RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 TIMELESSQ9UNS1 1208 aa30.2■■■□□ 2.43
SYPL1-206ENST00000483448 USP47Q96K76 1375 aa30.19■■■□□ 2.42
SYPL1-206ENST00000483448 TMF1P82094 1093 aa30.19■■■□□ 2.42
SYPL1-206ENST00000483448 EN1Q05925 392 aaPredicted RBP30.19■■■□□ 2.42
SYPL1-206ENST00000483448 WDR17Q8IZU2 1322 aa30.19■■■□□ 2.42
SYPL1-206ENST00000483448 A0A1W2PP64 1363 aa30.18■■■□□ 2.42
SYPL1-206ENST00000483448 USP31Q70CQ4 1352 aa30.18■■■□□ 2.42
SYPL1-206ENST00000483448 EDC4Q6P2E9 1401 aaKnown RBP30.18■■■□□ 2.42
SYPL1-206ENST00000483448 CLSPNQ9HAW4 1339 aa30.18■■■□□ 2.42
SYPL1-206ENST00000483448 NINLQ9Y2I6 1382 aa30.15■■■□□ 2.42
SYPL1-206ENST00000483448 COL18A1P39060 1754 aa30.15■■■□□ 2.42
SYPL1-206ENST00000483448 APBA3O96018 575 aa30.13■■■□□ 2.41
SYPL1-206ENST00000483448 NFAT5O94916 1531 aa30.12■■■□□ 2.41
SYPL1-206ENST00000483448 DDB1Q16531 1140 aa30.12■■■□□ 2.41
SYPL1-206ENST00000483448 CCER1Q8TC90 406 aaPredicted RBP30.12■■■□□ 2.41
SYPL1-206ENST00000483448 CARD10Q9BWT7 1032 aa30.12■■■□□ 2.41
SYPL1-206ENST00000483448 RGPD1P0DJD0 1748 aa30.12■■■□□ 2.41
SYPL1-206ENST00000483448 CDCA8Q53HL2 280 aa30.09■■■□□ 2.41
SYPL1-206ENST00000483448 EZH2Q15910 746 aaKnown RBP30.08■■■□□ 2.41
SYPL1-206ENST00000483448 CDCA7Q9BWT1 371 aaPredicted RBP30.08■■■□□ 2.41
SYPL1-206ENST00000483448 C11orf95C9JLR9 678 aaPredicted RBP30.07■■■□□ 2.4
SYPL1-206ENST00000483448 COG3Q96JB2 828 aa30.07■■■□□ 2.4
SYPL1-206ENST00000483448 RGPD5Q99666 1765 aa30.07■■■□□ 2.4
SYPL1-206ENST00000483448 NLRP2Q9NX02 1062 aa30.06■■■□□ 2.4
SYPL1-206ENST00000483448 PSDA5PKW4 1024 aaPredicted RBP30.04■■■□□ 2.4
SYPL1-206ENST00000483448 PARP4Q9UKK3 1724 aaKnown RBP30.04■■■□□ 2.4
SYPL1-206ENST00000483448 ANKRD36BQ8N2N9 1353 aa30.03■■■□□ 2.4
SYPL1-206ENST00000483448 EXOC5O00471 708 aa30.03■■■□□ 2.4
SYPL1-206ENST00000483448 ANKRD24Q8TF21 1146 aa30.03■■■□□ 2.4
SYPL1-206ENST00000483448 CAMKK2Q96RR4 588 aa30.03■■■□□ 2.4
SYPL1-206ENST00000483448 DISP2A7MBM2 1401 aa30.02■■■□□ 2.4
SYPL1-206ENST00000483448 CCDC7Q96M83 1385 aa30.02■■■□□ 2.4
SYPL1-206ENST00000483448 OVOS2A0A0J9YW53 1432 aa30.01■■■□□ 2.39
SYPL1-206ENST00000483448 OVOS2Q6IE36 1432 aa30.01■■■□□ 2.39
SYPL1-206ENST00000483448 TNS1Q9HBL0 1735 aaKnown RBP30.01■■■□□ 2.39
SYPL1-206ENST00000483448 ABCC6O95255 1503 aa30.01■■■□□ 2.39
SYPL1-206ENST00000483448 USP54Q70EL1 1684 aa30.01■■■□□ 2.39
SYPL1-206ENST00000483448 OVOS2A0A0G2JMS6 1433 aa30■■■□□ 2.39
SYPL1-206ENST00000483448 ERBB3P21860 1342 aa29.99■■■□□ 2.39
SYPL1-206ENST00000483448 MARCH10Q8NA82 808 aaPredicted RBP29.98■■■□□ 2.39
SYPL1-206ENST00000483448 LTV1Q96GA3 475 aaPredicted RBP29.98■■■□□ 2.39
SYPL1-206ENST00000483448 IP6K1Q92551 441 aa29.97■■■□□ 2.39
SYPL1-206ENST00000483448 LTN1O94822 1766 aa29.96■■■□□ 2.39
SYPL1-206ENST00000483448 FBLN1P23142 703 aa29.96■■■□□ 2.39
SYPL1-206ENST00000483448 AMPHP49418 695 aa29.96■■■□□ 2.39
SYPL1-206ENST00000483448 R3HDM1Q15032 1099 aaKnown RBP29.96■■■□□ 2.39
SYPL1-206ENST00000483448 GGNBP2Q9H3C7 697 aa29.96■■■□□ 2.39
SYPL1-206ENST00000483448 LRRC37A3O60309 1634 aa29.96■■■□□ 2.39
SYPL1-206ENST00000483448 PARD3Q8TEW0 1356 aa29.94■■■□□ 2.38
SYPL1-206ENST00000483448 FYB1O15117 783 aa29.94■■■□□ 2.38
SYPL1-206ENST00000483448 POLR3GLQ9BT43 218 aa29.94■■■□□ 2.38
SYPL1-206ENST00000483448 IL2RBP14784 551 aa29.92■■■□□ 2.38
SYPL1-206ENST00000483448 MAP3K19Q56UN5 1328 aa29.92■■■□□ 2.38
SYPL1-206ENST00000483448 BCL11BQ9C0K0 894 aaPredicted RBP29.91■■■□□ 2.38
SYPL1-206ENST00000483448 NBPF14Q5TI25 921 aa29.9■■■□□ 2.38
SYPL1-206ENST00000483448 WNK3Q9BYP7 1800 aa29.89■■■□□ 2.38
SYPL1-206ENST00000483448 HOXC9P31274 260 aa29.89■■■□□ 2.38
SYPL1-206ENST00000483448 EIF4G2P78344 907 aaKnown RBP eCLIP29.87■■■□□ 2.37
SYPL1-206ENST00000483448 RRS1Q15050 365 aaKnown RBP29.87■■■□□ 2.37
SYPL1-206ENST00000483448 PTF1AQ7RTS3 328 aa29.87■■■□□ 2.37
SYPL1-206ENST00000483448 PEAK1Q9H792 1746 aa29.87■■■□□ 2.37
SYPL1-206ENST00000483448 SRCAPQ6ZRS2 3230 aa29.86■■■□□ 2.37
SYPL1-206ENST00000483448 CARD14Q9BXL6 1004 aa29.86■■■□□ 2.37
SYPL1-206ENST00000483448 PLSCR1O15162 318 aa29.84■■■□□ 2.37
SYPL1-206ENST00000483448 TNS2Q63HR2 1409 aa29.83■■■□□ 2.37
SYPL1-206ENST00000483448 HSPA5P11021 654 aaKnown RBP29.83■■■□□ 2.37
SYPL1-206ENST00000483448 BCL9O00512 1426 aa29.81■■■□□ 2.36
SYPL1-206ENST00000483448 NSD3Q9BZ95 1437 aa29.81■■■□□ 2.36
SYPL1-206ENST00000483448 ACSBG1Q96GR2 724 aa29.81■■■□□ 2.36
SYPL1-206ENST00000483448 SBF2Q86WG5 1849 aa29.8■■■□□ 2.36
SYPL1-206ENST00000483448 DDX54Q8TDD1 881 aaKnown RBP29.79■■■□□ 2.36
SYPL1-206ENST00000483448 KCNQ2O43526 872 aa29.78■■■□□ 2.36
SYPL1-206ENST00000483448 RTL1A6NKG5 1358 aa29.77■■■□□ 2.36
SYPL1-206ENST00000483448 RREB1Q92766 1687 aa29.76■■■□□ 2.35
SYPL1-206ENST00000483448 MYOM1P52179 1685 aa29.74■■■□□ 2.35
SYPL1-206ENST00000483448 NUP188Q5SRE5 1749 aa29.74■■■□□ 2.35
SYPL1-206ENST00000483448 KIF20BQ96Q89 1820 aa29.73■■■□□ 2.35
SYPL1-206ENST00000483448 CGNL1Q0VF96 1302 aa29.72■■■□□ 2.35
SYPL1-206ENST00000483448 SMG6Q86US8 1419 aaKnown RBP29.72■■■□□ 2.35
SYPL1-206ENST00000483448 PPM1GO15355 546 aaPredicted RBP29.72■■■□□ 2.35
SYPL1-206ENST00000483448 HSP90AB2PQ58FF8 381 aa29.72■■■□□ 2.35
SYPL1-206ENST00000483448 NBPF6Q5VWK0 638 aa29.72■■■□□ 2.35
SYPL1-206ENST00000483448 NBPF4Q96M43 638 aa29.72■■■□□ 2.35
SYPL1-206ENST00000483448 PROM2Q8N271 834 aa29.71■■■□□ 2.35
SYPL1-206ENST00000483448 USHBP1Q8N6Y0 703 aa29.71■■■□□ 2.35
SYPL1-206ENST00000483448 FAM208AQ9UK61 1670 aaKnown RBP29.71■■■□□ 2.35
SYPL1-206ENST00000483448 TXNRD1Q16881 649 aa29.7■■■□□ 2.35
SYPL1-206ENST00000483448 LRP5O75197 1615 aa29.7■■■□□ 2.34
SYPL1-206ENST00000483448 ZCRB1Q8TBF4 217 aaKnown RBP29.69■■■□□ 2.34
SYPL1-206ENST00000483448 INSRP06213 1382 aa29.68■■■□□ 2.34
SYPL1-206ENST00000483448 FLT4P35916 1363 aa29.68■■■□□ 2.34
SYPL1-206ENST00000483448 EMILIN1Q9Y6C2 1016 aa29.68■■■□□ 2.34
SYPL1-206ENST00000483448 RAPGEF4Q8WZA2 1011 aa29.67■■■□□ 2.34
SYPL1-206ENST00000483448 KAT6BQ8WYB5 2073 aa29.65■■■□□ 2.34
SYPL1-206ENST00000483448 PANK3Q9H999 370 aa29.65■■■□□ 2.34
SYPL1-206ENST00000483448 ANO8Q9HCE9 1232 aaPredicted RBP29.65■■■□□ 2.34
SYPL1-206ENST00000483448 KIF24Q5T7B8 1368 aa29.64■■■□□ 2.34
SYPL1-206ENST00000483448 RGPD3A6NKT7 1758 aaPredicted RBP29.64■■■□□ 2.34
SYPL1-206ENST00000483448 RGPD4Q7Z3J3 1758 aa29.64■■■□□ 2.34
SYPL1-206ENST00000483448 TATP17735 454 aaPredicted RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms