RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 BRWD3Q6RI45 1802 aa23.62■■□□□ 1.37
NELFCD-208ENST00000482747 GGNBP2Q9H3C7 697 aa23.62■■□□□ 1.37
NELFCD-208ENST00000482747 COL5A2P05997 1499 aaPredicted RBP23.61■■□□□ 1.37
NELFCD-208ENST00000482747 OVOS2A0A0J9YW53 1432 aa23.61■■□□□ 1.37
NELFCD-208ENST00000482747 OVOS2Q6IE36 1432 aa23.61■■□□□ 1.37
NELFCD-208ENST00000482747 COL18A1P39060 1754 aa23.6■■□□□ 1.37
NELFCD-208ENST00000482747 FYB1O15117 783 aa23.6■■□□□ 1.37
NELFCD-208ENST00000482747 RGPD5Q99666 1765 aa23.59■■□□□ 1.37
NELFCD-208ENST00000482747 FAM182BQ5T319 152 aa23.59■■□□□ 1.37
NELFCD-208ENST00000482747 COG3Q96JB2 828 aa23.59■■□□□ 1.37
NELFCD-208ENST00000482747 USP54Q70EL1 1684 aa23.58■■□□□ 1.37
NELFCD-208ENST00000482747 NSD3Q9BZ95 1437 aa23.57■■□□□ 1.36
NELFCD-208ENST00000482747 TOM1L2Q6ZVM7 507 aa23.56■■□□□ 1.36
NELFCD-208ENST00000482747 KRT27Q7Z3Y8 459 aa23.56■■□□□ 1.36
NELFCD-208ENST00000482747 CSB-PGBD3P0DP91 1061 aa23.54■■□□□ 1.36
NELFCD-208ENST00000482747 TCP11L2Q8N4U5 519 aa23.54■■□□□ 1.36
NELFCD-208ENST00000482747 LTN1O94822 1766 aa23.54■■□□□ 1.36
NELFCD-208ENST00000482747 CRB1P82279 1406 aa23.53■■□□□ 1.36
NELFCD-208ENST00000482747 WDR17Q8IZU2 1322 aa23.52■■□□□ 1.36
NELFCD-208ENST00000482747 RRS1Q15050 365 aaKnown RBP23.52■■□□□ 1.36
NELFCD-208ENST00000482747 PANK3Q9H999 370 aa23.52■■□□□ 1.36
NELFCD-208ENST00000482747 THSD7AQ9UPZ6 1657 aa23.51■■□□□ 1.35
NELFCD-208ENST00000482747 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
NELFCD-208ENST00000482747 MAP3K19Q56UN5 1328 aa23.5■■□□□ 1.35
NELFCD-208ENST00000482747 BARGINQ6ZT62 677 aa23.5■■□□□ 1.35
NELFCD-208ENST00000482747 LTV1Q96GA3 475 aaPredicted RBP23.49■■□□□ 1.35
NELFCD-208ENST00000482747 KIF20BQ96Q89 1820 aa23.48■■□□□ 1.35
NELFCD-208ENST00000482747 ANKRD24Q8TF21 1146 aa23.47■■□□□ 1.35
NELFCD-208ENST00000482747 ERBB3P21860 1342 aa23.46■■□□□ 1.35
NELFCD-208ENST00000482747 AMPHP49418 695 aa23.46■■□□□ 1.35
NELFCD-208ENST00000482747 THRAP3Q9Y2W1 955 aaKnown RBP23.46■■□□□ 1.35
NELFCD-208ENST00000482747 IP6K1Q92551 441 aa23.45■■□□□ 1.34
NELFCD-208ENST00000482747 NLRP2Q9NX02 1062 aa23.45■■□□□ 1.34
NELFCD-208ENST00000482747 HOXC9P31274 260 aa23.45■■□□□ 1.34
NELFCD-208ENST00000482747 CGNL1Q0VF96 1302 aa23.44■■□□□ 1.34
NELFCD-208ENST00000482747 CARD10Q9BWT7 1032 aa23.44■■□□□ 1.34
NELFCD-208ENST00000482747 TNNT2P45379 298 aaPredicted RBP23.43■■□□□ 1.34
NELFCD-208ENST00000482747 PDE3BQ13370 1112 aa23.42■■□□□ 1.34
NELFCD-208ENST00000482747 ABCC6O95255 1503 aa23.41■■□□□ 1.34
NELFCD-208ENST00000482747 EMILIN1Q9Y6C2 1016 aa23.41■■□□□ 1.34
NELFCD-208ENST00000482747 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.34
NELFCD-208ENST00000482747 DEFB132Q7Z7B7 95 aa23.39■■□□□ 1.34
NELFCD-208ENST00000482747 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
NELFCD-208ENST00000482747 WASHC2AQ641Q2 1341 aa23.39■■□□□ 1.33
NELFCD-208ENST00000482747 BLMP54132 1417 aaPredicted RBP23.38■■□□□ 1.33
NELFCD-208ENST00000482747 DDB1Q16531 1140 aa23.37■■□□□ 1.33
NELFCD-208ENST00000482747 PEAK1Q9H792 1746 aa23.37■■□□□ 1.33
NELFCD-208ENST00000482747 PARP4Q9UKK3 1724 aaKnown RBP23.37■■□□□ 1.33
NELFCD-208ENST00000482747 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
NELFCD-208ENST00000482747 LRRC37A3O60309 1634 aa23.35■■□□□ 1.33
NELFCD-208ENST00000482747 TRIM37O94972 964 aa23.35■■□□□ 1.33
NELFCD-208ENST00000482747 CCDC125Q86Z20 511 aa23.35■■□□□ 1.33
NELFCD-208ENST00000482747 WNK3Q9BYP7 1800 aa23.35■■□□□ 1.33
NELFCD-208ENST00000482747 DISP2A7MBM2 1401 aa23.34■■□□□ 1.33
NELFCD-208ENST00000482747 SF3B2Q13435 895 aaKnown RBP23.34■■□□□ 1.33
NELFCD-208ENST00000482747 CNGB1Q14028 1251 aaPredicted RBP23.34■■□□□ 1.33
NELFCD-208ENST00000482747 USHBP1Q8N6Y0 703 aa23.34■■□□□ 1.33
NELFCD-208ENST00000482747 KNSTRNQ9Y448 316 aa23.34■■□□□ 1.33
NELFCD-208ENST00000482747 RGPD2P0DJD1 1756 aa23.34■■□□□ 1.33
NELFCD-208ENST00000482747 FAM196AQ6ZSG2 479 aa23.33■■□□□ 1.33
NELFCD-208ENST00000482747 RTL1A6NKG5 1358 aa23.32■■□□□ 1.32
NELFCD-208ENST00000482747 NBPF6Q5VWK0 638 aa23.32■■□□□ 1.32
NELFCD-208ENST00000482747 MARCH10Q8NA82 808 aaPredicted RBP23.32■■□□□ 1.32
NELFCD-208ENST00000482747 NBPF4Q96M43 638 aa23.32■■□□□ 1.32
NELFCD-208ENST00000482747 POLKQ9UBT6 870 aa23.32■■□□□ 1.32
NELFCD-208ENST00000482747 MAP2P11137 1827 aaKnown RBP23.31■■□□□ 1.32
NELFCD-208ENST00000482747 EXOC5O00471 708 aa23.3■■□□□ 1.32
NELFCD-208ENST00000482747 IL2RBP14784 551 aa23.3■■□□□ 1.32
NELFCD-208ENST00000482747 CDCA7Q9BWT1 371 aaPredicted RBP23.3■■□□□ 1.32
NELFCD-208ENST00000482747 FLT4P35916 1363 aa23.3■■□□□ 1.32
NELFCD-208ENST00000482747 MORC1Q86VD1 984 aa23.29■■□□□ 1.32
NELFCD-208ENST00000482747 ANKRD26Q9UPS8 1709 aa23.29■■□□□ 1.32
NELFCD-208ENST00000482747 PER1O15534 1290 aaPredicted RBP23.28■■□□□ 1.32
NELFCD-208ENST00000482747 EN1Q05925 392 aaPredicted RBP23.28■■□□□ 1.32
NELFCD-208ENST00000482747 AMER1Q5JTC6 1135 aaPredicted RBP23.28■■□□□ 1.32
NELFCD-208ENST00000482747 INSRP06213 1382 aa23.28■■□□□ 1.32
NELFCD-208ENST00000482747 PTF1AQ7RTS3 328 aa23.28■■□□□ 1.32
NELFCD-208ENST00000482747 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
NELFCD-208ENST00000482747 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
NELFCD-208ENST00000482747 FAM208AQ9UK61 1670 aaKnown RBP23.25■■□□□ 1.31
NELFCD-208ENST00000482747 APBA3O96018 575 aa23.25■■□□□ 1.31
NELFCD-208ENST00000482747 SMG6Q86US8 1419 aaKnown RBP23.25■■□□□ 1.31
NELFCD-208ENST00000482747 NSD2O96028 1365 aa23.24■■□□□ 1.31
NELFCD-208ENST00000482747 TNS1Q9HBL0 1735 aaKnown RBP23.24■■□□□ 1.31
NELFCD-208ENST00000482747 TNS2Q63HR2 1409 aa23.24■■□□□ 1.31
NELFCD-208ENST00000482747 BAG6P46379 1132 aa23.24■■□□□ 1.31
NELFCD-208ENST00000482747 RGPD1P0DJD0 1748 aa23.23■■□□□ 1.31
NELFCD-208ENST00000482747 KIF24Q5T7B8 1368 aa23.23■■□□□ 1.31
NELFCD-208ENST00000482747 DDX54Q8TDD1 881 aaKnown RBP23.23■■□□□ 1.31
NELFCD-208ENST00000482747 MEGF6O75095 1541 aa23.22■■□□□ 1.31
NELFCD-208ENST00000482747 EZH2Q15910 746 aaKnown RBP23.22■■□□□ 1.31
NELFCD-208ENST00000482747 ACSBG1Q96GR2 724 aa23.21■■□□□ 1.31
NELFCD-208ENST00000482747 SRCAPQ6ZRS2 3230 aa23.2■■□□□ 1.3
NELFCD-208ENST00000482747 KCNQ2O43526 872 aa23.19■■□□□ 1.3
NELFCD-208ENST00000482747 EIF4A2Q14240 407 aaKnown RBP23.19■■□□□ 1.3
NELFCD-208ENST00000482747 EYA1Q99502 592 aa23.19■■□□□ 1.3
NELFCD-208ENST00000482747 SBF2Q86WG5 1849 aa23.19■■□□□ 1.3
NELFCD-208ENST00000482747 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
NELFCD-208ENST00000482747 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
NELFCD-208ENST00000482747 CAMKK2Q96RR4 588 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms