RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 CDCA7Q9BWT1 371 aaPredicted RBP18.43■□□□□ 0.54
LRRFIP1-212ENST00000483443 PPP1R1BQ9UD71 204 aaPredicted RBP18.43■□□□□ 0.54
LRRFIP1-212ENST00000483443 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
LRRFIP1-212ENST00000483443 TRPM1Q7Z4N2 1603 aa18.42■□□□□ 0.54
LRRFIP1-212ENST00000483443 CPSF1Q10570 1443 aaKnown RBP18.42■□□□□ 0.54
LRRFIP1-212ENST00000483443 WDR17Q8IZU2 1322 aa18.42■□□□□ 0.54
LRRFIP1-212ENST00000483443 LRRC37A3O60309 1634 aa18.41■□□□□ 0.54
LRRFIP1-212ENST00000483443 PIK3C2AO00443 1686 aa18.41■□□□□ 0.54
LRRFIP1-212ENST00000483443 SPON1Q9HCB6 807 aa18.41■□□□□ 0.54
LRRFIP1-212ENST00000483443 TTC21AQ8NDW8 1320 aa18.41■□□□□ 0.54
LRRFIP1-212ENST00000483443 CSB-PGBD3P0DP91 1061 aa18.4■□□□□ 0.54
LRRFIP1-212ENST00000483443 PLSCR1O15162 318 aa18.39■□□□□ 0.53
LRRFIP1-212ENST00000483443 TTC21BQ7Z4L5 1316 aa18.39■□□□□ 0.53
LRRFIP1-212ENST00000483443 RGPD3A6NKT7 1758 aaPredicted RBP18.38■□□□□ 0.53
LRRFIP1-212ENST00000483443 RGPD4Q7Z3J3 1758 aa18.38■□□□□ 0.53
LRRFIP1-212ENST00000483443 SOX12O15370 315 aa18.38■□□□□ 0.53
LRRFIP1-212ENST00000483443 KCNQ2O43526 872 aa18.38■□□□□ 0.53
LRRFIP1-212ENST00000483443 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
LRRFIP1-212ENST00000483443 BCL11BQ9C0K0 894 aaPredicted RBP18.38■□□□□ 0.53
LRRFIP1-212ENST00000483443 PEAK1Q9H792 1746 aa18.37■□□□□ 0.53
LRRFIP1-212ENST00000483443 AXIN2Q9Y2T1 843 aa18.37■□□□□ 0.53
LRRFIP1-212ENST00000483443 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
LRRFIP1-212ENST00000483443 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
LRRFIP1-212ENST00000483443 CARD10Q9BWT7 1032 aa18.36■□□□□ 0.53
LRRFIP1-212ENST00000483443 NINLQ9Y2I6 1382 aa18.36■□□□□ 0.53
LRRFIP1-212ENST00000483443 BCL9O00512 1426 aa18.35■□□□□ 0.53
LRRFIP1-212ENST00000483443 NEUROD1Q13562 356 aa18.35■□□□□ 0.53
LRRFIP1-212ENST00000483443 COL18A1P39060 1754 aa18.35■□□□□ 0.53
LRRFIP1-212ENST00000483443 CCDC7Q96M83 1385 aa18.34■□□□□ 0.53
LRRFIP1-212ENST00000483443 RNF216Q9NWF9 866 aaPredicted RBP18.34■□□□□ 0.53
LRRFIP1-212ENST00000483443 ABCC6O95255 1503 aa18.33■□□□□ 0.53
LRRFIP1-212ENST00000483443 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.53
LRRFIP1-212ENST00000483443 MARCH10Q8NA82 808 aaPredicted RBP18.33■□□□□ 0.52
LRRFIP1-212ENST00000483443 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.52
LRRFIP1-212ENST00000483443 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
LRRFIP1-212ENST00000483443 EXOC5O00471 708 aa18.32■□□□□ 0.52
LRRFIP1-212ENST00000483443 YY1P25490 414 aa18.32■□□□□ 0.52
LRRFIP1-212ENST00000483443 ANO8Q9HCE9 1232 aaPredicted RBP18.31■□□□□ 0.52
LRRFIP1-212ENST00000483443 NFAT5O94916 1531 aa18.31■□□□□ 0.52
LRRFIP1-212ENST00000483443 SBNO2Q9Y2G9 1366 aa18.3■□□□□ 0.52
LRRFIP1-212ENST00000483443 SBF2Q86WG5 1849 aa18.3■□□□□ 0.52
LRRFIP1-212ENST00000483443 TNS2Q63HR2 1409 aa18.3■□□□□ 0.52
LRRFIP1-212ENST00000483443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
LRRFIP1-212ENST00000483443 STK32BQ9NY57 414 aa18.29■□□□□ 0.52
LRRFIP1-212ENST00000483443 C1QBPQ07021 282 aaKnown RBP18.28■□□□□ 0.52
LRRFIP1-212ENST00000483443 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
LRRFIP1-212ENST00000483443 PTF1AQ7RTS3 328 aa18.27■□□□□ 0.52
LRRFIP1-212ENST00000483443 CARD11Q9BXL7 1154 aa18.27■□□□□ 0.52
LRRFIP1-212ENST00000483443 USP31Q70CQ4 1352 aa18.27■□□□□ 0.51
LRRFIP1-212ENST00000483443 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
LRRFIP1-212ENST00000483443 ERBB3P21860 1342 aa18.26■□□□□ 0.51
LRRFIP1-212ENST00000483443 TXNRD1Q16881 649 aa18.26■□□□□ 0.51
LRRFIP1-212ENST00000483443 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
LRRFIP1-212ENST00000483443 NLRP2Q9NX02 1062 aa18.26■□□□□ 0.51
LRRFIP1-212ENST00000483443 RGPD5Q99666 1765 aa18.25■□□□□ 0.51
LRRFIP1-212ENST00000483443 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
LRRFIP1-212ENST00000483443 ZBTB7AO95365 584 aa18.24■□□□□ 0.51
LRRFIP1-212ENST00000483443 PROM2Q8N271 834 aa18.24■□□□□ 0.51
LRRFIP1-212ENST00000483443 IL2RBP14784 551 aa18.23■□□□□ 0.51
LRRFIP1-212ENST00000483443 SLC15A2Q16348 729 aa18.23■□□□□ 0.51
LRRFIP1-212ENST00000483443 NME9Q86XW9 330 aa18.23■□□□□ 0.51
LRRFIP1-212ENST00000483443 TERF2IPQ9NYB0 399 aa18.23■□□□□ 0.51
LRRFIP1-212ENST00000483443 EDC4Q6P2E9 1401 aaKnown RBP18.23■□□□□ 0.51
LRRFIP1-212ENST00000483443 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
LRRFIP1-212ENST00000483443 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
LRRFIP1-212ENST00000483443 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.51
LRRFIP1-212ENST00000483443 NHSQ6T4R5 1651 aa18.21■□□□□ 0.51
LRRFIP1-212ENST00000483443 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
LRRFIP1-212ENST00000483443 PDGFDQ9GZP0 370 aaPredicted RBP18.2■□□□□ 0.5
LRRFIP1-212ENST00000483443 MTFR1LQ9H019 292 aa18.2■□□□□ 0.5
LRRFIP1-212ENST00000483443 TONSLQ96HA7 1378 aa18.19■□□□□ 0.5
LRRFIP1-212ENST00000483443 ATF5Q9Y2D1 282 aaPredicted RBP18.19■□□□□ 0.5
LRRFIP1-212ENST00000483443 PTGER2P43116 358 aa18.18■□□□□ 0.5
LRRFIP1-212ENST00000483443 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
LRRFIP1-212ENST00000483443 LTN1O94822 1766 aa18.17■□□□□ 0.5
LRRFIP1-212ENST00000483443 PUS7Q96PZ0 661 aaKnown RBP18.17■□□□□ 0.5
LRRFIP1-212ENST00000483443 MYOM1P52179 1685 aa18.17■□□□□ 0.5
LRRFIP1-212ENST00000483443 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
LRRFIP1-212ENST00000483443 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
LRRFIP1-212ENST00000483443 FHDC1Q9C0D6 1143 aaPredicted RBP18.14■□□□□ 0.49
LRRFIP1-212ENST00000483443 IP6K1Q92551 441 aa18.13■□□□□ 0.49
LRRFIP1-212ENST00000483443 COG3Q96JB2 828 aa18.12■□□□□ 0.49
LRRFIP1-212ENST00000483443 SYT17Q9BSW7 474 aa18.12■□□□□ 0.49
LRRFIP1-212ENST00000483443 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
LRRFIP1-212ENST00000483443 FAM208AQ9UK61 1670 aaKnown RBP18.12■□□□□ 0.49
LRRFIP1-212ENST00000483443 SLC27A3Q5K4L6 730 aa18.11■□□□□ 0.49
LRRFIP1-212ENST00000483443 DDX54Q8TDD1 881 aaKnown RBP18.11■□□□□ 0.49
LRRFIP1-212ENST00000483443 LTV1Q96GA3 475 aaPredicted RBP18.11■□□□□ 0.49
LRRFIP1-212ENST00000483443 ARXQ96QS3 562 aa18.11■□□□□ 0.49
LRRFIP1-212ENST00000483443 BTAF1O14981 1849 aa18.11■□□□□ 0.49
LRRFIP1-212ENST00000483443 AMPHP49418 695 aa18.1■□□□□ 0.49
LRRFIP1-212ENST00000483443 SGIP1Q9BQI5 828 aa18.09■□□□□ 0.49
LRRFIP1-212ENST00000483443 ZNF827Q17R98 1081 aa18.08■□□□□ 0.48
LRRFIP1-212ENST00000483443 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.48
LRRFIP1-212ENST00000483443 MAP3K5Q99683 1374 aa18.07■□□□□ 0.48
LRRFIP1-212ENST00000483443 SLC16A10Q8TF71 515 aa18.07■□□□□ 0.48
LRRFIP1-212ENST00000483443 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
LRRFIP1-212ENST00000483443 UTRNP46939 3433 aa18.07■□□□□ 0.48
LRRFIP1-212ENST00000483443 RTL1A6NKG5 1358 aa18.06■□□□□ 0.48
LRRFIP1-212ENST00000483443 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms