RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 C1QTNF8P60827 252 aa18.78■□□□□ 0.6
TSPAN1-207ENST00000482143 PTGER2P43116 358 aa18.77■□□□□ 0.6
TSPAN1-207ENST00000482143 SYT17Q9BSW7 474 aa18.77■□□□□ 0.6
TSPAN1-207ENST00000482143 PLEKHG3A1L390 1219 aa18.75■□□□□ 0.59
TSPAN1-207ENST00000482143 PTF1AQ7RTS3 328 aa18.75■□□□□ 0.59
TSPAN1-207ENST00000482143 RGPD5Q99666 1765 aa18.75■□□□□ 0.59
TSPAN1-207ENST00000482143 PPIP5K1Q6PFW1 1433 aa18.74■□□□□ 0.59
TSPAN1-207ENST00000482143 UTRNP46939 3433 aa18.74■□□□□ 0.59
TSPAN1-207ENST00000482143 SRPK2P78362 688 aaKnown RBP18.74■□□□□ 0.59
TSPAN1-207ENST00000482143 MTFR1LQ9H019 292 aa18.74■□□□□ 0.59
TSPAN1-207ENST00000482143 SLC15A2Q16348 729 aa18.73■□□□□ 0.59
TSPAN1-207ENST00000482143 TXNRD1Q16881 649 aa18.73■□□□□ 0.59
TSPAN1-207ENST00000482143 AATKQ6ZMQ8 1374 aa18.72■□□□□ 0.59
TSPAN1-207ENST00000482143 NLRP6P59044 892 aa18.72■□□□□ 0.59
TSPAN1-207ENST00000482143 CDCA7Q9BWT1 371 aaPredicted RBP18.72■□□□□ 0.59
TSPAN1-207ENST00000482143 PROM2Q8N271 834 aa18.71■□□□□ 0.59
TSPAN1-207ENST00000482143 MARCH10Q8NA82 808 aaPredicted RBP18.71■□□□□ 0.59
TSPAN1-207ENST00000482143 COL18A1P39060 1754 aa18.7■□□□□ 0.58
TSPAN1-207ENST00000482143 QRICH2Q9H0J4 1663 aa18.7■□□□□ 0.58
TSPAN1-207ENST00000482143 GIGYF1O75420 1035 aaPredicted RBP18.7■□□□□ 0.58
TSPAN1-207ENST00000482143 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
TSPAN1-207ENST00000482143 WDR17Q8IZU2 1322 aa18.7■□□□□ 0.58
TSPAN1-207ENST00000482143 SLIT3O75094 1523 aa18.69■□□□□ 0.58
TSPAN1-207ENST00000482143 GPR162Q16538 588 aa18.69■□□□□ 0.58
TSPAN1-207ENST00000482143 ARXQ96QS3 562 aa18.69■□□□□ 0.58
TSPAN1-207ENST00000482143 KAT6BQ8WYB5 2073 aa18.69■□□□□ 0.58
TSPAN1-207ENST00000482143 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
TSPAN1-207ENST00000482143 KLHL34Q8N239 644 aa18.68■□□□□ 0.58
TSPAN1-207ENST00000482143 NHSQ6T4R5 1651 aa18.68■□□□□ 0.58
TSPAN1-207ENST00000482143 BCL9O00512 1426 aa18.67■□□□□ 0.58
TSPAN1-207ENST00000482143 PIK3C2AO00443 1686 aa18.67■□□□□ 0.58
TSPAN1-207ENST00000482143 EXOC5O00471 708 aa18.66■□□□□ 0.58
TSPAN1-207ENST00000482143 NBPF1Q3BBV0 1214 aa18.66■□□□□ 0.58
TSPAN1-207ENST00000482143 PELP1Q8IZL8 1130 aaKnown RBP18.66■□□□□ 0.58
TSPAN1-207ENST00000482143 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
TSPAN1-207ENST00000482143 USP6P35125 1406 aa18.66■□□□□ 0.58
TSPAN1-207ENST00000482143 CPSF1Q10570 1443 aaKnown RBP18.65■□□□□ 0.58
TSPAN1-207ENST00000482143 SOX12O15370 315 aa18.64■□□□□ 0.57
TSPAN1-207ENST00000482143 BTAF1O14981 1849 aa18.64■□□□□ 0.57
TSPAN1-207ENST00000482143 SGIP1Q9BQI5 828 aa18.63■□□□□ 0.57
TSPAN1-207ENST00000482143 AXIN2Q9Y2T1 843 aa18.63■□□□□ 0.57
TSPAN1-207ENST00000482143 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
TSPAN1-207ENST00000482143 CARD10Q9BWT7 1032 aa18.62■□□□□ 0.57
TSPAN1-207ENST00000482143 MAP3K5Q99683 1374 aa18.62■□□□□ 0.57
TSPAN1-207ENST00000482143 TNS2Q63HR2 1409 aa18.62■□□□□ 0.57
TSPAN1-207ENST00000482143 PAPPAQ13219 1627 aa18.61■□□□□ 0.57
TSPAN1-207ENST00000482143 CENPJQ9HC77 1338 aaPredicted RBP18.61■□□□□ 0.57
TSPAN1-207ENST00000482143 ACSBG1Q96GR2 724 aa18.61■□□□□ 0.57
TSPAN1-207ENST00000482143 CABP1Q9NZU7 370 aa18.61■□□□□ 0.57
TSPAN1-207ENST00000482143 CCDC7Q96M83 1385 aa18.6■□□□□ 0.57
TSPAN1-207ENST00000482143 CEP350Q5VT06 3117 aa18.6■□□□□ 0.57
TSPAN1-207ENST00000482143 KCNH5Q8NCM2 988 aa18.6■□□□□ 0.57
TSPAN1-207ENST00000482143 POLD1P28340 1107 aa18.59■□□□□ 0.57
TSPAN1-207ENST00000482143 QSER1Q2KHR3 1735 aa18.58■□□□□ 0.57
TSPAN1-207ENST00000482143 ABCC6O95255 1503 aa18.58■□□□□ 0.56
TSPAN1-207ENST00000482143 ARHGEF25Q86VW2 580 aa18.57■□□□□ 0.56
TSPAN1-207ENST00000482143 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
TSPAN1-207ENST00000482143 ZNF827Q17R98 1081 aa18.54■□□□□ 0.56
TSPAN1-207ENST00000482143 LTN1O94822 1766 aa18.54■□□□□ 0.56
TSPAN1-207ENST00000482143 TUBGCP6Q96RT7 1819 aa18.53■□□□□ 0.56
TSPAN1-207ENST00000482143 SLC16A10Q8TF71 515 aa18.52■□□□□ 0.56
TSPAN1-207ENST00000482143 NLRP2Q9NX02 1062 aa18.52■□□□□ 0.56
TSPAN1-207ENST00000482143 COL24A1Q17RW2 1714 aa18.52■□□□□ 0.55
TSPAN1-207ENST00000482143 TTC21BQ7Z4L5 1316 aa18.51■□□□□ 0.55
TSPAN1-207ENST00000482143 NFAT5O94916 1531 aa18.51■□□□□ 0.55
TSPAN1-207ENST00000482143 L3MBTL2Q969R5 705 aa18.51■□□□□ 0.55
TSPAN1-207ENST00000482143 EVC2Q86UK5 1308 aa18.5■□□□□ 0.55
TSPAN1-207ENST00000482143 MON2Q7Z3U7 1717 aa18.5■□□□□ 0.55
TSPAN1-207ENST00000482143 USP54Q70EL1 1684 aa18.5■□□□□ 0.55
TSPAN1-207ENST00000482143 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
TSPAN1-207ENST00000482143 IL2RBP14784 551 aa18.49■□□□□ 0.55
TSPAN1-207ENST00000482143 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
TSPAN1-207ENST00000482143 TFCP2L1Q9NZI6 479 aa18.49■□□□□ 0.55
TSPAN1-207ENST00000482143 GRIN3BO60391 1043 aa18.48■□□□□ 0.55
TSPAN1-207ENST00000482143 LRRC4BQ9NT99 713 aa18.48■□□□□ 0.55
TSPAN1-207ENST00000482143 GOLGB1Q14789 3259 aaKnown RBP18.48■□□□□ 0.55
TSPAN1-207ENST00000482143 NLGN2Q8NFZ4 835 aa18.47■□□□□ 0.55
TSPAN1-207ENST00000482143 KTN1Q86UP2 1357 aaKnown RBP18.46■□□□□ 0.55
TSPAN1-207ENST00000482143 MSH5O43196 834 aa18.46■□□□□ 0.55
TSPAN1-207ENST00000482143 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
TSPAN1-207ENST00000482143 AKT1S1Q96B36 256 aa18.46■□□□□ 0.55
TSPAN1-207ENST00000482143 PNPLA7Q6ZV29 1317 aa18.46■□□□□ 0.55
TSPAN1-207ENST00000482143 DOT1LQ8TEK3 1739 aa18.45■□□□□ 0.54
TSPAN1-207ENST00000482143 ERBB3P21860 1342 aa18.45■□□□□ 0.54
TSPAN1-207ENST00000482143 SYTL4Q96C24 671 aaPredicted RBP18.44■□□□□ 0.54
TSPAN1-207ENST00000482143 SBNO2Q9Y2G9 1366 aa18.43■□□□□ 0.54
TSPAN1-207ENST00000482143 ATP10DQ9P241 1426 aa18.43■□□□□ 0.54
TSPAN1-207ENST00000482143 DDX54Q8TDD1 881 aaKnown RBP18.43■□□□□ 0.54
TSPAN1-207ENST00000482143 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
TSPAN1-207ENST00000482143 GPBP1L1Q9HC44 474 aaPredicted RBP18.43■□□□□ 0.54
TSPAN1-207ENST00000482143 LY75O60449 1722 aa18.43■□□□□ 0.54
TSPAN1-207ENST00000482143 FAM208AQ9UK61 1670 aaKnown RBP18.42■□□□□ 0.54
TSPAN1-207ENST00000482143 YBX3P16989 372 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSPAN1-207ENST00000482143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSPAN1-207ENST00000482143 ANKRD24Q8TF21 1146 aa18.41■□□□□ 0.54
TSPAN1-207ENST00000482143 ROCK2O75116 1388 aaKnown RBP18.41■□□□□ 0.54
TSPAN1-207ENST00000482143 KCNQ4P56696 695 aa18.4■□□□□ 0.54
TSPAN1-207ENST00000482143 CD163L1Q9NR16 1453 aa18.39■□□□□ 0.54
TSPAN1-207ENST00000482143 ZNF526Q8TF50 670 aaPredicted RBP18.39■□□□□ 0.53
TSPAN1-207ENST00000482143 HSPA6P17066 643 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms