RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CDCA8Q53HL2 280 aa18.03■□□□□ 0.48
HDAC1-209ENST00000484305 FAM182BQ5T319 152 aa18.03■□□□□ 0.48
HDAC1-209ENST00000484305 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
HDAC1-209ENST00000484305 LTN1O94822 1766 aa18.03■□□□□ 0.48
HDAC1-209ENST00000484305 CRB1P82279 1406 aa18.03■□□□□ 0.48
HDAC1-209ENST00000484305 ANKRD36BQ8N2N9 1353 aa18.03■□□□□ 0.48
HDAC1-209ENST00000484305 OVOS2A0A0J9YW53 1432 aa18.02■□□□□ 0.48
HDAC1-209ENST00000484305 BLMP54132 1417 aaPredicted RBP18.02■□□□□ 0.48
HDAC1-209ENST00000484305 OVOS2Q6IE36 1432 aa18.02■□□□□ 0.48
HDAC1-209ENST00000484305 MYOM1P52179 1685 aa18.02■□□□□ 0.47
HDAC1-209ENST00000484305 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
HDAC1-209ENST00000484305 TOM1L2Q6ZVM7 507 aa18■□□□□ 0.47
HDAC1-209ENST00000484305 WDR17Q8IZU2 1322 aa17.99■□□□□ 0.47
HDAC1-209ENST00000484305 EIF4G2P78344 907 aaKnown RBP eCLIP17.99■□□□□ 0.47
HDAC1-209ENST00000484305 ABCC6O95255 1503 aa17.98■□□□□ 0.47
HDAC1-209ENST00000484305 HSPA5P11021 654 aaKnown RBP17.98■□□□□ 0.47
HDAC1-209ENST00000484305 PARP4Q9UKK3 1724 aaKnown RBP17.98■□□□□ 0.47
HDAC1-209ENST00000484305 COG3Q96JB2 828 aa17.97■□□□□ 0.47
HDAC1-209ENST00000484305 WNK3Q9BYP7 1800 aa17.96■□□□□ 0.47
HDAC1-209ENST00000484305 FYB1O15117 783 aa17.96■□□□□ 0.47
HDAC1-209ENST00000484305 CSB-PGBD3P0DP91 1061 aa17.96■□□□□ 0.47
HDAC1-209ENST00000484305 SF3B2Q13435 895 aaKnown RBP17.96■□□□□ 0.47
HDAC1-209ENST00000484305 DEFB132Q7Z7B7 95 aa17.96■□□□□ 0.47
HDAC1-209ENST00000484305 FBLN1P23142 703 aa17.95■□□□□ 0.46
HDAC1-209ENST00000484305 PDE3BQ13370 1112 aa17.95■□□□□ 0.46
HDAC1-209ENST00000484305 CARD14Q9BXL6 1004 aa17.95■□□□□ 0.46
HDAC1-209ENST00000484305 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
HDAC1-209ENST00000484305 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
HDAC1-209ENST00000484305 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
HDAC1-209ENST00000484305 CARD10Q9BWT7 1032 aa17.94■□□□□ 0.46
HDAC1-209ENST00000484305 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
HDAC1-209ENST00000484305 POLR3GLQ9BT43 218 aa17.93■□□□□ 0.46
HDAC1-209ENST00000484305 LRRC37A3O60309 1634 aa17.93■□□□□ 0.46
HDAC1-209ENST00000484305 ERBB3P21860 1342 aa17.92■□□□□ 0.46
HDAC1-209ENST00000484305 TNS1Q9HBL0 1735 aaKnown RBP17.92■□□□□ 0.46
HDAC1-209ENST00000484305 ANKRD24Q8TF21 1146 aa17.91■□□□□ 0.46
HDAC1-209ENST00000484305 IP6K1Q92551 441 aa17.91■□□□□ 0.46
HDAC1-209ENST00000484305 MAP3K19Q56UN5 1328 aa17.91■□□□□ 0.46
HDAC1-209ENST00000484305 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
HDAC1-209ENST00000484305 TRIM37O94972 964 aa17.9■□□□□ 0.46
HDAC1-209ENST00000484305 DDB1Q16531 1140 aa17.9■□□□□ 0.46
HDAC1-209ENST00000484305 DISP2A7MBM2 1401 aa17.89■□□□□ 0.46
HDAC1-209ENST00000484305 BAG6P46379 1132 aa17.89■□□□□ 0.45
HDAC1-209ENST00000484305 CDCA7Q9BWT1 371 aaPredicted RBP17.89■□□□□ 0.45
HDAC1-209ENST00000484305 NLRP2Q9NX02 1062 aa17.89■□□□□ 0.45
HDAC1-209ENST00000484305 CCDC7Q96M83 1385 aa17.89■□□□□ 0.45
HDAC1-209ENST00000484305 PEAK1Q9H792 1746 aa17.89■□□□□ 0.45
HDAC1-209ENST00000484305 C11orf95C9JLR9 678 aaPredicted RBP17.88■□□□□ 0.45
HDAC1-209ENST00000484305 RRS1Q15050 365 aaKnown RBP17.88■□□□□ 0.45
HDAC1-209ENST00000484305 HOXC9P31274 260 aa17.87■□□□□ 0.45
HDAC1-209ENST00000484305 AMPHP49418 695 aa17.87■□□□□ 0.45
HDAC1-209ENST00000484305 EN1Q05925 392 aaPredicted RBP17.87■□□□□ 0.45
HDAC1-209ENST00000484305 SBF2Q86WG5 1849 aa17.86■□□□□ 0.45
HDAC1-209ENST00000484305 LTV1Q96GA3 475 aaPredicted RBP17.86■□□□□ 0.45
HDAC1-209ENST00000484305 RGPD2P0DJD1 1756 aa17.86■□□□□ 0.45
HDAC1-209ENST00000484305 OVOS2A0A0G2JMS6 1433 aa17.85■□□□□ 0.45
HDAC1-209ENST00000484305 MARCH10Q8NA82 808 aaPredicted RBP17.85■□□□□ 0.45
HDAC1-209ENST00000484305 FAM208AQ9UK61 1670 aaKnown RBP17.85■□□□□ 0.45
HDAC1-209ENST00000484305 EXOC5O00471 708 aa17.84■□□□□ 0.45
HDAC1-209ENST00000484305 CGNL1Q0VF96 1302 aa17.83■□□□□ 0.44
HDAC1-209ENST00000484305 APBA3O96018 575 aa17.83■□□□□ 0.44
HDAC1-209ENST00000484305 RTL1A6NKG5 1358 aa17.82■□□□□ 0.44
HDAC1-209ENST00000484305 IL2RBP14784 551 aa17.82■□□□□ 0.44
HDAC1-209ENST00000484305 EZH2Q15910 746 aaKnown RBP17.82■□□□□ 0.44
HDAC1-209ENST00000484305 PANK3Q9H999 370 aa17.82■□□□□ 0.44
HDAC1-209ENST00000484305 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
HDAC1-209ENST00000484305 CAMKK2Q96RR4 588 aa17.81■□□□□ 0.44
HDAC1-209ENST00000484305 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
HDAC1-209ENST00000484305 ANKRD26Q9UPS8 1709 aa17.8■□□□□ 0.44
HDAC1-209ENST00000484305 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
HDAC1-209ENST00000484305 EMILIN1Q9Y6C2 1016 aa17.79■□□□□ 0.44
HDAC1-209ENST00000484305 BCL9O00512 1426 aa17.79■□□□□ 0.44
HDAC1-209ENST00000484305 PTF1AQ7RTS3 328 aa17.78■□□□□ 0.44
HDAC1-209ENST00000484305 INSRP06213 1382 aa17.78■□□□□ 0.44
HDAC1-209ENST00000484305 FLT4P35916 1363 aa17.78■□□□□ 0.44
HDAC1-209ENST00000484305 KIF7Q2M1P5 1343 aa17.77■□□□□ 0.44
HDAC1-209ENST00000484305 NBPF6Q5VWK0 638 aa17.77■□□□□ 0.44
HDAC1-209ENST00000484305 NBPF4Q96M43 638 aa17.77■□□□□ 0.44
HDAC1-209ENST00000484305 KIF24Q5T7B8 1368 aa17.77■□□□□ 0.43
HDAC1-209ENST00000484305 RREB1Q92766 1687 aa17.77■□□□□ 0.43
HDAC1-209ENST00000484305 BCL11BQ9C0K0 894 aaPredicted RBP17.76■□□□□ 0.43
HDAC1-209ENST00000484305 KAT6BQ8WYB5 2073 aa17.75■□□□□ 0.43
HDAC1-209ENST00000484305 SMG6Q86US8 1419 aaKnown RBP17.75■□□□□ 0.43
HDAC1-209ENST00000484305 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
HDAC1-209ENST00000484305 PARD3Q8TEW0 1356 aa17.75■□□□□ 0.43
HDAC1-209ENST00000484305 PPM1GO15355 546 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-209ENST00000484305 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-209ENST00000484305 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
HDAC1-209ENST00000484305 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
HDAC1-209ENST00000484305 POLKQ9UBT6 870 aa17.73■□□□□ 0.43
HDAC1-209ENST00000484305 MEGF6O75095 1541 aa17.72■□□□□ 0.43
HDAC1-209ENST00000484305 SHANK3Q9BYB0 1731 aa17.72■□□□□ 0.43
HDAC1-209ENST00000484305 RGPD3A6NKT7 1758 aaPredicted RBP17.72■□□□□ 0.43
HDAC1-209ENST00000484305 RGPD4Q7Z3J3 1758 aa17.72■□□□□ 0.43
HDAC1-209ENST00000484305 NHSQ6T4R5 1651 aa17.72■□□□□ 0.43
HDAC1-209ENST00000484305 KCNQ2O43526 872 aa17.72■□□□□ 0.43
HDAC1-209ENST00000484305 DDX54Q8TDD1 881 aaKnown RBP17.72■□□□□ 0.43
HDAC1-209ENST00000484305 ACSBG1Q96GR2 724 aa17.72■□□□□ 0.43
HDAC1-209ENST00000484305 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
HDAC1-209ENST00000484305 PLSCR1O15162 318 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms