RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 IL27Q8NEV9 243 aa10.98□□□□□ -0.65
SCAF11-207ENST00000484275 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
SCAF11-207ENST00000484275 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
SCAF11-207ENST00000484275 LINC00528Q8N1L1 170 aa10.97□□□□□ -0.65
SCAF11-207ENST00000484275 H3BM21 787 aa10.95□□□□□ -0.66
SCAF11-207ENST00000484275 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
SCAF11-207ENST00000484275 PPP1R26Q5T8A7 1209 aaPredicted RBP10.95□□□□□ -0.66
SCAF11-207ENST00000484275 ZBTB33Q86T24 672 aa10.95□□□□□ -0.66
SCAF11-207ENST00000484275 ADAM32Q8TC27 787 aa10.95□□□□□ -0.66
SCAF11-207ENST00000484275 KCTD15Q96SI1 283 aaPredicted RBP10.95□□□□□ -0.66
SCAF11-207ENST00000484275 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
SCAF11-207ENST00000484275 PTK2Q05397 1052 aa10.94□□□□□ -0.66
SCAF11-207ENST00000484275 NPAS3Q8IXF0 933 aa10.94□□□□□ -0.66
SCAF11-207ENST00000484275 SLC10A4Q96EP9 437 aa10.94□□□□□ -0.66
SCAF11-207ENST00000484275 PCMTD1Q96MG8 357 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-207ENST00000484275 TRIM34Q9BYJ4 488 aa10.94□□□□□ -0.66
SCAF11-207ENST00000484275 ERBB4Q15303 1308 aa10.93□□□□□ -0.66
SCAF11-207ENST00000484275 BMP2P12643 396 aa10.93□□□□□ -0.66
SCAF11-207ENST00000484275 CBLBQ13191 982 aa10.93□□□□□ -0.66
SCAF11-207ENST00000484275 SLC16A10Q8TF71 515 aa10.93□□□□□ -0.66
SCAF11-207ENST00000484275 GPSM3Q9Y4H4 160 aa10.93□□□□□ -0.66
SCAF11-207ENST00000484275 GMPRP36959 345 aa10.92□□□□□ -0.66
SCAF11-207ENST00000484275 SOS2Q07890 1332 aaPredicted RBP10.91□□□□□ -0.66
SCAF11-207ENST00000484275 INTS6LQ5JSJ4 861 aaKnown RBP10.91□□□□□ -0.66
SCAF11-207ENST00000484275 MAN1A2O60476 641 aa10.9□□□□□ -0.66
SCAF11-207ENST00000484275 Q6ZVU0 165 aa10.9□□□□□ -0.66
SCAF11-207ENST00000484275 DNMT3LQ9UJW3 386 aa10.9□□□□□ -0.66
SCAF11-207ENST00000484275 UPP2O95045 317 aa10.89□□□□□ -0.67
SCAF11-207ENST00000484275 IRF7Q92985 503 aa10.89□□□□□ -0.67
SCAF11-207ENST00000484275 CDV3Q9UKY7 258 aaKnown RBP10.89□□□□□ -0.67
SCAF11-207ENST00000484275 INSM1Q01101 510 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-207ENST00000484275 TMEM259Q4ZIN3 620 aa10.88□□□□□ -0.67
SCAF11-207ENST00000484275 GJD4Q96KN9 370 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-207ENST00000484275 TSEN34Q9BSV6 310 aaKnown RBP10.88□□□□□ -0.67
SCAF11-207ENST00000484275 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
SCAF11-207ENST00000484275 LORP23490 312 aaPredicted RBP10.86□□□□□ -0.67
SCAF11-207ENST00000484275 TMPRSS4Q9NRS4 437 aa10.85□□□□□ -0.67
SCAF11-207ENST00000484275 DHX9Q08211 1270 aaKnown RBP10.84□□□□□ -0.67
SCAF11-207ENST00000484275 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
SCAF11-207ENST00000484275 PNMA1Q8ND90 353 aa10.84□□□□□ -0.67
SCAF11-207ENST00000484275 AGBL1Q96MI9 1066 aa10.84□□□□□ -0.67
SCAF11-207ENST00000484275 STK17AQ9UEE5 414 aa10.84□□□□□ -0.67
SCAF11-207ENST00000484275 TTLL8A6PVC2 850 aa10.83□□□□□ -0.68
SCAF11-207ENST00000484275 SPINT1O43278 529 aa10.83□□□□□ -0.68
SCAF11-207ENST00000484275 RAB15P59190 212 aa10.83□□□□□ -0.68
SCAF11-207ENST00000484275 NBPF20Q3BBV1 942 aa10.83□□□□□ -0.68
SCAF11-207ENST00000484275 DZIP3Q86Y13 1208 aaKnown RBP10.83□□□□□ -0.68
SCAF11-207ENST00000484275 PPFIA3O75145 1194 aa10.82□□□□□ -0.68
SCAF11-207ENST00000484275 VSIG8P0DPA2 414 aa10.82□□□□□ -0.68
SCAF11-207ENST00000484275 ZNF784Q8NCA9 323 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-207ENST00000484275 ESPNB1AK53 854 aa10.81□□□□□ -0.68
SCAF11-207ENST00000484275 ERVH48-1M5A8F1 160 aa10.81□□□□□ -0.68
SCAF11-207ENST00000484275 FIGNL2A6NMB9 653 aa10.8□□□□□ -0.68
SCAF11-207ENST00000484275 LILRA1O75019 489 aa10.8□□□□□ -0.68
SCAF11-207ENST00000484275 FBXO45P0C2W1 286 aa10.8□□□□□ -0.68
SCAF11-207ENST00000484275 ADD1P35611 737 aaKnown RBP10.8□□□□□ -0.68
SCAF11-207ENST00000484275 GPR37L1O60883 481 aa10.79□□□□□ -0.68
SCAF11-207ENST00000484275 RELBQ01201 579 aa10.79□□□□□ -0.68
SCAF11-207ENST00000484275 KDF1Q8NAX2 398 aaPredicted RBP10.79□□□□□ -0.68
SCAF11-207ENST00000484275 ZBBXA8MT70 800 aa10.78□□□□□ -0.68
SCAF11-207ENST00000484275 CTSOP43234 321 aaPredicted RBP10.78□□□□□ -0.68
SCAF11-207ENST00000484275 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.78□□□□□ -0.68
SCAF11-207ENST00000484275 INSM2Q96T92 566 aaPredicted RBP10.78□□□□□ -0.68
SCAF11-207ENST00000484275 PTSQ03393 145 aa10.77□□□□□ -0.69
SCAF11-207ENST00000484275 MTMR14Q8NCE2 650 aa10.77□□□□□ -0.69
SCAF11-207ENST00000484275 ZNF395Q9H8N7 513 aaPredicted RBP10.77□□□□□ -0.69
SCAF11-207ENST00000484275 ADH1AP07327 375 aa10.75□□□□□ -0.69
SCAF11-207ENST00000484275 ZSCAN1Q8NBB4 408 aa10.75□□□□□ -0.69
SCAF11-207ENST00000484275 BANK1Q8NDB2 785 aa10.75□□□□□ -0.69
SCAF11-207ENST00000484275 SNRKQ9NRH2 765 aa10.75□□□□□ -0.69
SCAF11-207ENST00000484275 PCDHB9Q9Y5E1 797 aa10.75□□□□□ -0.69
SCAF11-207ENST00000484275 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
SCAF11-207ENST00000484275 SEPT12Q8IYM1 358 aa10.73□□□□□ -0.69
SCAF11-207ENST00000484275 GPR161Q8N6U8 529 aaKnown RBP10.73□□□□□ -0.69
SCAF11-207ENST00000484275 CYLDQ9NQC7 956 aa10.73□□□□□ -0.69
SCAF11-207ENST00000484275 RNF217Q8TC41 542 aa10.72□□□□□ -0.69
SCAF11-207ENST00000484275 PTGIRP43119 386 aa10.71□□□□□ -0.69
SCAF11-207ENST00000484275 FOXD4L5Q5VV16 416 aaPredicted RBP10.71□□□□□ -0.69
SCAF11-207ENST00000484275 CCDC155Q8N6L0 562 aa10.71□□□□□ -0.69
SCAF11-207ENST00000484275 POLMQ9NP87 494 aaPredicted RBP10.71□□□□□ -0.69
SCAF11-207ENST00000484275 SLC35F4A4IF30 521 aa10.7□□□□□ -0.7
SCAF11-207ENST00000484275 SOCS7O14512 581 aa10.69□□□□□ -0.7
SCAF11-207ENST00000484275 KRT76Q01546 638 aa10.69□□□□□ -0.7
SCAF11-207ENST00000484275 NR1H3Q13133 447 aa10.69□□□□□ -0.7
SCAF11-207ENST00000484275 SENP3-EIF4A1A0A087X0R7 540 aa10.68□□□□□ -0.7
SCAF11-207ENST00000484275 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
SCAF11-207ENST00000484275 NANOS1Q8WY41 292 aaKnown RBP10.66□□□□□ -0.7
SCAF11-207ENST00000484275 ITGA6P23229 1130 aa10.64□□□□□ -0.71
SCAF11-207ENST00000484275 SCTRP47872 440 aa10.64□□□□□ -0.71
SCAF11-207ENST00000484275 ERVK-9P63128 1117 aa10.64□□□□□ -0.71
SCAF11-207ENST00000484275 FAM181BA6NEQ2 426 aa10.62□□□□□ -0.71
SCAF11-207ENST00000484275 ATP5J2-PTCD1G3V325 749 aa10.62□□□□□ -0.71
SCAF11-207ENST00000484275 CNTNAP3BQ96NU0 1288 aa10.62□□□□□ -0.71
SCAF11-207ENST00000484275 CNTNAP3Q9BZ76 1288 aa10.62□□□□□ -0.71
SCAF11-207ENST00000484275 RNF144AP50876 292 aaPredicted RBP10.61□□□□□ -0.71
SCAF11-207ENST00000484275 RNFT1Q5M7Z0 435 aa10.61□□□□□ -0.71
SCAF11-207ENST00000484275 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
SCAF11-207ENST00000484275 VWA5B2Q8N398 1253 aa10.61□□□□□ -0.71
SCAF11-207ENST00000484275 COL25A1Q9BXS0 654 aaPredicted RBP10.61□□□□□ -0.71
SCAF11-207ENST00000484275 TBC1D2BQ9UPU7 963 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms