RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-222ENST00000483882 PARD3Q8TEW0 1356 aa20.85■□□□□ 0.93
NR1H3-222ENST00000483882 C11orf95C9JLR9 678 aaPredicted RBP20.83■□□□□ 0.93
NR1H3-222ENST00000483882 KCNH5Q8NCM2 988 aa20.83■□□□□ 0.93
NR1H3-222ENST00000483882 PARP4Q9UKK3 1724 aaKnown RBP20.83■□□□□ 0.92
NR1H3-222ENST00000483882 TTC21AQ8NDW8 1320 aa20.82■□□□□ 0.92
NR1H3-222ENST00000483882 CPSF1Q10570 1443 aaKnown RBP20.82■□□□□ 0.92
NR1H3-222ENST00000483882 AXIN2Q9Y2T1 843 aa20.82■□□□□ 0.92
NR1H3-222ENST00000483882 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
NR1H3-222ENST00000483882 TMF1P82094 1093 aa20.81■□□□□ 0.92
NR1H3-222ENST00000483882 DDB1Q16531 1140 aa20.81■□□□□ 0.92
NR1H3-222ENST00000483882 PUS7Q96PZ0 661 aaKnown RBP20.81■□□□□ 0.92
NR1H3-222ENST00000483882 AKAP12Q02952 1782 aa20.81■□□□□ 0.92
NR1H3-222ENST00000483882 WDR17Q8IZU2 1322 aa20.8■□□□□ 0.92
NR1H3-222ENST00000483882 CSB-PGBD3P0DP91 1061 aa20.8■□□□□ 0.92
NR1H3-222ENST00000483882 ARHGEF25Q86VW2 580 aa20.8■□□□□ 0.92
NR1H3-222ENST00000483882 COL18A1P39060 1754 aa20.8■□□□□ 0.92
NR1H3-222ENST00000483882 OVOS2A0A0G2JMS6 1433 aa20.79■□□□□ 0.92
NR1H3-222ENST00000483882 OVOS2A0A0J9YW53 1432 aa20.79■□□□□ 0.92
NR1H3-222ENST00000483882 OVOS2Q6IE36 1432 aa20.79■□□□□ 0.92
NR1H3-222ENST00000483882 SLC24A1O60721 1099 aa20.78■□□□□ 0.92
NR1H3-222ENST00000483882 NBPF14Q5TI25 921 aa20.78■□□□□ 0.92
NR1H3-222ENST00000483882 LRRC37A3O60309 1634 aa20.78■□□□□ 0.92
NR1H3-222ENST00000483882 RREB1Q92766 1687 aa20.77■□□□□ 0.92
NR1H3-222ENST00000483882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.77■□□□□ 0.92
NR1H3-222ENST00000483882 TMC1Q8TDI8 760 aa20.77■□□□□ 0.92
NR1H3-222ENST00000483882 NUP188Q5SRE5 1749 aa20.75■□□□□ 0.91
NR1H3-222ENST00000483882 CDCA7Q9BWT1 371 aaPredicted RBP20.75■□□□□ 0.91
NR1H3-222ENST00000483882 SLC12A5Q9H2X9 1139 aa20.75■□□□□ 0.91
NR1H3-222ENST00000483882 NFAT5O94916 1531 aa20.74■□□□□ 0.91
NR1H3-222ENST00000483882 CARD10Q9BWT7 1032 aa20.74■□□□□ 0.91
NR1H3-222ENST00000483882 PEAK1Q9H792 1746 aa20.74■□□□□ 0.91
NR1H3-222ENST00000483882 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
NR1H3-222ENST00000483882 CD163L1Q9NR16 1453 aa20.73■□□□□ 0.91
NR1H3-222ENST00000483882 WNK3Q9BYP7 1800 aa20.72■□□□□ 0.91
NR1H3-222ENST00000483882 HDGFL2Q7Z4V5 671 aaPredicted RBP20.72■□□□□ 0.91
NR1H3-222ENST00000483882 NME9Q86XW9 330 aa20.72■□□□□ 0.91
NR1H3-222ENST00000483882 MARCH10Q8NA82 808 aaPredicted RBP20.72■□□□□ 0.91
NR1H3-222ENST00000483882 RGPD5Q99666 1765 aa20.72■□□□□ 0.91
NR1H3-222ENST00000483882 KIF7Q2M1P5 1343 aa20.71■□□□□ 0.91
NR1H3-222ENST00000483882 USP31Q70CQ4 1352 aa20.71■□□□□ 0.91
NR1H3-222ENST00000483882 CDCA8Q53HL2 280 aa20.7■□□□□ 0.9
NR1H3-222ENST00000483882 BCL11BQ9C0K0 894 aaPredicted RBP20.7■□□□□ 0.9
NR1H3-222ENST00000483882 PTF1AQ7RTS3 328 aa20.69■□□□□ 0.9
NR1H3-222ENST00000483882 CCDC7Q96M83 1385 aa20.69■□□□□ 0.9
NR1H3-222ENST00000483882 EXOC5O00471 708 aa20.68■□□□□ 0.9
NR1H3-222ENST00000483882 PLSCR1O15162 318 aa20.68■□□□□ 0.9
NR1H3-222ENST00000483882 ABCC6O95255 1503 aa20.68■□□□□ 0.9
NR1H3-222ENST00000483882 SBF2Q86WG5 1849 aa20.67■□□□□ 0.9
NR1H3-222ENST00000483882 POLR3GLQ9BT43 218 aa20.67■□□□□ 0.9
NR1H3-222ENST00000483882 TERF2IPQ9NYB0 399 aa20.67■□□□□ 0.9
NR1H3-222ENST00000483882 WASHC2AQ641Q2 1341 aa20.67■□□□□ 0.9
NR1H3-222ENST00000483882 NLRP2Q9NX02 1062 aa20.66■□□□□ 0.9
NR1H3-222ENST00000483882 EDC4Q6P2E9 1401 aaKnown RBP20.66■□□□□ 0.9
NR1H3-222ENST00000483882 MYOM1P52179 1685 aa20.65■□□□□ 0.9
NR1H3-222ENST00000483882 A0A1W2PP64 1363 aa20.65■□□□□ 0.9
NR1H3-222ENST00000483882 NINLQ9Y2I6 1382 aa20.65■□□□□ 0.9
NR1H3-222ENST00000483882 BCL9O00512 1426 aa20.64■□□□□ 0.89
NR1H3-222ENST00000483882 ERBB3P21860 1342 aa20.64■□□□□ 0.89
NR1H3-222ENST00000483882 RGPD3A6NKT7 1758 aaPredicted RBP20.64■□□□□ 0.89
NR1H3-222ENST00000483882 RGPD4Q7Z3J3 1758 aa20.64■□□□□ 0.89
NR1H3-222ENST00000483882 USP54Q70EL1 1684 aa20.64■□□□□ 0.89
NR1H3-222ENST00000483882 TNS2Q63HR2 1409 aa20.63■□□□□ 0.89
NR1H3-222ENST00000483882 SPON1Q9HCB6 807 aa20.63■□□□□ 0.89
NR1H3-222ENST00000483882 PPP1R1BQ9UD71 204 aaPredicted RBP20.63■□□□□ 0.89
NR1H3-222ENST00000483882 ANKRD36BQ8N2N9 1353 aa20.62■□□□□ 0.89
NR1H3-222ENST00000483882 KCNQ2O43526 872 aa20.62■□□□□ 0.89
NR1H3-222ENST00000483882 ANKRD24Q8TF21 1146 aa20.62■□□□□ 0.89
NR1H3-222ENST00000483882 ANO8Q9HCE9 1232 aaPredicted RBP20.62■□□□□ 0.89
NR1H3-222ENST00000483882 CARD14Q9BXL6 1004 aa20.61■□□□□ 0.89
NR1H3-222ENST00000483882 LTN1O94822 1766 aa20.61■□□□□ 0.89
NR1H3-222ENST00000483882 IL2RBP14784 551 aa20.6■□□□□ 0.89
NR1H3-222ENST00000483882 PROM2Q8N271 834 aa20.6■□□□□ 0.89
NR1H3-222ENST00000483882 ACSBG1Q96GR2 724 aa20.59■□□□□ 0.89
NR1H3-222ENST00000483882 TXNRD1Q16881 649 aa20.58■□□□□ 0.89
NR1H3-222ENST00000483882 LTV1Q96GA3 475 aaPredicted RBP20.57■□□□□ 0.88
NR1H3-222ENST00000483882 PANK3Q9H999 370 aa20.57■□□□□ 0.88
NR1H3-222ENST00000483882 STK32BQ9NY57 414 aa20.57■□□□□ 0.88
NR1H3-222ENST00000483882 IP6K1Q92551 441 aa20.55■□□□□ 0.88
NR1H3-222ENST00000483882 COG3Q96JB2 828 aa20.55■□□□□ 0.88
NR1H3-222ENST00000483882 PDGFDQ9GZP0 370 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-222ENST00000483882 ZBTB7AO95365 584 aa20.53■□□□□ 0.88
NR1H3-222ENST00000483882 NHSQ6T4R5 1651 aa20.53■□□□□ 0.88
NR1H3-222ENST00000483882 CASZ1Q86V15 1759 aa20.52■□□□□ 0.88
NR1H3-222ENST00000483882 NSD3Q9BZ95 1437 aa20.52■□□□□ 0.87
NR1H3-222ENST00000483882 AMPHP49418 695 aa20.51■□□□□ 0.87
NR1H3-222ENST00000483882 SLC15A2Q16348 729 aa20.51■□□□□ 0.87
NR1H3-222ENST00000483882 MAP3K19Q56UN5 1328 aa20.51■□□□□ 0.87
NR1H3-222ENST00000483882 DCAF8L1A6NGE4 600 aa20.5■□□□□ 0.87
NR1H3-222ENST00000483882 FBLN1P23142 703 aa20.5■□□□□ 0.87
NR1H3-222ENST00000483882 FYB1O15117 783 aa20.49■□□□□ 0.87
NR1H3-222ENST00000483882 PER1O15534 1290 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-222ENST00000483882 DDX54Q8TDD1 881 aaKnown RBP20.49■□□□□ 0.87
NR1H3-222ENST00000483882 ATF5Q9Y2D1 282 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-222ENST00000483882 HOXC9P31274 260 aa20.48■□□□□ 0.87
NR1H3-222ENST00000483882 FAM208AQ9UK61 1670 aaKnown RBP20.46■□□□□ 0.87
NR1H3-222ENST00000483882 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
NR1H3-222ENST00000483882 YY1P25490 414 aa20.45■□□□□ 0.86
NR1H3-222ENST00000483882 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
NR1H3-222ENST00000483882 BTAF1O14981 1849 aa20.45■□□□□ 0.86
NR1H3-222ENST00000483882 PTGER2P43116 358 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms