RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 LMO7Q8WWI1 1683 aa26.96■■□□□ 1.91
TRAPPC12-220ENST00000482645 PARD3Q8TEW0 1356 aa26.96■■□□□ 1.91
TRAPPC12-220ENST00000482645 PEAK1Q9H792 1746 aa26.96■■□□□ 1.91
TRAPPC12-220ENST00000482645 SLIT2O94813 1529 aa26.95■■□□□ 1.91
TRAPPC12-220ENST00000482645 CAMTA1Q9Y6Y1 1673 aa26.95■■□□□ 1.91
TRAPPC12-220ENST00000482645 HOXC9P31274 260 aa26.95■■□□□ 1.9
TRAPPC12-220ENST00000482645 FNBP4Q8N3X1 1017 aaPredicted RBP26.95■■□□□ 1.9
TRAPPC12-220ENST00000482645 EVA1CP58658 441 aa26.94■■□□□ 1.9
TRAPPC12-220ENST00000482645 IP6K1Q92551 441 aa26.94■■□□□ 1.9
TRAPPC12-220ENST00000482645 NWD2Q9ULI1 1742 aa26.93■■□□□ 1.9
TRAPPC12-220ENST00000482645 LTV1Q96GA3 475 aaPredicted RBP26.93■■□□□ 1.9
TRAPPC12-220ENST00000482645 RTL1A6NKG5 1358 aa26.92■■□□□ 1.9
TRAPPC12-220ENST00000482645 FLT4P35916 1363 aa26.92■■□□□ 1.9
TRAPPC12-220ENST00000482645 RALBP1Q15311 655 aa26.92■■□□□ 1.9
TRAPPC12-220ENST00000482645 BCL9LQ86UU0 1499 aa26.91■■□□□ 1.9
TRAPPC12-220ENST00000482645 PPP2R1AP30153 589 aa26.91■■□□□ 1.9
TRAPPC12-220ENST00000482645 MTHFSP49914 203 aa26.91■■□□□ 1.9
TRAPPC12-220ENST00000482645 HSP90AB2PQ58FF8 381 aa26.91■■□□□ 1.9
TRAPPC12-220ENST00000482645 UNC5CLQ8IV45 518 aa26.91■■□□□ 1.9
TRAPPC12-220ENST00000482645 ABCC6O95255 1503 aa26.91■■□□□ 1.9
TRAPPC12-220ENST00000482645 PRKRIP1Q9H875 184 aaPredicted RBP26.9■■□□□ 1.9
TRAPPC12-220ENST00000482645 NRAPQ86VF7 1730 aa26.9■■□□□ 1.9
TRAPPC12-220ENST00000482645 COL5A2P05997 1499 aaPredicted RBP26.9■■□□□ 1.9
TRAPPC12-220ENST00000482645 CSB-PGBD3P0DP91 1061 aa26.9■■□□□ 1.9
TRAPPC12-220ENST00000482645 MIER1Q8N108 512 aa26.9■■□□□ 1.9
TRAPPC12-220ENST00000482645 BLMP54132 1417 aaPredicted RBP26.89■■□□□ 1.9
TRAPPC12-220ENST00000482645 CCDC9Q9Y3X0 531 aaKnown RBP26.89■■□□□ 1.89
TRAPPC12-220ENST00000482645 KIF24Q5T7B8 1368 aa26.89■■□□□ 1.89
TRAPPC12-220ENST00000482645 SMG6Q86US8 1419 aaKnown RBP26.89■■□□□ 1.89
TRAPPC12-220ENST00000482645 ZNF772Q68DY9 489 aaPredicted RBP26.88■■□□□ 1.89
TRAPPC12-220ENST00000482645 ANKRD24Q8TF21 1146 aa26.88■■□□□ 1.89
TRAPPC12-220ENST00000482645 LARP1Q6PKG0 1096 aaKnown RBP26.86■■□□□ 1.89
TRAPPC12-220ENST00000482645 CDK12Q9NYV4 1490 aaPredicted RBP26.86■■□□□ 1.89
TRAPPC12-220ENST00000482645 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.86■■□□□ 1.89
TRAPPC12-220ENST00000482645 INSRP06213 1382 aa26.86■■□□□ 1.89
TRAPPC12-220ENST00000482645 ERBB3P21860 1342 aa26.85■■□□□ 1.89
TRAPPC12-220ENST00000482645 RGS17Q9UGC6 210 aaPredicted RBP26.85■■□□□ 1.89
TRAPPC12-220ENST00000482645 MYBBP1AQ9BQG0 1328 aaKnown RBP26.84■■□□□ 1.89
TRAPPC12-220ENST00000482645 TOM1L2Q6ZVM7 507 aa26.84■■□□□ 1.89
TRAPPC12-220ENST00000482645 QTRT2Q9H974 415 aaKnown RBP26.84■■□□□ 1.89
TRAPPC12-220ENST00000482645 USP35Q9P2H5 1018 aa26.84■■□□□ 1.89
TRAPPC12-220ENST00000482645 WDR17Q8IZU2 1322 aa26.83■■□□□ 1.89
TRAPPC12-220ENST00000482645 TRPC5Q9UL62 973 aaPredicted RBP26.83■■□□□ 1.89
TRAPPC12-220ENST00000482645 NLRP2Q9NX02 1062 aa26.81■■□□□ 1.88
TRAPPC12-220ENST00000482645 VPS72Q15906 364 aa26.8■■□□□ 1.88
TRAPPC12-220ENST00000482645 EIF4A2Q14240 407 aaKnown RBP26.8■■□□□ 1.88
TRAPPC12-220ENST00000482645 CFAP53Q96M91 514 aa26.8■■□□□ 1.88
TRAPPC12-220ENST00000482645 ATRNO75882 1429 aa26.8■■□□□ 1.88
TRAPPC12-220ENST00000482645 CRB1P82279 1406 aa26.79■■□□□ 1.88
TRAPPC12-220ENST00000482645 RGPD2P0DJD1 1756 aa26.77■■□□□ 1.88
TRAPPC12-220ENST00000482645 POTEAQ6S8J7 498 aa26.77■■□□□ 1.88
TRAPPC12-220ENST00000482645 SPATA31A5Q5VU36 1347 aa26.77■■□□□ 1.88
TRAPPC12-220ENST00000482645 SPATA31A7Q8IWB4 1347 aa26.77■■□□□ 1.88
TRAPPC12-220ENST00000482645 GJD4Q96KN9 370 aaPredicted RBP26.76■■□□□ 1.87
TRAPPC12-220ENST00000482645 FAM208AQ9UK61 1670 aaKnown RBP26.75■■□□□ 1.87
TRAPPC12-220ENST00000482645 SPATA31A1Q5TZJ5 1347 aa26.75■■□□□ 1.87
TRAPPC12-220ENST00000482645 DIAPH1O60610 1272 aaKnown RBP26.75■■□□□ 1.87
TRAPPC12-220ENST00000482645 USHBP1Q8N6Y0 703 aa26.75■■□□□ 1.87
TRAPPC12-220ENST00000482645 NBPF6Q5VWK0 638 aa26.74■■□□□ 1.87
TRAPPC12-220ENST00000482645 NBPF4Q96M43 638 aa26.74■■□□□ 1.87
TRAPPC12-220ENST00000482645 COL3A1P02461 1466 aaPredicted RBP26.73■■□□□ 1.87
TRAPPC12-220ENST00000482645 CARD10Q9BWT7 1032 aa26.73■■□□□ 1.87
TRAPPC12-220ENST00000482645 GLI3P10071 1580 aa26.72■■□□□ 1.87
TRAPPC12-220ENST00000482645 IL13P35225 146 aa26.72■■□□□ 1.87
TRAPPC12-220ENST00000482645 TCP11L2Q8N4U5 519 aa26.71■■□□□ 1.87
TRAPPC12-220ENST00000482645 EYA1Q99502 592 aa26.71■■□□□ 1.87
TRAPPC12-220ENST00000482645 A0A0G2JS52 829 aa26.7■■□□□ 1.87
TRAPPC12-220ENST00000482645 U2SURPO15042 1029 aaKnown RBP26.7■■□□□ 1.87
TRAPPC12-220ENST00000482645 RXRBP28702 533 aa26.7■■□□□ 1.87
TRAPPC12-220ENST00000482645 RBM6P78332 1123 aaKnown RBP26.7■■□□□ 1.87
TRAPPC12-220ENST00000482645 MYT1Q01538 1121 aa26.7■■□□□ 1.87
TRAPPC12-220ENST00000482645 FAM98CQ17RN3 349 aaKnown RBP26.7■■□□□ 1.87
TRAPPC12-220ENST00000482645 CCER2I3L3R5 266 aa26.66■■□□□ 1.86
TRAPPC12-220ENST00000482645 NUDCQ9Y266 331 aa26.66■■□□□ 1.86
TRAPPC12-220ENST00000482645 THRAP3Q9Y2W1 955 aaKnown RBP26.66■■□□□ 1.86
TRAPPC12-220ENST00000482645 IGSF1Q8N6C5 1336 aa26.65■■□□□ 1.86
TRAPPC12-220ENST00000482645 CCDC184Q52MB2 194 aa26.65■■□□□ 1.86
TRAPPC12-220ENST00000482645 HMOX1P09601 288 aa26.64■■□□□ 1.85
TRAPPC12-220ENST00000482645 SULT6B1Q6IMI4 303 aa26.64■■□□□ 1.85
TRAPPC12-220ENST00000482645 RGPD1P0DJD0 1748 aa26.63■■□□□ 1.85
TRAPPC12-220ENST00000482645 BARGINQ6ZT62 677 aa26.63■■□□□ 1.85
TRAPPC12-220ENST00000482645 AEBP1Q8IUX7 1158 aa26.63■■□□□ 1.85
TRAPPC12-220ENST00000482645 U2AF1L5P0DN76 240 aaPredicted RBP26.62■■□□□ 1.85
TRAPPC12-220ENST00000482645 U2AF1Q01081 240 aaKnown RBP eCLIP26.62■■□□□ 1.85
TRAPPC12-220ENST00000482645 MRS2Q9HD23 443 aa26.62■■□□□ 1.85
TRAPPC12-220ENST00000482645 WNK3Q9BYP7 1800 aa26.62■■□□□ 1.85
TRAPPC12-220ENST00000482645 IL2RBP14784 551 aa26.61■■□□□ 1.85
TRAPPC12-220ENST00000482645 RAPGEF4Q8WZA2 1011 aa26.61■■□□□ 1.85
TRAPPC12-220ENST00000482645 MEGF6O75095 1541 aa26.59■■□□□ 1.85
TRAPPC12-220ENST00000482645 SEPT12Q8IYM1 358 aa26.59■■□□□ 1.85
TRAPPC12-220ENST00000482645 NCAPD2Q15021 1401 aa26.59■■□□□ 1.85
TRAPPC12-220ENST00000482645 DISP2A7MBM2 1401 aa26.57■■□□□ 1.84
TRAPPC12-220ENST00000482645 RGS12O14924 1447 aa26.57■■□□□ 1.84
TRAPPC12-220ENST00000482645 TATP17735 454 aaPredicted RBP26.57■■□□□ 1.84
TRAPPC12-220ENST00000482645 WDR43Q15061 677 aaKnown RBP eCLIP26.57■■□□□ 1.84
TRAPPC12-220ENST00000482645 THSD7AQ9UPZ6 1657 aa26.56■■□□□ 1.84
TRAPPC12-220ENST00000482645 CDCA7Q9BWT1 371 aaPredicted RBP26.56■■□□□ 1.84
TRAPPC12-220ENST00000482645 PARP4Q9UKK3 1724 aaKnown RBP26.55■■□□□ 1.84
TRAPPC12-220ENST00000482645 ONECUT3O60422 494 aaPredicted RBP26.55■■□□□ 1.84
TRAPPC12-220ENST00000482645 KDRP35968 1356 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms