RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 CKAP2LQ8IYA6 745 aa13.7□□□□□ -0.22
TRIM27-205ENST00000481474 CCDC82Q8N4S0 544 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 EFCAB2Q5VUJ9 269 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 NUTM1Q86Y26 1132 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 DYDC1Q8WWB3 177 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 MINDY4BA8MYZ0 360 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 TICAM2Q86XR7 235 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 ACBD3Q9H3P7 528 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 VAT1LQ9HCJ6 419 aa13.69□□□□□ -0.22
TRIM27-205ENST00000481474 ZNHIT6Q9NWK9 470 aaKnown RBP13.68□□□□□ -0.22
TRIM27-205ENST00000481474 TNIP1Q15025 636 aa13.68□□□□□ -0.22
TRIM27-205ENST00000481474 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
TRIM27-205ENST00000481474 UBTFL1P0CB47 393 aaPredicted RBP13.68□□□□□ -0.22
TRIM27-205ENST00000481474 STAMBPO95630 424 aa13.68□□□□□ -0.22
TRIM27-205ENST00000481474 PKNOX2Q96KN3 472 aa13.68□□□□□ -0.22
TRIM27-205ENST00000481474 TMX1Q9H3N1 280 aa13.68□□□□□ -0.22
TRIM27-205ENST00000481474 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
TRIM27-205ENST00000481474 SERPINC1P01008 464 aa13.68□□□□□ -0.22
TRIM27-205ENST00000481474 RNF187Q5TA31 235 aaPredicted RBP13.68□□□□□ -0.22
TRIM27-205ENST00000481474 ZNF710Q8N1W2 664 aa13.68□□□□□ -0.22
TRIM27-205ENST00000481474 F8W031 263 aaPredicted RBP13.67□□□□□ -0.22
TRIM27-205ENST00000481474 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
TRIM27-205ENST00000481474 SPOUT1Q5T280 376 aaKnown RBP13.67□□□□□ -0.22
TRIM27-205ENST00000481474 GSTTP1A0A1W2PQM5 241 aa13.67□□□□□ -0.22
TRIM27-205ENST00000481474 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
TRIM27-205ENST00000481474 ERC2O15083 957 aa13.66□□□□□ -0.22
TRIM27-205ENST00000481474 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
TRIM27-205ENST00000481474 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.66□□□□□ -0.229e-8■■■■■ 41.3
TRIM27-205ENST00000481474 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
TRIM27-205ENST00000481474 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
TRIM27-205ENST00000481474 RPGRQ92834 1020 aaKnown RBP13.66□□□□□ -0.22
TRIM27-205ENST00000481474 DNAI2Q9GZS0 605 aa13.66□□□□□ -0.22
TRIM27-205ENST00000481474 SURF6O75683 361 aaKnown RBP13.65□□□□□ -0.22
TRIM27-205ENST00000481474 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
TRIM27-205ENST00000481474 CCDC150Q8NCX0 1101 aa13.65□□□□□ -0.22
TRIM27-205ENST00000481474 GNL1P36915 607 aaPredicted RBP13.65□□□□□ -0.22
TRIM27-205ENST00000481474 MKNK2Q9HBH9 465 aa13.65□□□□□ -0.22
TRIM27-205ENST00000481474 TRIM5Q9C035 493 aa13.65□□□□□ -0.22
TRIM27-205ENST00000481474 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.23
TRIM27-205ENST00000481474 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
TRIM27-205ENST00000481474 ERICH4A6NGS2 130 aa13.64□□□□□ -0.23
TRIM27-205ENST00000481474 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
TRIM27-205ENST00000481474 CPLX3Q8WVH0 158 aa13.64□□□□□ -0.23
TRIM27-205ENST00000481474 SRRTQ9BXP5 876 aaKnown RBP13.64□□□□□ -0.23
TRIM27-205ENST00000481474 CCDC91Q7Z6B0 441 aa13.64□□□□□ -0.23
TRIM27-205ENST00000481474 INCENPQ9NQS7 918 aa13.64□□□□□ -0.23
TRIM27-205ENST00000481474 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
TRIM27-205ENST00000481474 BICD1Q96G01 975 aa13.63□□□□□ -0.23
TRIM27-205ENST00000481474 PRDM11Q9NQV5 511 aa13.63□□□□□ -0.23
TRIM27-205ENST00000481474 WAPLQ7Z5K2 1190 aa13.63□□□□□ -0.23
TRIM27-205ENST00000481474 BMP2KQ9NSY1 1161 aaPredicted RBP13.63□□□□□ -0.23
TRIM27-205ENST00000481474 ARGLU1Q9NWB6 273 aaPredicted RBP13.63□□□□□ -0.23
TRIM27-205ENST00000481474 STK38Q15208 465 aa13.63□□□□□ -0.23
TRIM27-205ENST00000481474 DIAPH1O60610 1272 aaKnown RBP13.62□□□□□ -0.23
TRIM27-205ENST00000481474 MAP2K1Q02750 393 aaPredicted RBP13.62□□□□□ -0.23
TRIM27-205ENST00000481474 LARP1Q6PKG0 1096 aaKnown RBP13.62□□□□□ -0.23
TRIM27-205ENST00000481474 RAB3IL1Q8TBN0 382 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 SP4Q02446 784 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 STIM1Q13586 685 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 TTC30BQ8N4P2 665 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 PANK3Q9H999 370 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 ZBTB9Q96C00 473 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 TIGD1Q96MW7 591 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 NAT10Q9H0A0 1025 aaKnown RBP13.62□□□□□ -0.23
TRIM27-205ENST00000481474 CCDC178Q5BJE1 867 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
TRIM27-205ENST00000481474 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRIM27-205ENST00000481474 CLGNO14967 610 aa13.61□□□□□ -0.23
TRIM27-205ENST00000481474 PSMC4P43686 418 aa13.61□□□□□ -0.23
TRIM27-205ENST00000481474 TRIM22Q8IYM9 498 aa13.61□□□□□ -0.23
TRIM27-205ENST00000481474 SEC63Q9UGP8 760 aaKnown RBP13.61□□□□□ -0.23
TRIM27-205ENST00000481474 GJA3Q9Y6H8 435 aa13.61□□□□□ -0.23
TRIM27-205ENST00000481474 PPFIBP1Q86W92 1011 aa13.61□□□□□ -0.23
TRIM27-205ENST00000481474 UBAC1Q9BSL1 405 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 REC8O95072 547 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 KIAA1328Q86T90 577 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 GPATCH11Q8N954 259 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 KINO60870 393 aaKnown RBP13.6□□□□□ -0.23
TRIM27-205ENST00000481474 NLRP5P59047 1200 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.6□□□□□ -0.236e-7■■■□□ 16
TRIM27-205ENST00000481474 DDX11L8A8MPP1 907 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 CNTROBQ8N137 903 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 PRKG1Q13976 671 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 NACAP1Q9BZK3 213 aa13.6□□□□□ -0.23
TRIM27-205ENST00000481474 NDC80O14777 642 aa13.59□□□□□ -0.23
TRIM27-205ENST00000481474 PPP2R5CQ13362 524 aa13.59□□□□□ -0.23
TRIM27-205ENST00000481474 HAUS7Q99871 368 aa13.59□□□□□ -0.23
TRIM27-205ENST00000481474 SYNCQ9H7C4 482 aa13.59□□□□□ -0.23
TRIM27-205ENST00000481474 HOOK3Q86VS8 718 aa13.59□□□□□ -0.23
TRIM27-205ENST00000481474 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
TRIM27-205ENST00000481474 ST20-MTHFSA0A0A6YYL1 179 aa13.59□□□□□ -0.23
TRIM27-205ENST00000481474 CCDC175P0C221 793 aa13.59□□□□□ -0.23
TRIM27-205ENST00000481474 MTHFSP49914 203 aa13.59□□□□□ -0.23
TRIM27-205ENST00000481474 EIF5P55010 431 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms