBP10.68□□□□□ -0.7
CCDC66-219ENST00000484441 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
CCDC66-219ENST00000484441 A6NJR5 290 aa10.67□□□□□ -0.7
CCDC66-219ENST00000484441 ADH1AP07327 375 aa10.67□□□□□ -0.7
CCDC66-219ENST00000484441 KDF1Q8NAX2 398 aaPredicted RBP10.67□□□□□ -0.7
CCDC66-219ENST00000484441 CLUAP1Q96AJ1 413 aa10.67□□□□□ -0.7
CCDC66-219ENST00000484441 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
CCDC66-219ENST00000484441 ALG2Q9H553 416 aa10.67□□□□□ -0.7
CCDC66-219ENST00000484441 SPINT1O43278 529 aa10.66□□□□□ -0.7
CCDC66-219ENST00000484441 CYLDQ9NQC7 956 aa10.66□□□□□ -0.7
CCDC66-219ENST00000484441 UPP2O95045 317 aa10.65□□□□□ -0.7
CCDC66-219ENST00000484441 CC2D2BQ6DHV5 1058 aa10.65□□□□□ -0.7
CCDC66-219ENST00000484441 PROSER2Q86WR7 435 aaPredicted RBP10.65□□□□□ -0.7
CCDC66-219ENST00000484441 PCDHB11Q9Y5F2 797 aa10.65□□□□□ -0.7
CCDC66-219ENST00000484441 SCTRP47872 440 aa10.64□□□□□ -0.71
CCDC66-219ENST00000484441 C6orf118Q5T5N4 469 aa10.64□□□□□ -0.71
CCDC66-219ENST00000484441 SOS2Q07890 1332 aaPredicted RBP10.63□□□□□ -0.71
CCDC66-219ENST00000484441 POM121CA8CG34 1229 aa10.63□□□□□ -0.71
CCDC66-219ENST00000484441 TRAK2O60296 914 aa10.63□□□□□ -0.71
CCDC66-219ENST00000484441 BMP2P12643 396 aa10.63□□□□□ -0.71
CCDC66-219ENST00000484441 SEMA3FQ13275 785 aa10.63□□□□□ -0.71
CCDC66-219ENST00000484441 ADAMTS19Q8TE59 1207 aa10.63□□□□□ -0.71
CCDC66-219ENST00000484441 SLFNL1Q499Z3 407 aa10.62□□□□□ -0.71
CCDC66-219ENST00000484441 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
CCDC66-219ENST00000484441 AGBL1Q96MI9 1066 aa10.62□□□□□ -0.71
CCDC66-219ENST00000484441 CDCA7Q9BWT1 371 aaPredicted RBP10.61□□□□□ -0.71
CCDC66-219ENST00000484441 OSBPL3Q9H4L5 887 aa10.61□□□□□ -0.71
CCDC66-219ENST00000484441 PTGIRP43119 386 aa10.6□□□□□ -0.71
CCDC66-219ENST00000484441 RELBQ01201 579 aa10.6□□□□□ -0.71
CCDC66-219ENST00000484441 TSGA10IPQ3SY00 556 aa10.6□□□□□ -0.71
CCDC66-219ENST00000484441 ZNF775Q96BV0 537 aaPredicted RBP10.6□□□□□ -0.71
CCDC66-219ENST00000484441 NFATC2IPQ8NCF5 419 aa10.59□□□□□ -0.71
CCDC66-219ENST00000484441 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
CCDC66-219ENST00000484441 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
CCDC66-219ENST00000484441 MAP7D1Q3KQU3 841 aa10.58□□□□□ -0.72
CCDC66-219ENST00000484441 CYP2U1Q7Z449 544 aa10.58□□□□□ -0.72
CCDC66-219ENST00000484441 DNMT3LQ9UJW3 386 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms