RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 NME9Q86XW9 330 aa13.39□□□□□ -0.27
HMG20B-210ENST00000483417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.39□□□□□ -0.27
HMG20B-210ENST00000483417 POLR3GLQ9BT43 218 aa13.39□□□□□ -0.27
HMG20B-210ENST00000483417 NFAT5O94916 1531 aa13.39□□□□□ -0.27
HMG20B-210ENST00000483417 ZBTB7CA1YPR0 619 aa13.38□□□□□ -0.27
HMG20B-210ENST00000483417 HDGFL2Q7Z4V5 671 aaPredicted RBP13.38□□□□□ -0.27
HMG20B-210ENST00000483417 TERF2IPQ9NYB0 399 aa13.38□□□□□ -0.27
HMG20B-210ENST00000483417 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
HMG20B-210ENST00000483417 A0A1W2PP64 1363 aa13.37□□□□□ -0.27
HMG20B-210ENST00000483417 BAG6P46379 1132 aa13.37□□□□□ -0.27
HMG20B-210ENST00000483417 PDE3BQ13370 1112 aa13.37□□□□□ -0.27
HMG20B-210ENST00000483417 EDC4Q6P2E9 1401 aaKnown RBP13.37□□□□□ -0.27
HMG20B-210ENST00000483417 SOX12O15370 315 aa13.36□□□□□ -0.27
HMG20B-210ENST00000483417 EN1Q05925 392 aaPredicted RBP13.36□□□□□ -0.27
HMG20B-210ENST00000483417 USP54Q70EL1 1684 aa13.36□□□□□ -0.27
HMG20B-210ENST00000483417 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
HMG20B-210ENST00000483417 TRIM37O94972 964 aa13.35□□□□□ -0.27
HMG20B-210ENST00000483417 TOM1L2Q6ZVM7 507 aa13.35□□□□□ -0.27
HMG20B-210ENST00000483417 CARD10Q9BWT7 1032 aa13.35□□□□□ -0.27
HMG20B-210ENST00000483417 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
HMG20B-210ENST00000483417 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
HMG20B-210ENST00000483417 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
HMG20B-210ENST00000483417 PARP4Q9UKK3 1724 aaKnown RBP13.34□□□□□ -0.27
HMG20B-210ENST00000483417 CAMKK2Q96RR4 588 aa13.34□□□□□ -0.27
HMG20B-210ENST00000483417 RGPD5Q99666 1765 aa13.34□□□□□ -0.27
HMG20B-210ENST00000483417 TNS1Q9HBL0 1735 aaKnown RBP13.33□□□□□ -0.27
HMG20B-210ENST00000483417 OVOS2A0A0J9YW53 1432 aa13.33□□□□□ -0.28
HMG20B-210ENST00000483417 OVOS2Q6IE36 1432 aa13.33□□□□□ -0.28
HMG20B-210ENST00000483417 CARD14Q9BXL6 1004 aa13.33□□□□□ -0.28
HMG20B-210ENST00000483417 WASHC2AQ641Q2 1341 aa13.33□□□□□ -0.28
HMG20B-210ENST00000483417 EZH2Q15910 746 aaKnown RBP13.32□□□□□ -0.28
HMG20B-210ENST00000483417 CDCA7Q9BWT1 371 aaPredicted RBP13.32□□□□□ -0.28
HMG20B-210ENST00000483417 ABCC6O95255 1503 aa13.32□□□□□ -0.28
HMG20B-210ENST00000483417 APBA3O96018 575 aa13.31□□□□□ -0.28
HMG20B-210ENST00000483417 DDB1Q16531 1140 aa13.31□□□□□ -0.28
HMG20B-210ENST00000483417 ANKRD36BQ8N2N9 1353 aa13.31□□□□□ -0.28
HMG20B-210ENST00000483417 PEAK1Q9H792 1746 aa13.3□□□□□ -0.28
HMG20B-210ENST00000483417 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
HMG20B-210ENST00000483417 PANK3Q9H999 370 aa13.3□□□□□ -0.28
HMG20B-210ENST00000483417 ERBB3P21860 1342 aa13.3□□□□□ -0.28
HMG20B-210ENST00000483417 FYB1O15117 783 aa13.29□□□□□ -0.28
HMG20B-210ENST00000483417 CSB-PGBD3P0DP91 1061 aa13.29□□□□□ -0.28
HMG20B-210ENST00000483417 FBLN1P23142 703 aa13.29□□□□□ -0.28
HMG20B-210ENST00000483417 CDCA8Q53HL2 280 aa13.29□□□□□ -0.28
HMG20B-210ENST00000483417 IP6K1Q92551 441 aa13.29□□□□□ -0.28
HMG20B-210ENST00000483417 CCDC7Q96M83 1385 aa13.29□□□□□ -0.28
HMG20B-210ENST00000483417 BCL9O00512 1426 aa13.29□□□□□ -0.28
HMG20B-210ENST00000483417 LRRC37A3O60309 1634 aa13.28□□□□□ -0.28
HMG20B-210ENST00000483417 PTF1AQ7RTS3 328 aa13.28□□□□□ -0.28
HMG20B-210ENST00000483417 PARD3Q8TEW0 1356 aa13.28□□□□□ -0.28
HMG20B-210ENST00000483417 PSDA5PKW4 1024 aaPredicted RBP13.27□□□□□ -0.29
HMG20B-210ENST00000483417 EXOC5O00471 708 aa13.27□□□□□ -0.29
HMG20B-210ENST00000483417 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
HMG20B-210ENST00000483417 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.29
HMG20B-210ENST00000483417 SRCAPQ6ZRS2 3230 aa13.27□□□□□ -0.29
HMG20B-210ENST00000483417 PLSCR1O15162 318 aa13.26□□□□□ -0.29
HMG20B-210ENST00000483417 LTN1O94822 1766 aa13.26□□□□□ -0.29
HMG20B-210ENST00000483417 MAP3K19Q56UN5 1328 aa13.26□□□□□ -0.29
HMG20B-210ENST00000483417 COG3Q96JB2 828 aa13.26□□□□□ -0.29
HMG20B-210ENST00000483417 WNK3Q9BYP7 1800 aa13.26□□□□□ -0.29
HMG20B-210ENST00000483417 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
HMG20B-210ENST00000483417 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
HMG20B-210ENST00000483417 R3HDM1Q15032 1099 aaKnown RBP13.25□□□□□ -0.29
HMG20B-210ENST00000483417 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
HMG20B-210ENST00000483417 SBF2Q86WG5 1849 aa13.25□□□□□ -0.29
HMG20B-210ENST00000483417 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
HMG20B-210ENST00000483417 DDX10Q13206 875 aaKnown RBP13.24□□□□□ -0.29
HMG20B-210ENST00000483417 PROM2Q8N271 834 aa13.24□□□□□ -0.29
HMG20B-210ENST00000483417 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
HMG20B-210ENST00000483417 IL2RBP14784 551 aa13.23□□□□□ -0.29
HMG20B-210ENST00000483417 HOXC9P31274 260 aa13.23□□□□□ -0.29
HMG20B-210ENST00000483417 RREB1Q92766 1687 aa13.22□□□□□ -0.29
HMG20B-210ENST00000483417 TNS2Q63HR2 1409 aa13.22□□□□□ -0.29
HMG20B-210ENST00000483417 AMPHP49418 695 aa13.21□□□□□ -0.29
HMG20B-210ENST00000483417 RRS1Q15050 365 aaKnown RBP13.21□□□□□ -0.29
HMG20B-210ENST00000483417 KCNQ2O43526 872 aa13.2□□□□□ -0.3
HMG20B-210ENST00000483417 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
HMG20B-210ENST00000483417 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
HMG20B-210ENST00000483417 MYOM1P52179 1685 aa13.2□□□□□ -0.3
HMG20B-210ENST00000483417 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
HMG20B-210ENST00000483417 LRP5O75197 1615 aa13.19□□□□□ -0.3
HMG20B-210ENST00000483417 HSP90AB2PQ58FF8 381 aa13.18□□□□□ -0.3
HMG20B-210ENST00000483417 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
HMG20B-210ENST00000483417 NBPF6Q5VWK0 638 aa13.18□□□□□ -0.3
HMG20B-210ENST00000483417 NBPF4Q96M43 638 aa13.18□□□□□ -0.3
HMG20B-210ENST00000483417 RTL1A6NKG5 1358 aa13.18□□□□□ -0.3
HMG20B-210ENST00000483417 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
HMG20B-210ENST00000483417 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
HMG20B-210ENST00000483417 NSD3Q9BZ95 1437 aa13.17□□□□□ -0.3
HMG20B-210ENST00000483417 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
HMG20B-210ENST00000483417 INSRP06213 1382 aa13.17□□□□□ -0.3
HMG20B-210ENST00000483417 KIF24Q5T7B8 1368 aa13.17□□□□□ -0.3
HMG20B-210ENST00000483417 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
HMG20B-210ENST00000483417 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
HMG20B-210ENST00000483417 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.3
HMG20B-210ENST00000483417 ACSBG1Q96GR2 724 aa13.15□□□□□ -0.3
HMG20B-210ENST00000483417 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
HMG20B-210ENST00000483417 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
HMG20B-210ENST00000483417 RGPD2P0DJD1 1756 aa13.15□□□□□ -0.31
HMG20B-210ENST00000483417 KIF20BQ96Q89 1820 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms