RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 CARD14Q9BXL6 1004 aa8.66□□□□□ -1.02
NSMCE4A-210ENST00000483541 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
NSMCE4A-210ENST00000483541 ZBTB33Q86T24 672 aa8.65□□□□□ -1.02
NSMCE4A-210ENST00000483541 ZSCAN1Q8NBB4 408 aa8.65□□□□□ -1.02
NSMCE4A-210ENST00000483541 ZIC2O95409 532 aaPredicted RBP8.64□□□□□ -1.03
NSMCE4A-210ENST00000483541 BMP1P13497 986 aa8.64□□□□□ -1.03
NSMCE4A-210ENST00000483541 SCARF1Q14162 830 aa8.64□□□□□ -1.03
NSMCE4A-210ENST00000483541 MRPL14Q6P1L8 145 aaKnown RBP8.64□□□□□ -1.03
NSMCE4A-210ENST00000483541 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
NSMCE4A-210ENST00000483541 FSHRP23945 695 aa8.63□□□□□ -1.03
NSMCE4A-210ENST00000483541 BANK1Q8NDB2 785 aa8.63□□□□□ -1.03
NSMCE4A-210ENST00000483541 ITPKCQ96DU7 683 aa8.63□□□□□ -1.03
NSMCE4A-210ENST00000483541 SLC10A4Q96EP9 437 aa8.63□□□□□ -1.03
NSMCE4A-210ENST00000483541 NXF1Q9UBU9 619 aaKnown RBP8.63□□□□□ -1.03
NSMCE4A-210ENST00000483541 EMILIN1Q9Y6C2 1016 aa8.63□□□□□ -1.03
NSMCE4A-210ENST00000483541 SOCS7O14512 581 aa8.62□□□□□ -1.03
NSMCE4A-210ENST00000483541 CCDC116Q8IYX3 515 aa8.62□□□□□ -1.03
NSMCE4A-210ENST00000483541 ZFP42Q96MM3 310 aa8.62□□□□□ -1.03
NSMCE4A-210ENST00000483541 OCSTAMPQ9BR26 566 aa8.62□□□□□ -1.03
NSMCE4A-210ENST00000483541 TRIM34Q9BYJ4 488 aa8.62□□□□□ -1.03
NSMCE4A-210ENST00000483541 GMPRP36959 345 aa8.61□□□□□ -1.03
NSMCE4A-210ENST00000483541 ADAM32Q8TC27 787 aa8.61□□□□□ -1.03
NSMCE4A-210ENST00000483541 IRF7Q92985 503 aa8.61□□□□□ -1.03
NSMCE4A-210ENST00000483541 KCTD15Q96SI1 283 aaPredicted RBP8.61□□□□□ -1.03
NSMCE4A-210ENST00000483541 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
NSMCE4A-210ENST00000483541 DHX9Q08211 1270 aaKnown RBP8.59□□□□□ -1.03
NSMCE4A-210ENST00000483541 GJD4Q96KN9 370 aaPredicted RBP8.59□□□□□ -1.03
NSMCE4A-210ENST00000483541 PGPEP1Q9NXJ5 209 aa8.59□□□□□ -1.03
NSMCE4A-210ENST00000483541 UPP2O95045 317 aa8.58□□□□□ -1.04
NSMCE4A-210ENST00000483541 NBPF20Q3BBV1 942 aa8.58□□□□□ -1.04
NSMCE4A-210ENST00000483541 PPP1R26Q5T8A7 1209 aaPredicted RBP8.58□□□□□ -1.04
NSMCE4A-210ENST00000483541 MEIOBQ8N635 442 aa8.58□□□□□ -1.04
NSMCE4A-210ENST00000483541 PURBQ96QR8 312 aaKnown RBP8.57□□□□□ -1.04
NSMCE4A-210ENST00000483541 TSEN34Q9BSV6 310 aaKnown RBP8.57□□□□□ -1.04
NSMCE4A-210ENST00000483541 APBB1O00213 710 aa8.56□□□□□ -1.04
NSMCE4A-210ENST00000483541 DZIP3Q86Y13 1208 aaKnown RBP8.56□□□□□ -1.04
NSMCE4A-210ENST00000483541 ZBBXA8MT70 800 aa8.55□□□□□ -1.04
NSMCE4A-210ENST00000483541 H3BM21 787 aa8.55□□□□□ -1.04
NSMCE4A-210ENST00000483541 INTS6LQ5JSJ4 861 aaKnown RBP8.55□□□□□ -1.04
NSMCE4A-210ENST00000483541 Q6ZVU0 165 aa8.55□□□□□ -1.04
NSMCE4A-210ENST00000483541 LINC00528Q8N1L1 170 aa8.55□□□□□ -1.04
NSMCE4A-210ENST00000483541 BMP2P12643 396 aa8.54□□□□□ -1.04
NSMCE4A-210ENST00000483541 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
NSMCE4A-210ENST00000483541 TRIM52Q96A61 297 aa8.54□□□□□ -1.04
NSMCE4A-210ENST00000483541 ESPNB1AK53 854 aa8.53□□□□□ -1.04
NSMCE4A-210ENST00000483541 MCCD1P59942 119 aaPredicted RBP8.53□□□□□ -1.04
NSMCE4A-210ENST00000483541 SEPT12Q8IYM1 358 aa8.53□□□□□ -1.04
NSMCE4A-210ENST00000483541 C6orf118Q5T5N4 469 aa8.52□□□□□ -1.05
NSMCE4A-210ENST00000483541 CCDC125Q86Z20 511 aa8.52□□□□□ -1.05
NSMCE4A-210ENST00000483541 MTMR14Q8NCE2 650 aa8.52□□□□□ -1.05
NSMCE4A-210ENST00000483541 ZNF592Q92610 1267 aa8.52□□□□□ -1.05
NSMCE4A-210ENST00000483541 MAN1A2O60476 641 aa8.51□□□□□ -1.05
NSMCE4A-210ENST00000483541 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
NSMCE4A-210ENST00000483541 NDUFB9Q9Y6M9 179 aa8.51□□□□□ -1.05
NSMCE4A-210ENST00000483541 FBXO45P0C2W1 286 aa8.5□□□□□ -1.05
NSMCE4A-210ENST00000483541 SNRKQ9NRH2 765 aa8.5□□□□□ -1.05
NSMCE4A-210ENST00000483541 SOS2Q07890 1332 aaPredicted RBP8.5□□□□□ -1.05
NSMCE4A-210ENST00000483541 ERBB4Q15303 1308 aa8.5□□□□□ -1.05
NSMCE4A-210ENST00000483541 NR1H3Q13133 447 aa8.49□□□□□ -1.05
NSMCE4A-210ENST00000483541 CBLBQ13191 982 aa8.49□□□□□ -1.05
NSMCE4A-210ENST00000483541 ZNF330Q9Y3S2 320 aaPredicted RBP8.49□□□□□ -1.05
NSMCE4A-210ENST00000483541 ERVH48-1M5A8F1 160 aa8.48□□□□□ -1.05
NSMCE4A-210ENST00000483541 SPINT1O43278 529 aa8.48□□□□□ -1.05
NSMCE4A-210ENST00000483541 GPR37L1O60883 481 aa8.47□□□□□ -1.05
NSMCE4A-210ENST00000483541 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
NSMCE4A-210ENST00000483541 PCDHB9Q9Y5E1 797 aa8.47□□□□□ -1.05
NSMCE4A-210ENST00000483541 TTLL8A6PVC2 850 aa8.46□□□□□ -1.06
NSMCE4A-210ENST00000483541 LILRA1O75019 489 aa8.46□□□□□ -1.06
NSMCE4A-210ENST00000483541 KCNMA1Q12791 1236 aa8.46□□□□□ -1.06
NSMCE4A-210ENST00000483541 RNF20Q5VTR2 975 aa8.46□□□□□ -1.06
NSMCE4A-210ENST00000483541 ZNF784Q8NCA9 323 aaPredicted RBP8.46□□□□□ -1.06
NSMCE4A-210ENST00000483541 TMPRSS4Q9NRS4 437 aa8.46□□□□□ -1.06
NSMCE4A-210ENST00000483541 SOBPA7XYQ1 873 aa8.45□□□□□ -1.06
NSMCE4A-210ENST00000483541 GIGYF1O75420 1035 aaPredicted RBP8.45□□□□□ -1.06
NSMCE4A-210ENST00000483541 VSIG8P0DPA2 414 aa8.45□□□□□ -1.06
NSMCE4A-210ENST00000483541 VEGFBP49765 207 aa8.45□□□□□ -1.06
NSMCE4A-210ENST00000483541 RAB15P59190 212 aa8.45□□□□□ -1.06
NSMCE4A-210ENST00000483541 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.45□□□□□ -1.063e-9■□□□□ 11.3
NSMCE4A-210ENST00000483541 DNMT3LQ9UJW3 386 aa8.45□□□□□ -1.06
NSMCE4A-210ENST00000483541 ADH1AP07327 375 aa8.44□□□□□ -1.06
NSMCE4A-210ENST00000483541 ADD1P35611 737 aaKnown RBP8.43□□□□□ -1.06
NSMCE4A-210ENST00000483541 GSK3AP49840 483 aa8.42□□□□□ -1.06
NSMCE4A-210ENST00000483541 RELBQ01201 579 aa8.42□□□□□ -1.06
NSMCE4A-210ENST00000483541 AGBL1Q96MI9 1066 aa8.42□□□□□ -1.06
NSMCE4A-210ENST00000483541 PTGIRP43119 386 aa8.41□□□□□ -1.06
NSMCE4A-210ENST00000483541 KDF1Q8NAX2 398 aaPredicted RBP8.41□□□□□ -1.06
NSMCE4A-210ENST00000483541 PPFIA3O75145 1194 aa8.4□□□□□ -1.06
NSMCE4A-210ENST00000483541 INSM2Q96T92 566 aaPredicted RBP8.4□□□□□ -1.06
NSMCE4A-210ENST00000483541 CYLDQ9NQC7 956 aa8.4□□□□□ -1.06
NSMCE4A-210ENST00000483541 FIGNL2A6NMB9 653 aa8.39□□□□□ -1.07
NSMCE4A-210ENST00000483541 CTSOP43234 321 aaPredicted RBP8.39□□□□□ -1.07
NSMCE4A-210ENST00000483541 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
NSMCE4A-210ENST00000483541 ZNF395Q9H8N7 513 aaPredicted RBP8.39□□□□□ -1.07
NSMCE4A-210ENST00000483541 TBC1D2BQ9UPU7 963 aa8.39□□□□□ -1.07
NSMCE4A-210ENST00000483541 PTSQ03393 145 aa8.38□□□□□ -1.07
NSMCE4A-210ENST00000483541 CC2D2BQ6DHV5 1058 aa8.38□□□□□ -1.07
NSMCE4A-210ENST00000483541 EIF4G2P78344 907 aaKnown RBP eCLIP8.37□□□□□ -1.07
NSMCE4A-210ENST00000483541 RNF217Q8TC41 542 aa8.37□□□□□ -1.07
NSMCE4A-210ENST00000483541 POLMQ9NP87 494 aaPredicted RBP8.37□□□□□ -1.07
NSMCE4A-210ENST00000483541 CEP126Q9P2H0 1117 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms