RNA–Protein interactions for RNA: ENST00000482601.1

GTDC1-215, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-215ENST00000482601 FAM83GA6ND36 823 aa13.68□□□□□ -0.22
GTDC1-215ENST00000482601 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
GTDC1-215ENST00000482601 ADAMTS2O95450 1211 aa13.68□□□□□ -0.22
GTDC1-215ENST00000482601 FNBP4Q8N3X1 1017 aaPredicted RBP13.68□□□□□ -0.22
GTDC1-215ENST00000482601 SLIT2O94813 1529 aa13.68□□□□□ -0.22
GTDC1-215ENST00000482601 CCER2I3L3R5 266 aa13.67□□□□□ -0.22
GTDC1-215ENST00000482601 PPM1GO15355 546 aaPredicted RBP13.67□□□□□ -0.22
GTDC1-215ENST00000482601 FBLN1P23142 703 aa13.67□□□□□ -0.22
GTDC1-215ENST00000482601 MEX3CQ5U5Q3 659 aaKnown RBP13.67□□□□□ -0.22
GTDC1-215ENST00000482601 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
GTDC1-215ENST00000482601 COL18A1P39060 1754 aa13.67□□□□□ -0.22
GTDC1-215ENST00000482601 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
GTDC1-215ENST00000482601 MAP2P11137 1827 aaKnown RBP13.67□□□□□ -0.22
GTDC1-215ENST00000482601 ERBB3P21860 1342 aa13.66□□□□□ -0.22
GTDC1-215ENST00000482601 PEAK1Q9H792 1746 aa13.66□□□□□ -0.22
GTDC1-215ENST00000482601 COL5A2P05997 1499 aaPredicted RBP13.66□□□□□ -0.22
GTDC1-215ENST00000482601 CAMTA1Q9Y6Y1 1673 aa13.66□□□□□ -0.22
GTDC1-215ENST00000482601 CHRNA2Q15822 529 aa13.65□□□□□ -0.22
GTDC1-215ENST00000482601 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
GTDC1-215ENST00000482601 NGLY1Q96IV0 654 aa13.65□□□□□ -0.22
GTDC1-215ENST00000482601 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.22
GTDC1-215ENST00000482601 ZBTB7CA1YPR0 619 aa13.64□□□□□ -0.23
GTDC1-215ENST00000482601 DIAPH1O60610 1272 aaKnown RBP13.64□□□□□ -0.23
GTDC1-215ENST00000482601 C8orf37Q96NL8 207 aa13.64□□□□□ -0.23
GTDC1-215ENST00000482601 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
GTDC1-215ENST00000482601 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
GTDC1-215ENST00000482601 AXIN2Q9Y2T1 843 aa13.64□□□□□ -0.23
GTDC1-215ENST00000482601 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
GTDC1-215ENST00000482601 PLCH1Q4KWH8 1693 aa13.63□□□□□ -0.23
GTDC1-215ENST00000482601 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
GTDC1-215ENST00000482601 PLEKHG2Q9H7P9 1386 aa13.63□□□□□ -0.23
GTDC1-215ENST00000482601 ANKRD24Q8TF21 1146 aa13.63□□□□□ -0.23
GTDC1-215ENST00000482601 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
GTDC1-215ENST00000482601 IL13P35225 146 aa13.62□□□□□ -0.23
GTDC1-215ENST00000482601 EVA1CP58658 441 aa13.62□□□□□ -0.23
GTDC1-215ENST00000482601 EIF4A2Q14240 407 aaKnown RBP13.62□□□□□ -0.23
GTDC1-215ENST00000482601 UNC5CLQ8IV45 518 aa13.62□□□□□ -0.23
GTDC1-215ENST00000482601 CRB1P82279 1406 aa13.62□□□□□ -0.23
GTDC1-215ENST00000482601 BCL9LQ86UU0 1499 aa13.61□□□□□ -0.23
GTDC1-215ENST00000482601 ZNF772Q68DY9 489 aaPredicted RBP13.61□□□□□ -0.23
GTDC1-215ENST00000482601 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
GTDC1-215ENST00000482601 CSB-PGBD3P0DP91 1061 aa13.6□□□□□ -0.23
GTDC1-215ENST00000482601 VPS72Q15906 364 aa13.6□□□□□ -0.23
GTDC1-215ENST00000482601 NRAPQ86VF7 1730 aa13.6□□□□□ -0.23
GTDC1-215ENST00000482601 MIER1Q8N108 512 aa13.6□□□□□ -0.23
GTDC1-215ENST00000482601 CARD10Q9BWT7 1032 aa13.6□□□□□ -0.23
GTDC1-215ENST00000482601 MRS2Q9HD23 443 aa13.6□□□□□ -0.23
GTDC1-215ENST00000482601 USP21Q9UK80 565 aa13.6□□□□□ -0.23
GTDC1-215ENST00000482601 AFF2P51816 1311 aa13.6□□□□□ -0.23
GTDC1-215ENST00000482601 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
GTDC1-215ENST00000482601 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
GTDC1-215ENST00000482601 KDRP35968 1356 aa13.58□□□□□ -0.23
GTDC1-215ENST00000482601 TOM1L2Q6ZVM7 507 aa13.58□□□□□ -0.24
GTDC1-215ENST00000482601 STRN4Q9NRL3 753 aa13.58□□□□□ -0.24
GTDC1-215ENST00000482601 TRPC5Q9UL62 973 aaPredicted RBP13.58□□□□□ -0.24
GTDC1-215ENST00000482601 RGPD1P0DJD0 1748 aa13.57□□□□□ -0.24
GTDC1-215ENST00000482601 WDR43Q15061 677 aaKnown RBP eCLIP13.57□□□□□ -0.24
GTDC1-215ENST00000482601 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
GTDC1-215ENST00000482601 LTV1Q96GA3 475 aaPredicted RBP13.57□□□□□ -0.24
GTDC1-215ENST00000482601 EYA1Q99502 592 aa13.57□□□□□ -0.24
GTDC1-215ENST00000482601 CDCA7Q9BWT1 371 aaPredicted RBP13.57□□□□□ -0.24
GTDC1-215ENST00000482601 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
GTDC1-215ENST00000482601 NLRP2Q9NX02 1062 aa13.57□□□□□ -0.24
GTDC1-215ENST00000482601 SPATA31A5Q5VU36 1347 aa13.57□□□□□ -0.24
GTDC1-215ENST00000482601 SPATA31A7Q8IWB4 1347 aa13.57□□□□□ -0.24
GTDC1-215ENST00000482601 ATRNO75882 1429 aa13.56□□□□□ -0.24
GTDC1-215ENST00000482601 FCHSD2O94868 740 aa13.56□□□□□ -0.24
GTDC1-215ENST00000482601 NBPF6Q5VWK0 638 aa13.56□□□□□ -0.24
GTDC1-215ENST00000482601 PNISRQ8TF01 805 aaKnown RBP13.56□□□□□ -0.24
GTDC1-215ENST00000482601 NBPF4Q96M43 638 aa13.56□□□□□ -0.24
GTDC1-215ENST00000482601 SPATA31A1Q5TZJ5 1347 aa13.56□□□□□ -0.24
GTDC1-215ENST00000482601 U2SURPO15042 1029 aaKnown RBP13.55□□□□□ -0.24
GTDC1-215ENST00000482601 MSH5O43196 834 aa13.55□□□□□ -0.24
GTDC1-215ENST00000482601 U2AF1L5P0DN76 240 aaPredicted RBP13.55□□□□□ -0.24
GTDC1-215ENST00000482601 U2AF1Q01081 240 aaKnown RBP eCLIP13.55□□□□□ -0.24
GTDC1-215ENST00000482601 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
GTDC1-215ENST00000482601 TCP11L2Q8N4U5 519 aa13.55□□□□□ -0.24
GTDC1-215ENST00000482601 RGPD5Q99666 1765 aa13.55□□□□□ -0.24
GTDC1-215ENST00000482601 CCDC184Q52MB2 194 aa13.53□□□□□ -0.24
GTDC1-215ENST00000482601 SULT6B1Q6IMI4 303 aa13.53□□□□□ -0.24
GTDC1-215ENST00000482601 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
GTDC1-215ENST00000482601 GJD4Q96KN9 370 aaPredicted RBP13.53□□□□□ -0.24
GTDC1-215ENST00000482601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.53□□□□□ -0.24
GTDC1-215ENST00000482601 QTRT2Q9H974 415 aaKnown RBP13.52□□□□□ -0.25
GTDC1-215ENST00000482601 CCDC9Q9Y3X0 531 aaKnown RBP13.52□□□□□ -0.25
GTDC1-215ENST00000482601 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
GTDC1-215ENST00000482601 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
GTDC1-215ENST00000482601 NEFMP07197 916 aa13.51□□□□□ -0.25
GTDC1-215ENST00000482601 IL2RBP14784 551 aa13.51□□□□□ -0.25
GTDC1-215ENST00000482601 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
GTDC1-215ENST00000482601 OVOS2A0A0G2JMS6 1433 aa13.5□□□□□ -0.25
GTDC1-215ENST00000482601 TATP17735 454 aaPredicted RBP13.5□□□□□ -0.25
GTDC1-215ENST00000482601 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
GTDC1-215ENST00000482601 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
GTDC1-215ENST00000482601 ADAMTS8Q9UP79 889 aa13.5□□□□□ -0.25
GTDC1-215ENST00000482601 HMOX1P09601 288 aa13.49□□□□□ -0.25
GTDC1-215ENST00000482601 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
GTDC1-215ENST00000482601 USP35Q9P2H5 1018 aa13.49□□□□□ -0.25
GTDC1-215ENST00000482601 GLI3P10071 1580 aa13.49□□□□□ -0.25
GTDC1-215ENST00000482601 PARP4Q9UKK3 1724 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms