RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 GAS6Q14393 721 aa5.62□□□□□ -1.51
USH2A-204ENST00000481786 SENP3-EIF4A1A0A087X0R7 540 aa5.61□□□□□ -1.51
USH2A-204ENST00000481786 Q8N3U1 123 aa5.61□□□□□ -1.51
USH2A-204ENST00000481786 AGBL1Q96MI9 1066 aa5.61□□□□□ -1.51
USH2A-204ENST00000481786 CUEDC1Q9NWM3 386 aaPredicted RBP5.61□□□□□ -1.51
USH2A-204ENST00000481786 SPINT1O43278 529 aa5.6□□□□□ -1.51
USH2A-204ENST00000481786 VASH1Q7L8A9 365 aaPredicted RBP5.6□□□□□ -1.51
USH2A-204ENST00000481786 CCDC116Q8IYX3 515 aa5.6□□□□□ -1.51
USH2A-204ENST00000481786 C1QTNF2Q9BXJ5 285 aa5.6□□□□□ -1.51
USH2A-204ENST00000481786 BPHLQ86WA6 291 aaPredicted RBP5.59□□□□□ -1.51
USH2A-204ENST00000481786 EMILIN1Q9Y6C2 1016 aa5.59□□□□□ -1.51
USH2A-204ENST00000481786 PPP1R26Q5T8A7 1209 aaPredicted RBP5.58□□□□□ -1.52
USH2A-204ENST00000481786 Q6ZVU0 165 aa5.58□□□□□ -1.52
USH2A-204ENST00000481786 KRTAP1-3Q8IUG1 177 aa5.58□□□□□ -1.52
USH2A-204ENST00000481786 CABLES1Q8TDN4 633 aa5.58□□□□□ -1.52
USH2A-204ENST00000481786 INSM2Q96T92 566 aaPredicted RBP5.58□□□□□ -1.52
USH2A-204ENST00000481786 MAGEB6P1A0A0J9YX57 407 aa5.57□□□□□ -1.52
USH2A-204ENST00000481786 SPDYE5A6NIY4 337 aa5.57□□□□□ -1.52
USH2A-204ENST00000481786 K7ELQ4 463 aaPredicted RBP5.57□□□□□ -1.52
USH2A-204ENST00000481786 HRCP23327 699 aa5.57□□□□□ -1.52
USH2A-204ENST00000481786 MAP3K10Q02779 954 aa5.57□□□□□ -1.52
USH2A-204ENST00000481786 SRSF11Q05519 484 aaKnown RBP5.57□□□□□ -1.52
USH2A-204ENST00000481786 KRI1Q8N9T8 703 aaKnown RBP5.57□□□□□ -1.52
USH2A-204ENST00000481786 SLC24A1O60721 1099 aa5.56□□□□□ -1.52
USH2A-204ENST00000481786 RELBQ01201 579 aa5.56□□□□□ -1.52
USH2A-204ENST00000481786 RSBN1LQ6PCB5 846 aaPredicted RBP5.56□□□□□ -1.52
USH2A-204ENST00000481786 GALNT6Q8NCL4 622 aa5.56□□□□□ -1.52
USH2A-204ENST00000481786 CARD14Q9BXL6 1004 aa5.56□□□□□ -1.52
USH2A-204ENST00000481786 ZNF395Q9H8N7 513 aaPredicted RBP5.56□□□□□ -1.52
USH2A-204ENST00000481786 GPR25O00155 361 aa5.55□□□□□ -1.52
USH2A-204ENST00000481786 FURINP09958 794 aa5.55□□□□□ -1.52
USH2A-204ENST00000481786 SH3BP5LQ7L8J4 393 aa5.55□□□□□ -1.52
USH2A-204ENST00000481786 RNF217Q8TC41 542 aa5.55□□□□□ -1.52
USH2A-204ENST00000481786 MAP4K5Q9Y4K4 846 aa5.55□□□□□ -1.52
USH2A-204ENST00000481786 BAG6P46379 1132 aa5.54□□□□□ -1.52
USH2A-204ENST00000481786 CSPP1Q1MSJ5 1256 aa5.54□□□□□ -1.52
USH2A-204ENST00000481786 TRMT44Q8IYL2 757 aaKnown RBP5.54□□□□□ -1.52
USH2A-204ENST00000481786 TBC1D2Q9BYX2 928 aa5.54□□□□□ -1.52
USH2A-204ENST00000481786 POLMQ9NP87 494 aaPredicted RBP5.54□□□□□ -1.52
USH2A-204ENST00000481786 KRBA1A5PL33 1030 aa5.53□□□□□ -1.52
USH2A-204ENST00000481786 ERFEQ4G0M1 354 aa5.53□□□□□ -1.52
USH2A-204ENST00000481786 TSC1Q92574 1164 aa5.53□□□□□ -1.52
USH2A-204ENST00000481786 BEGAINQ9BUH8 593 aa5.53□□□□□ -1.52
USH2A-204ENST00000481786 PHF20L1A8MW92 1017 aa5.52□□□□□ -1.53
USH2A-204ENST00000481786 FOXD4L5Q5VV16 416 aaPredicted RBP5.52□□□□□ -1.53
USH2A-204ENST00000481786 BEND7Q8N7W2 519 aaPredicted RBP5.52□□□□□ -1.53
USH2A-204ENST00000481786 ACDQ96AP0 544 aa5.52□□□□□ -1.53
USH2A-204ENST00000481786 PGPEP1Q9NXJ5 209 aa5.52□□□□□ -1.53
USH2A-204ENST00000481786 IGF1RP08069 1367 aa5.52□□□□□ -1.53
USH2A-204ENST00000481786 SNRPNP63162 240 aaKnown RBP5.51□□□□□ -1.53
USH2A-204ENST00000481786 GIGYF2Q6Y7W6 1299 aaKnown RBP5.51□□□□□ -1.53
USH2A-204ENST00000481786 NEDD1Q8NHV4 660 aa5.51□□□□□ -1.53
USH2A-204ENST00000481786 ZBTB3Q9H5J0 574 aa5.51□□□□□ -1.53
USH2A-204ENST00000481786 ENAMQ9NRM1 1142 aa5.51□□□□□ -1.53
USH2A-204ENST00000481786 BCRP11274 1271 aa5.5□□□□□ -1.53
USH2A-204ENST00000481786 RHOQP17081 205 aa5.5□□□□□ -1.53
USH2A-204ENST00000481786 TTLL12Q14166 644 aaPredicted RBP5.5□□□□□ -1.53
USH2A-204ENST00000481786 KDF1Q8NAX2 398 aaPredicted RBP5.5□□□□□ -1.53
USH2A-204ENST00000481786 ZNF837Q96EG3 531 aaPredicted RBP5.5□□□□□ -1.53
USH2A-204ENST00000481786 KCTD15Q96SI1 283 aaPredicted RBP5.5□□□□□ -1.53
USH2A-204ENST00000481786 TMPRSS4Q9NRS4 437 aa5.5□□□□□ -1.53
USH2A-204ENST00000481786 ITGB7P26010 798 aa5.49□□□□□ -1.53
USH2A-204ENST00000481786 DBN1Q16643 649 aa5.49□□□□□ -1.53
USH2A-204ENST00000481786 QPCTQ16769 361 aa5.49□□□□□ -1.53
USH2A-204ENST00000481786 MBIPQ9NS73 344 aa5.49□□□□□ -1.53
USH2A-204ENST00000481786 COL8A1P27658 744 aa5.48□□□□□ -1.53
USH2A-204ENST00000481786 ADD1P35611 737 aaKnown RBP5.48□□□□□ -1.53
USH2A-204ENST00000481786 GJA5P36382 358 aa5.48□□□□□ -1.53
USH2A-204ENST00000481786 RIC3Q7Z5B4 369 aa5.48□□□□□ -1.53
USH2A-204ENST00000481786 TULP1O00294 542 aaPredicted RBP5.47□□□□□ -1.53
USH2A-204ENST00000481786 INTS6LQ5JSJ4 861 aaKnown RBP5.47□□□□□ -1.53
USH2A-204ENST00000481786 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
USH2A-204ENST00000481786 NBPF14Q5TI25 921 aa5.47□□□□□ -1.53
USH2A-204ENST00000481786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.47□□□□□ -1.53
USH2A-204ENST00000481786 PRICKLE2Q7Z3G6 844 aa5.47□□□□□ -1.53
USH2A-204ENST00000481786 PODNQ7Z5L7 613 aa5.47□□□□□ -1.53
USH2A-204ENST00000481786 ARMC2Q8NEN0 867 aa5.47□□□□□ -1.53
USH2A-204ENST00000481786 LIMD1Q9UGP4 676 aa5.47□□□□□ -1.53
USH2A-204ENST00000481786 LILRA1O75019 489 aa5.45□□□□□ -1.54
USH2A-204ENST00000481786 RAB15P59190 212 aa5.45□□□□□ -1.54
USH2A-204ENST00000481786 RTL5Q5HYW3 569 aaPredicted RBP5.45□□□□□ -1.54
USH2A-204ENST00000481786 PRPF38BQ5VTL8 546 aaKnown RBP5.45□□□□□ -1.54
USH2A-204ENST00000481786 C1orf229Q6ZS94 237 aaPredicted RBP5.45□□□□□ -1.54
USH2A-204ENST00000481786 LYSMD3Q7Z3D4 306 aa5.45□□□□□ -1.54
USH2A-204ENST00000481786 ZNF784Q8NCA9 323 aaPredicted RBP5.45□□□□□ -1.54
USH2A-204ENST00000481786 GTPBP3Q969Y2 492 aaKnown RBP5.45□□□□□ -1.54
USH2A-204ENST00000481786 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
USH2A-204ENST00000481786 OCSTAMPQ9BR26 566 aa5.45□□□□□ -1.54
USH2A-204ENST00000481786 NUTM2BA6NNL0 878 aaPredicted RBP5.44□□□□□ -1.54
USH2A-204ENST00000481786 NUTM2EB1AL46 878 aaPredicted RBP5.44□□□□□ -1.54
USH2A-204ENST00000481786 SHISA8B8ZZ34 492 aa5.44□□□□□ -1.54
USH2A-204ENST00000481786 NUTM2DQ5VT03 806 aaPredicted RBP5.44□□□□□ -1.54
USH2A-204ENST00000481786 RIPOR1Q6ZS17 1223 aa5.44□□□□□ -1.54
USH2A-204ENST00000481786 NUTM2AQ8IVF1 878 aaPredicted RBP5.44□□□□□ -1.54
USH2A-204ENST00000481786 TRIM22Q8IYM9 498 aa5.44□□□□□ -1.54
USH2A-204ENST00000481786 SUV39H2Q9H5I1 410 aa5.44□□□□□ -1.54
USH2A-204ENST00000481786 OIP5O43482 229 aa5.43□□□□□ -1.54
USH2A-204ENST00000481786 LILRB3O75022 631 aa5.43□□□□□ -1.54
USH2A-204ENST00000481786 ADH1AP07327 375 aa5.43□□□□□ -1.54
USH2A-204ENST00000481786 PTGIRP43119 386 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms