RNA–Protein interactions for RNA: ENST00000483814.1

PKD1-217, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-217ENST00000483814 USP35Q9P2H5 1018 aa26.46■■□□□ 1.83
PKD1-217ENST00000483814 SPATA31A1Q5TZJ5 1347 aa26.45■■□□□ 1.83
PKD1-217ENST00000483814 UPF1Q92900 1129 aaKnown RBP eCLIP26.44■■□□□ 1.82
PKD1-217ENST00000483814 ONECUT3O60422 494 aaPredicted RBP26.43■■□□□ 1.82
PKD1-217ENST00000483814 COG3Q96JB2 828 aa26.43■■□□□ 1.82
PKD1-217ENST00000483814 AXIN2Q9Y2T1 843 aa26.43■■□□□ 1.82
PKD1-217ENST00000483814 NSD3Q9BZ95 1437 aa26.4■■□□□ 1.82
PKD1-217ENST00000483814 CARD14Q9BXL6 1004 aa26.4■■□□□ 1.82
PKD1-217ENST00000483814 GGNBP2Q9H3C7 697 aa26.4■■□□□ 1.82
PKD1-217ENST00000483814 THSD7AQ9UPZ6 1657 aa26.4■■□□□ 1.82
PKD1-217ENST00000483814 C11orf95C9JLR9 678 aaPredicted RBP26.39■■□□□ 1.82
PKD1-217ENST00000483814 FYB1O15117 783 aa26.39■■□□□ 1.82
PKD1-217ENST00000483814 CRB1P82279 1406 aa26.38■■□□□ 1.81
PKD1-217ENST00000483814 TOM1L2Q6ZVM7 507 aa26.37■■□□□ 1.81
PKD1-217ENST00000483814 ABCC6O95255 1503 aa26.37■■□□□ 1.81
PKD1-217ENST00000483814 CSB-PGBD3P0DP91 1061 aa26.36■■□□□ 1.81
PKD1-217ENST00000483814 KRT27Q7Z3Y8 459 aa26.36■■□□□ 1.81
PKD1-217ENST00000483814 TCP11L2Q8N4U5 519 aa26.36■■□□□ 1.81
PKD1-217ENST00000483814 WDR17Q8IZU2 1322 aa26.35■■□□□ 1.81
PKD1-217ENST00000483814 EP400Q96L91 3159 aa26.34■■□□□ 1.81
PKD1-217ENST00000483814 FBLN1P23142 703 aa26.33■■□□□ 1.81
PKD1-217ENST00000483814 BARGINQ6ZT62 677 aa26.32■■□□□ 1.8
PKD1-217ENST00000483814 THRAP3Q9Y2W1 955 aaKnown RBP26.32■■□□□ 1.8
PKD1-217ENST00000483814 WNK3Q9BYP7 1800 aa26.31■■□□□ 1.8
PKD1-217ENST00000483814 PANK3Q9H999 370 aa26.3■■□□□ 1.8
PKD1-217ENST00000483814 CGNL1Q0VF96 1302 aa26.29■■□□□ 1.8
PKD1-217ENST00000483814 KIF7Q2M1P5 1343 aa26.29■■□□□ 1.8
PKD1-217ENST00000483814 MAP3K19Q56UN5 1328 aa26.29■■□□□ 1.8
PKD1-217ENST00000483814 FAM182BQ5T319 152 aa26.28■■□□□ 1.8
PKD1-217ENST00000483814 PARP4Q9UKK3 1724 aaKnown RBP26.28■■□□□ 1.8
PKD1-217ENST00000483814 AMPHP49418 695 aa26.27■■□□□ 1.8
PKD1-217ENST00000483814 RRS1Q15050 365 aaKnown RBP26.27■■□□□ 1.8
PKD1-217ENST00000483814 IP6K1Q92551 441 aa26.27■■□□□ 1.8
PKD1-217ENST00000483814 ERBB3P21860 1342 aa26.27■■□□□ 1.8
PKD1-217ENST00000483814 BLMP54132 1417 aaPredicted RBP26.26■■□□□ 1.79
PKD1-217ENST00000483814 ANKRD24Q8TF21 1146 aa26.26■■□□□ 1.79
PKD1-217ENST00000483814 CARD10Q9BWT7 1032 aa26.26■■□□□ 1.79
PKD1-217ENST00000483814 ANKRD26Q9UPS8 1709 aa26.25■■□□□ 1.79
PKD1-217ENST00000483814 LTV1Q96GA3 475 aaPredicted RBP26.25■■□□□ 1.79
PKD1-217ENST00000483814 PDE3BQ13370 1112 aa26.24■■□□□ 1.79
PKD1-217ENST00000483814 NLRP2Q9NX02 1062 aa26.24■■□□□ 1.79
PKD1-217ENST00000483814 HOXC9P31274 260 aa26.23■■□□□ 1.79
PKD1-217ENST00000483814 LRRC37A3O60309 1634 aa26.22■■□□□ 1.79
PKD1-217ENST00000483814 FAM208AQ9UK61 1670 aaKnown RBP26.22■■□□□ 1.79
PKD1-217ENST00000483814 CCDC7Q96M83 1385 aa26.21■■□□□ 1.79
PKD1-217ENST00000483814 MAP2P11137 1827 aaKnown RBP26.21■■□□□ 1.79
PKD1-217ENST00000483814 CCDC125Q86Z20 511 aa26.21■■□□□ 1.79
PKD1-217ENST00000483814 RGPD2P0DJD1 1756 aa26.2■■□□□ 1.79
PKD1-217ENST00000483814 PEAK1Q9H792 1746 aa26.2■■□□□ 1.79
PKD1-217ENST00000483814 RTL1A6NKG5 1358 aa26.2■■□□□ 1.78
PKD1-217ENST00000483814 SF3B2Q13435 895 aaKnown RBP26.18■■□□□ 1.78
PKD1-217ENST00000483814 DDB1Q16531 1140 aa26.18■■□□□ 1.78
PKD1-217ENST00000483814 CDCA7Q9BWT1 371 aaPredicted RBP26.17■■□□□ 1.78
PKD1-217ENST00000483814 RGPD1P0DJD0 1748 aa26.17■■□□□ 1.78
PKD1-217ENST00000483814 DISP2A7MBM2 1401 aa26.16■■□□□ 1.78
PKD1-217ENST00000483814 TNNT2P45379 298 aaPredicted RBP26.16■■□□□ 1.78
PKD1-217ENST00000483814 KNSTRNQ9Y448 316 aa26.16■■□□□ 1.78
PKD1-217ENST00000483814 EMILIN1Q9Y6C2 1016 aa26.16■■□□□ 1.78
PKD1-217ENST00000483814 WASHC2AQ641Q2 1341 aa26.15■■□□□ 1.78
PKD1-217ENST00000483814 FAM196AQ6ZSG2 479 aa26.15■■□□□ 1.78
PKD1-217ENST00000483814 PPM1GO15355 546 aaPredicted RBP26.14■■□□□ 1.78
PKD1-217ENST00000483814 FLT4P35916 1363 aa26.14■■□□□ 1.78
PKD1-217ENST00000483814 NSD2O96028 1365 aa26.13■■□□□ 1.77
PKD1-217ENST00000483814 HSP90AB2PQ58FF8 381 aa26.13■■□□□ 1.77
PKD1-217ENST00000483814 SMG6Q86US8 1419 aaKnown RBP26.13■■□□□ 1.77
PKD1-217ENST00000483814 INSRP06213 1382 aa26.11■■□□□ 1.77
PKD1-217ENST00000483814 KIF24Q5T7B8 1368 aa26.11■■□□□ 1.77
PKD1-217ENST00000483814 DEFB132Q7Z7B7 95 aa26.11■■□□□ 1.77
PKD1-217ENST00000483814 TNS1Q9HBL0 1735 aaKnown RBP26.11■■□□□ 1.77
PKD1-217ENST00000483814 EXOC5O00471 708 aa26.1■■□□□ 1.77
PKD1-217ENST00000483814 IL2RBP14784 551 aa26.1■■□□□ 1.77
PKD1-217ENST00000483814 OVOS2A0A0G2JMS6 1433 aa26.09■■□□□ 1.77
PKD1-217ENST00000483814 TRIM37O94972 964 aa26.09■■□□□ 1.77
PKD1-217ENST00000483814 MORC1Q86VD1 984 aa26.08■■□□□ 1.77
PKD1-217ENST00000483814 POLKQ9UBT6 870 aa26.08■■□□□ 1.77
PKD1-217ENST00000483814 SBF2Q86WG5 1849 aa26.08■■□□□ 1.77
PKD1-217ENST00000483814 TNS2Q63HR2 1409 aa26.07■■□□□ 1.76
PKD1-217ENST00000483814 MARCH10Q8NA82 808 aaPredicted RBP26.07■■□□□ 1.76
PKD1-217ENST00000483814 BAG6P46379 1132 aa26.06■■□□□ 1.76
PKD1-217ENST00000483814 AMER1Q5JTC6 1135 aaPredicted RBP26.05■■□□□ 1.76
PKD1-217ENST00000483814 NBPF6Q5VWK0 638 aa26.05■■□□□ 1.76
PKD1-217ENST00000483814 USHBP1Q8N6Y0 703 aa26.05■■□□□ 1.76
PKD1-217ENST00000483814 NBPF4Q96M43 638 aa26.05■■□□□ 1.76
PKD1-217ENST00000483814 KAT6BQ8WYB5 2073 aa26.02■■□□□ 1.76
PKD1-217ENST00000483814 PER1O15534 1290 aaPredicted RBP26.02■■□□□ 1.76
PKD1-217ENST00000483814 EN1Q05925 392 aaPredicted RBP26.01■■□□□ 1.75
PKD1-217ENST00000483814 CNGB1Q14028 1251 aaPredicted RBP26.01■■□□□ 1.75
PKD1-217ENST00000483814 MEGF6O75095 1541 aa26■■□□□ 1.75
PKD1-217ENST00000483814 CC2D1BQ5T0F9 858 aaKnown RBP26■■□□□ 1.75
PKD1-217ENST00000483814 APBA3O96018 575 aa25.99■■□□□ 1.75
PKD1-217ENST00000483814 RAPGEF4Q8WZA2 1011 aa25.97■■□□□ 1.75
PKD1-217ENST00000483814 SHANK3Q9BYB0 1731 aa25.97■■□□□ 1.75
PKD1-217ENST00000483814 DDX54Q8TDD1 881 aaKnown RBP25.96■■□□□ 1.75
PKD1-217ENST00000483814 BCL9O00512 1426 aa25.95■■□□□ 1.74
PKD1-217ENST00000483814 TATP17735 454 aaPredicted RBP25.94■■□□□ 1.74
PKD1-217ENST00000483814 EIF4A2Q14240 407 aaKnown RBP25.94■■□□□ 1.74
PKD1-217ENST00000483814 EZH2Q15910 746 aaKnown RBP25.93■■□□□ 1.74
PKD1-217ENST00000483814 PTF1AQ7RTS3 328 aa25.93■■□□□ 1.74
PKD1-217ENST00000483814 ZCRB1Q8TBF4 217 aaKnown RBP25.93■■□□□ 1.74
PKD1-217ENST00000483814 EYA1Q99502 592 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms