RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 CCDC125Q86Z20 511 aa20.62■□□□□ 0.89
OPTN-210ENST00000482140 TCP11L2Q8N4U5 519 aa20.62■□□□□ 0.89
OPTN-210ENST00000482140 LTN1O94822 1766 aa20.62■□□□□ 0.89
OPTN-210ENST00000482140 BARGINQ6ZT62 677 aa20.61■□□□□ 0.89
OPTN-210ENST00000482140 TOM1L2Q6ZVM7 507 aa20.61■□□□□ 0.89
OPTN-210ENST00000482140 THRAP3Q9Y2W1 955 aaKnown RBP20.61■□□□□ 0.89
OPTN-210ENST00000482140 OVOS2A0A0J9YW53 1432 aa20.61■□□□□ 0.89
OPTN-210ENST00000482140 OVOS2Q6IE36 1432 aa20.61■□□□□ 0.89
OPTN-210ENST00000482140 HSPA5P11021 654 aaKnown RBP20.6■□□□□ 0.89
OPTN-210ENST00000482140 SF3B2Q13435 895 aaKnown RBP20.6■□□□□ 0.89
OPTN-210ENST00000482140 COG3Q96JB2 828 aa20.6■□□□□ 0.89
OPTN-210ENST00000482140 POLR3GLQ9BT43 218 aa20.6■□□□□ 0.89
OPTN-210ENST00000482140 MYOM1P52179 1685 aa20.6■□□□□ 0.89
OPTN-210ENST00000482140 ABCC6O95255 1503 aa20.59■□□□□ 0.89
OPTN-210ENST00000482140 CSB-PGBD3P0DP91 1061 aa20.59■□□□□ 0.89
OPTN-210ENST00000482140 AXIN2Q9Y2T1 843 aa20.59■□□□□ 0.89
OPTN-210ENST00000482140 BLMP54132 1417 aaPredicted RBP20.59■□□□□ 0.89
OPTN-210ENST00000482140 WDR17Q8IZU2 1322 aa20.58■□□□□ 0.89
OPTN-210ENST00000482140 EP400Q96L91 3159 aa20.56■□□□□ 0.88
OPTN-210ENST00000482140 KIF20BQ96Q89 1820 aa20.56■□□□□ 0.88
OPTN-210ENST00000482140 PDE3BQ13370 1112 aa20.56■□□□□ 0.88
OPTN-210ENST00000482140 PARP4Q9UKK3 1724 aaKnown RBP20.54■□□□□ 0.88
OPTN-210ENST00000482140 FAM182BQ5T319 152 aa20.54■□□□□ 0.88
OPTN-210ENST00000482140 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
OPTN-210ENST00000482140 FYB1O15117 783 aa20.52■□□□□ 0.88
OPTN-210ENST00000482140 CARD10Q9BWT7 1032 aa20.52■□□□□ 0.88
OPTN-210ENST00000482140 GGNBP2Q9H3C7 697 aa20.52■□□□□ 0.88
OPTN-210ENST00000482140 NSD3Q9BZ95 1437 aa20.52■□□□□ 0.87
OPTN-210ENST00000482140 RGPD1P0DJD0 1748 aa20.51■□□□□ 0.87
OPTN-210ENST00000482140 FAM196AQ6ZSG2 479 aa20.5■□□□□ 0.87
OPTN-210ENST00000482140 ERBB3P21860 1342 aa20.5■□□□□ 0.87
OPTN-210ENST00000482140 CCDC7Q96M83 1385 aa20.49■□□□□ 0.87
OPTN-210ENST00000482140 AMPHP49418 695 aa20.49■□□□□ 0.87
OPTN-210ENST00000482140 ANKRD24Q8TF21 1146 aa20.49■□□□□ 0.87
OPTN-210ENST00000482140 CDCA7Q9BWT1 371 aaPredicted RBP20.49■□□□□ 0.87
OPTN-210ENST00000482140 NLRP2Q9NX02 1062 aa20.49■□□□□ 0.87
OPTN-210ENST00000482140 BAG6P46379 1132 aa20.48■□□□□ 0.87
OPTN-210ENST00000482140 DDB1Q16531 1140 aa20.48■□□□□ 0.87
OPTN-210ENST00000482140 IP6K1Q92551 441 aa20.48■□□□□ 0.87
OPTN-210ENST00000482140 CARD14Q9BXL6 1004 aa20.48■□□□□ 0.87
OPTN-210ENST00000482140 LRRC37A3O60309 1634 aa20.48■□□□□ 0.87
OPTN-210ENST00000482140 MAP3K19Q56UN5 1328 aa20.48■□□□□ 0.87
OPTN-210ENST00000482140 DEFB132Q7Z7B7 95 aa20.47■□□□□ 0.87
OPTN-210ENST00000482140 FBLN1P23142 703 aa20.46■□□□□ 0.87
OPTN-210ENST00000482140 CGNL1Q0VF96 1302 aa20.46■□□□□ 0.87
OPTN-210ENST00000482140 FAM208AQ9UK61 1670 aaKnown RBP20.45■□□□□ 0.86
OPTN-210ENST00000482140 LTV1Q96GA3 475 aaPredicted RBP20.45■□□□□ 0.86
OPTN-210ENST00000482140 C11orf95C9JLR9 678 aaPredicted RBP20.44■□□□□ 0.86
OPTN-210ENST00000482140 TRIM37O94972 964 aa20.44■□□□□ 0.86
OPTN-210ENST00000482140 RRS1Q15050 365 aaKnown RBP20.44■□□□□ 0.86
OPTN-210ENST00000482140 RTL1A6NKG5 1358 aa20.44■□□□□ 0.86
OPTN-210ENST00000482140 TNS1Q9HBL0 1735 aaKnown RBP20.44■□□□□ 0.86
OPTN-210ENST00000482140 HOXC9P31274 260 aa20.43■□□□□ 0.86
OPTN-210ENST00000482140 OVOS2A0A0G2JMS6 1433 aa20.43■□□□□ 0.86
OPTN-210ENST00000482140 DISP2A7MBM2 1401 aa20.43■□□□□ 0.86
OPTN-210ENST00000482140 EXOC5O00471 708 aa20.41■□□□□ 0.86
OPTN-210ENST00000482140 IL2RBP14784 551 aa20.4■□□□□ 0.86
OPTN-210ENST00000482140 PANK3Q9H999 370 aa20.4■□□□□ 0.86
OPTN-210ENST00000482140 SMG6Q86US8 1419 aaKnown RBP20.39■□□□□ 0.85
OPTN-210ENST00000482140 EN1Q05925 392 aaPredicted RBP20.39■□□□□ 0.85
OPTN-210ENST00000482140 PEAK1Q9H792 1746 aa20.39■□□□□ 0.85
OPTN-210ENST00000482140 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
OPTN-210ENST00000482140 TNS2Q63HR2 1409 aa20.38■□□□□ 0.85
OPTN-210ENST00000482140 APBA3O96018 575 aa20.38■□□□□ 0.85
OPTN-210ENST00000482140 RGPD2P0DJD1 1756 aa20.37■□□□□ 0.85
OPTN-210ENST00000482140 MARCH10Q8NA82 808 aaPredicted RBP20.37■□□□□ 0.85
OPTN-210ENST00000482140 SBF2Q86WG5 1849 aa20.37■□□□□ 0.85
OPTN-210ENST00000482140 FLT4P35916 1363 aa20.36■□□□□ 0.85
OPTN-210ENST00000482140 KIF24Q5T7B8 1368 aa20.36■□□□□ 0.85
OPTN-210ENST00000482140 MAP2P11137 1827 aaKnown RBP20.36■□□□□ 0.85
OPTN-210ENST00000482140 KIF7Q2M1P5 1343 aa20.35■□□□□ 0.85
OPTN-210ENST00000482140 INSRP06213 1382 aa20.34■□□□□ 0.85
OPTN-210ENST00000482140 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
OPTN-210ENST00000482140 EMILIN1Q9Y6C2 1016 aa20.34■□□□□ 0.85
OPTN-210ENST00000482140 EZH2Q15910 746 aaKnown RBP20.33■□□□□ 0.85
OPTN-210ENST00000482140 HSP90AB2PQ58FF8 381 aa20.33■□□□□ 0.85
OPTN-210ENST00000482140 KNSTRNQ9Y448 316 aa20.33■□□□□ 0.85
OPTN-210ENST00000482140 TNNT2P45379 298 aaPredicted RBP20.32■□□□□ 0.84
OPTN-210ENST00000482140 NSD2O96028 1365 aa20.32■□□□□ 0.84
OPTN-210ENST00000482140 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
OPTN-210ENST00000482140 BCL9O00512 1426 aa20.31■□□□□ 0.84
OPTN-210ENST00000482140 PARD3Q8TEW0 1356 aa20.31■□□□□ 0.84
OPTN-210ENST00000482140 CAMKK2Q96RR4 588 aa20.3■□□□□ 0.84
OPTN-210ENST00000482140 NBPF6Q5VWK0 638 aa20.29■□□□□ 0.84
OPTN-210ENST00000482140 NBPF4Q96M43 638 aa20.29■□□□□ 0.84
OPTN-210ENST00000482140 BCL11BQ9C0K0 894 aaPredicted RBP20.29■□□□□ 0.84
OPTN-210ENST00000482140 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
OPTN-210ENST00000482140 RREB1Q92766 1687 aa20.27■□□□□ 0.84
OPTN-210ENST00000482140 MORC1Q86VD1 984 aa20.27■□□□□ 0.84
OPTN-210ENST00000482140 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.84
OPTN-210ENST00000482140 RAPGEF4Q8WZA2 1011 aa20.27■□□□□ 0.84
OPTN-210ENST00000482140 POLKQ9UBT6 870 aa20.27■□□□□ 0.84
OPTN-210ENST00000482140 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.83
OPTN-210ENST00000482140 TATP17735 454 aaPredicted RBP20.25■□□□□ 0.83
OPTN-210ENST00000482140 ZCRB1Q8TBF4 217 aaKnown RBP20.25■□□□□ 0.83
OPTN-210ENST00000482140 ACSBG1Q96GR2 724 aa20.25■□□□□ 0.83
OPTN-210ENST00000482140 MEGF6O75095 1541 aa20.25■□□□□ 0.83
OPTN-210ENST00000482140 RGPD3A6NKT7 1758 aaPredicted RBP20.25■□□□□ 0.83
OPTN-210ENST00000482140 RGPD4Q7Z3J3 1758 aa20.25■□□□□ 0.83
OPTN-210ENST00000482140 NHSQ6T4R5 1651 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms