RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 WDR17Q8IZU2 1322 aa40.07■■■■■ 4
HLA-C-207ENST00000484378 USP54Q70EL1 1684 aa40.05■■■■■ 4
HLA-C-207ENST00000484378 ST20-MTHFSA0A0A6YYL1 179 aa40.05■■■■■ 4
HLA-C-207ENST00000484378 PUS7Q96PZ0 661 aaKnown RBP40.05■■■■■ 4
HLA-C-207ENST00000484378 TERF2IPQ9NYB0 399 aa40.04■■■■■ 4
HLA-C-207ENST00000484378 USP31Q70CQ4 1352 aa40.04■■■■■ 4
HLA-C-207ENST00000484378 EDC4Q6P2E9 1401 aaKnown RBP40.04■■■■■ 4
HLA-C-207ENST00000484378 RGPD5Q99666 1765 aa40.04■■■■■ 4
HLA-C-207ENST00000484378 NME9Q86XW9 330 aa40.03■■■■■ 4
HLA-C-207ENST00000484378 TESK2Q96S53 571 aa40.03■■■■■ 4
HLA-C-207ENST00000484378 A0A1W2PP64 1363 aa40.02■■■■■ 4
HLA-C-207ENST00000484378 LRRC37A3O60309 1634 aa40.02■■■■■ 4
HLA-C-207ENST00000484378 ABCC6O95255 1503 aa40.01■■■■■ 4
HLA-C-207ENST00000484378 WNK3Q9BYP7 1800 aa40■■■■□ 3.99
HLA-C-207ENST00000484378 CSB-PGBD3P0DP91 1061 aa40■■■■□ 3.99
HLA-C-207ENST00000484378 APBA3O96018 575 aa39.98■■■■□ 3.99
HLA-C-207ENST00000484378 NINLQ9Y2I6 1382 aa39.97■■■■□ 3.99
HLA-C-207ENST00000484378 SLC24A1O60721 1099 aa39.97■■■■□ 3.99
HLA-C-207ENST00000484378 EZH2Q15910 746 aaKnown RBP39.97■■■■□ 3.99
HLA-C-207ENST00000484378 PSDA5PKW4 1024 aaPredicted RBP39.96■■■■□ 3.99
HLA-C-207ENST00000484378 OVOS2A0A0G2JMS6 1433 aa39.95■■■■□ 3.99
HLA-C-207ENST00000484378 OVOS2A0A0J9YW53 1432 aa39.95■■■■□ 3.99
HLA-C-207ENST00000484378 DDB1Q16531 1140 aa39.95■■■■□ 3.99
HLA-C-207ENST00000484378 OVOS2Q6IE36 1432 aa39.95■■■■□ 3.99
HLA-C-207ENST00000484378 CAMKK2Q96RR4 588 aa39.93■■■■□ 3.98
HLA-C-207ENST00000484378 CARD10Q9BWT7 1032 aa39.93■■■■□ 3.98
HLA-C-207ENST00000484378 PARD3Q8TEW0 1356 aa39.93■■■■□ 3.98
HLA-C-207ENST00000484378 USP47Q96K76 1375 aa39.93■■■■□ 3.98
HLA-C-207ENST00000484378 C11orf95C9JLR9 678 aaPredicted RBP39.92■■■■□ 3.98
HLA-C-207ENST00000484378 LTN1O94822 1766 aa39.92■■■■□ 3.98
HLA-C-207ENST00000484378 PEAK1Q9H792 1746 aa39.91■■■■□ 3.98
HLA-C-207ENST00000484378 CDCA7Q9BWT1 371 aaPredicted RBP39.91■■■■□ 3.98
HLA-C-207ENST00000484378 CCDC7Q96M83 1385 aa39.86■■■■□ 3.97
HLA-C-207ENST00000484378 LRP5O75197 1615 aa39.86■■■■□ 3.97
HLA-C-207ENST00000484378 R3HDM1Q15032 1099 aaKnown RBP39.85■■■■□ 3.97
HLA-C-207ENST00000484378 RREB1Q92766 1687 aa39.85■■■■□ 3.97
HLA-C-207ENST00000484378 TMF1P82094 1093 aa39.83■■■■□ 3.97
HLA-C-207ENST00000484378 ERBB3P21860 1342 aa39.83■■■■□ 3.97
HLA-C-207ENST00000484378 PCGF6Q9BYE7 350 aa39.82■■■■□ 3.97
HLA-C-207ENST00000484378 SBF2Q86WG5 1849 aa39.8■■■■□ 3.96
HLA-C-207ENST00000484378 ANKRD36BQ8N2N9 1353 aa39.8■■■■□ 3.96
HLA-C-207ENST00000484378 NUP188Q5SRE5 1749 aa39.79■■■■□ 3.96
HLA-C-207ENST00000484378 MARCH10Q8NA82 808 aaPredicted RBP39.78■■■■□ 3.96
HLA-C-207ENST00000484378 CLSPNQ9HAW4 1339 aa39.78■■■■□ 3.96
HLA-C-207ENST00000484378 NLRP2Q9NX02 1062 aa39.77■■■■□ 3.96
HLA-C-207ENST00000484378 TIMELESSQ9UNS1 1208 aa39.77■■■■□ 3.96
HLA-C-207ENST00000484378 TNS2Q63HR2 1409 aa39.75■■■■□ 3.95
HLA-C-207ENST00000484378 ANKRD24Q8TF21 1146 aa39.75■■■■□ 3.95
HLA-C-207ENST00000484378 COG3Q96JB2 828 aa39.75■■■■□ 3.95
HLA-C-207ENST00000484378 EXOC5O00471 708 aa39.74■■■■□ 3.95
HLA-C-207ENST00000484378 BCL9O00512 1426 aa39.73■■■■□ 3.95
HLA-C-207ENST00000484378 RGPD3A6NKT7 1758 aaPredicted RBP39.71■■■■□ 3.95
HLA-C-207ENST00000484378 RGPD4Q7Z3J3 1758 aa39.71■■■■□ 3.95
HLA-C-207ENST00000484378 CDCA8Q53HL2 280 aa39.7■■■■□ 3.95
HLA-C-207ENST00000484378 BCL11BQ9C0K0 894 aaPredicted RBP39.7■■■■□ 3.95
HLA-C-207ENST00000484378 NBPF14Q5TI25 921 aa39.68■■■■□ 3.94
HLA-C-207ENST00000484378 IP6K1Q92551 441 aa39.67■■■■□ 3.94
HLA-C-207ENST00000484378 FAM208AQ9UK61 1670 aaKnown RBP39.65■■■■□ 3.94
HLA-C-207ENST00000484378 IL2RBP14784 551 aa39.65■■■■□ 3.94
HLA-C-207ENST00000484378 PTF1AQ7RTS3 328 aa39.65■■■■□ 3.94
HLA-C-207ENST00000484378 PLSCR1O15162 318 aa39.64■■■■□ 3.94
HLA-C-207ENST00000484378 MAP3K19Q56UN5 1328 aa39.63■■■■□ 3.93
HLA-C-207ENST00000484378 LTV1Q96GA3 475 aaPredicted RBP39.62■■■■□ 3.93
HLA-C-207ENST00000484378 AMPHP49418 695 aa39.59■■■■□ 3.93
HLA-C-207ENST00000484378 GGNBP2Q9H3C7 697 aa39.58■■■■□ 3.93
HLA-C-207ENST00000484378 MYOM1P52179 1685 aa39.57■■■■□ 3.93
HLA-C-207ENST00000484378 FYB1O15117 783 aa39.57■■■■□ 3.93
HLA-C-207ENST00000484378 FBLN1P23142 703 aa39.57■■■■□ 3.93
HLA-C-207ENST00000484378 HOXC9P31274 260 aa39.57■■■■□ 3.93
HLA-C-207ENST00000484378 KIF20BQ96Q89 1820 aa39.56■■■■□ 3.92
HLA-C-207ENST00000484378 NHSQ6T4R5 1651 aa39.55■■■■□ 3.92
HLA-C-207ENST00000484378 RTL1A6NKG5 1358 aa39.54■■■■□ 3.92
HLA-C-207ENST00000484378 RRS1Q15050 365 aaKnown RBP39.5■■■■□ 3.91
HLA-C-207ENST00000484378 KCNQ2O43526 872 aa39.49■■■■□ 3.91
HLA-C-207ENST00000484378 ACSBG1Q96GR2 724 aa39.49■■■■□ 3.91
HLA-C-207ENST00000484378 CCER1Q8TC90 406 aaPredicted RBP39.48■■■■□ 3.91
HLA-C-207ENST00000484378 NSD3Q9BZ95 1437 aa39.47■■■■□ 3.91
HLA-C-207ENST00000484378 ANO8Q9HCE9 1232 aaPredicted RBP39.46■■■■□ 3.91
HLA-C-207ENST00000484378 PROM2Q8N271 834 aa39.45■■■■□ 3.91
HLA-C-207ENST00000484378 RGPD2P0DJD1 1756 aa39.45■■■■□ 3.91
HLA-C-207ENST00000484378 TXNRD1Q16881 649 aa39.43■■■■□ 3.9
HLA-C-207ENST00000484378 CARD14Q9BXL6 1004 aa39.43■■■■□ 3.9
HLA-C-207ENST00000484378 SMG6Q86US8 1419 aaKnown RBP39.42■■■■□ 3.9
HLA-C-207ENST00000484378 DDX54Q8TDD1 881 aaKnown RBP39.4■■■■□ 3.9
HLA-C-207ENST00000484378 BTAF1O14981 1849 aa39.39■■■■□ 3.9
HLA-C-207ENST00000484378 MEGF6O75095 1541 aa39.37■■■■□ 3.89
HLA-C-207ENST00000484378 POLR3GLQ9BT43 218 aa39.37■■■■□ 3.89
HLA-C-207ENST00000484378 FLT4P35916 1363 aa39.36■■■■□ 3.89
HLA-C-207ENST00000484378 KAT6BQ8WYB5 2073 aa39.36■■■■□ 3.89
HLA-C-207ENST00000484378 SPON1Q9HCB6 807 aa39.36■■■■□ 3.89
HLA-C-207ENST00000484378 KIF24Q5T7B8 1368 aa39.34■■■■□ 3.89
HLA-C-207ENST00000484378 INSRP06213 1382 aa39.33■■■■□ 3.89
HLA-C-207ENST00000484378 CASZ1Q86V15 1759 aa39.33■■■■□ 3.89
HLA-C-207ENST00000484378 EIF4G2P78344 907 aaKnown RBP eCLIP39.33■■■■□ 3.89
HLA-C-207ENST00000484378 NBPF6Q5VWK0 638 aa39.33■■■■□ 3.89
HLA-C-207ENST00000484378 NBPF4Q96M43 638 aa39.33■■■■□ 3.89
HLA-C-207ENST00000484378 STK32BQ9NY57 414 aa39.33■■■■□ 3.89
HLA-C-207ENST00000484378 SHANK3Q9BYB0 1731 aa39.31■■■■□ 3.88
HLA-C-207ENST00000484378 HSP90AB2PQ58FF8 381 aa39.31■■■■□ 3.88
HLA-C-207ENST00000484378 USHBP1Q8N6Y0 703 aa39.31■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms