RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 OVOS2Q6IE36 1432 aa15.96■□□□□ 0.15
RAPGEF1-207ENST00000481260 POLR3GLQ9BT43 218 aa15.96■□□□□ 0.15
RAPGEF1-207ENST00000481260 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
RAPGEF1-207ENST00000481260 KRT27Q7Z3Y8 459 aa15.94■□□□□ 0.14
RAPGEF1-207ENST00000481260 NINLQ9Y2I6 1382 aa15.94■□□□□ 0.14
RAPGEF1-207ENST00000481260 RGPD5Q99666 1765 aa15.93■□□□□ 0.14
RAPGEF1-207ENST00000481260 EIF4G2P78344 907 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAPGEF1-207ENST00000481260 KCNH5Q8NCM2 988 aa15.93■□□□□ 0.14
RAPGEF1-207ENST00000481260 GGNBP2Q9H3C7 697 aa15.93■□□□□ 0.14
RAPGEF1-207ENST00000481260 FYB1O15117 783 aa15.92■□□□□ 0.14
RAPGEF1-207ENST00000481260 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
RAPGEF1-207ENST00000481260 SRCAPQ6ZRS2 3230 aa15.9■□□□□ 0.14
RAPGEF1-207ENST00000481260 CRB1P82279 1406 aa15.9■□□□□ 0.14
RAPGEF1-207ENST00000481260 NSD3Q9BZ95 1437 aa15.9■□□□□ 0.14
RAPGEF1-207ENST00000481260 SLC24A1O60721 1099 aa15.89■□□□□ 0.13
RAPGEF1-207ENST00000481260 BARGINQ6ZT62 677 aa15.89■□□□□ 0.13
RAPGEF1-207ENST00000481260 TOM1L2Q6ZVM7 507 aa15.89■□□□□ 0.13
RAPGEF1-207ENST00000481260 DEFB132Q7Z7B7 95 aa15.89■□□□□ 0.13
RAPGEF1-207ENST00000481260 WDR17Q8IZU2 1322 aa15.89■□□□□ 0.13
RAPGEF1-207ENST00000481260 RRS1Q15050 365 aaKnown RBP15.88■□□□□ 0.13
RAPGEF1-207ENST00000481260 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
RAPGEF1-207ENST00000481260 COG3Q96JB2 828 aa15.88■□□□□ 0.13
RAPGEF1-207ENST00000481260 MAP3K19Q56UN5 1328 aa15.88■□□□□ 0.13
RAPGEF1-207ENST00000481260 LTN1O94822 1766 aa15.87■□□□□ 0.13
RAPGEF1-207ENST00000481260 CSB-PGBD3P0DP91 1061 aa15.86■□□□□ 0.13
RAPGEF1-207ENST00000481260 LTV1Q96GA3 475 aaPredicted RBP15.86■□□□□ 0.13
RAPGEF1-207ENST00000481260 ANKRD24Q8TF21 1146 aa15.85■□□□□ 0.13
RAPGEF1-207ENST00000481260 ERBB3P21860 1342 aa15.85■□□□□ 0.13
RAPGEF1-207ENST00000481260 BLMP54132 1417 aaPredicted RBP15.85■□□□□ 0.13
RAPGEF1-207ENST00000481260 PANK3Q9H999 370 aa15.84■□□□□ 0.13
RAPGEF1-207ENST00000481260 DISP2A7MBM2 1401 aa15.84■□□□□ 0.13
RAPGEF1-207ENST00000481260 LRRC37A3O60309 1634 aa15.83■□□□□ 0.13
RAPGEF1-207ENST00000481260 HOXC9P31274 260 aa15.83■□□□□ 0.12
RAPGEF1-207ENST00000481260 PTF1AQ7RTS3 328 aa15.83■□□□□ 0.12
RAPGEF1-207ENST00000481260 IP6K1Q92551 441 aa15.83■□□□□ 0.12
RAPGEF1-207ENST00000481260 CARD10Q9BWT7 1032 aa15.83■□□□□ 0.12
RAPGEF1-207ENST00000481260 KIF7Q2M1P5 1343 aa15.83■□□□□ 0.12
RAPGEF1-207ENST00000481260 PEAK1Q9H792 1746 aa15.82■□□□□ 0.12
RAPGEF1-207ENST00000481260 KIF20BQ96Q89 1820 aa15.82■□□□□ 0.12
RAPGEF1-207ENST00000481260 NLRP2Q9NX02 1062 aa15.82■□□□□ 0.12
RAPGEF1-207ENST00000481260 THRAP3Q9Y2W1 955 aaKnown RBP15.82■□□□□ 0.12
RAPGEF1-207ENST00000481260 ABCC6O95255 1503 aa15.82■□□□□ 0.12
RAPGEF1-207ENST00000481260 TRIM37O94972 964 aa15.81■□□□□ 0.12
RAPGEF1-207ENST00000481260 PARP4Q9UKK3 1724 aaKnown RBP15.81■□□□□ 0.12
RAPGEF1-207ENST00000481260 WNK3Q9BYP7 1800 aa15.8■□□□□ 0.12
RAPGEF1-207ENST00000481260 PDE3BQ13370 1112 aa15.8■□□□□ 0.12
RAPGEF1-207ENST00000481260 MARCH10Q8NA82 808 aaPredicted RBP15.8■□□□□ 0.12
RAPGEF1-207ENST00000481260 EMILIN1Q9Y6C2 1016 aa15.8■□□□□ 0.12
RAPGEF1-207ENST00000481260 AMPHP49418 695 aa15.79■□□□□ 0.12
RAPGEF1-207ENST00000481260 HSP90AB2PQ58FF8 381 aa15.79■□□□□ 0.12
RAPGEF1-207ENST00000481260 TNS1Q9HBL0 1735 aaKnown RBP15.78■□□□□ 0.12
RAPGEF1-207ENST00000481260 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
RAPGEF1-207ENST00000481260 EN1Q05925 392 aaPredicted RBP15.78■□□□□ 0.12
RAPGEF1-207ENST00000481260 DDB1Q16531 1140 aa15.78■□□□□ 0.12
RAPGEF1-207ENST00000481260 USHBP1Q8N6Y0 703 aa15.78■□□□□ 0.12
RAPGEF1-207ENST00000481260 RGPD2P0DJD1 1756 aa15.77■□□□□ 0.12
RAPGEF1-207ENST00000481260 CCDC125Q86Z20 511 aa15.77■□□□□ 0.12
RAPGEF1-207ENST00000481260 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
RAPGEF1-207ENST00000481260 FAM196AQ6ZSG2 479 aa15.76■□□□□ 0.11
RAPGEF1-207ENST00000481260 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
RAPGEF1-207ENST00000481260 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
RAPGEF1-207ENST00000481260 CGNL1Q0VF96 1302 aa15.75■□□□□ 0.11
RAPGEF1-207ENST00000481260 WASHC2AQ641Q2 1341 aa15.75■□□□□ 0.11
RAPGEF1-207ENST00000481260 FAM208AQ9UK61 1670 aaKnown RBP15.75■□□□□ 0.11
RAPGEF1-207ENST00000481260 PPM1GO15355 546 aaPredicted RBP15.74■□□□□ 0.11
RAPGEF1-207ENST00000481260 SF3B2Q13435 895 aaKnown RBP15.74■□□□□ 0.11
RAPGEF1-207ENST00000481260 EZH2Q15910 746 aaKnown RBP15.74■□□□□ 0.11
RAPGEF1-207ENST00000481260 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
RAPGEF1-207ENST00000481260 MEGF6O75095 1541 aa15.73■□□□□ 0.11
RAPGEF1-207ENST00000481260 IL2RBP14784 551 aa15.73■□□□□ 0.11
RAPGEF1-207ENST00000481260 POLKQ9UBT6 870 aa15.73■□□□□ 0.11
RAPGEF1-207ENST00000481260 TNS2Q63HR2 1409 aa15.73■□□□□ 0.11
RAPGEF1-207ENST00000481260 RGPD1P0DJD0 1748 aa15.73■□□□□ 0.11
RAPGEF1-207ENST00000481260 OVOS2A0A0G2JMS6 1433 aa15.72■□□□□ 0.11
RAPGEF1-207ENST00000481260 APBA3O96018 575 aa15.72■□□□□ 0.11
RAPGEF1-207ENST00000481260 CAMKK2Q96RR4 588 aa15.72■□□□□ 0.11
RAPGEF1-207ENST00000481260 EXOC5O00471 708 aa15.71■□□□□ 0.11
RAPGEF1-207ENST00000481260 KCNQ2O43526 872 aa15.71■□□□□ 0.11
RAPGEF1-207ENST00000481260 BAG6P46379 1132 aa15.71■□□□□ 0.11
RAPGEF1-207ENST00000481260 AMER1Q5JTC6 1135 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-207ENST00000481260 CDCA7Q9BWT1 371 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-207ENST00000481260 INSRP06213 1382 aa15.71■□□□□ 0.11
RAPGEF1-207ENST00000481260 FLT4P35916 1363 aa15.71■□□□□ 0.11
RAPGEF1-207ENST00000481260 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
RAPGEF1-207ENST00000481260 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF1-207ENST00000481260 PER1O15534 1290 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF1-207ENST00000481260 CNGB1Q14028 1251 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF1-207ENST00000481260 ANKRD26Q9UPS8 1709 aa15.68■□□□□ 0.1
RAPGEF1-207ENST00000481260 SBF2Q86WG5 1849 aa15.68■□□□□ 0.1
RAPGEF1-207ENST00000481260 DDX54Q8TDD1 881 aaKnown RBP15.67■□□□□ 0.1
RAPGEF1-207ENST00000481260 MAP2P11137 1827 aaKnown RBP15.66■□□□□ 0.1
RAPGEF1-207ENST00000481260 SHANK3Q9BYB0 1731 aa15.66■□□□□ 0.1
RAPGEF1-207ENST00000481260 EIF4A2Q14240 407 aaKnown RBP15.66■□□□□ 0.1
RAPGEF1-207ENST00000481260 MORC1Q86VD1 984 aa15.66■□□□□ 0.1
RAPGEF1-207ENST00000481260 KNSTRNQ9Y448 316 aa15.66■□□□□ 0.1
RAPGEF1-207ENST00000481260 CC2D1BQ5T0F9 858 aaKnown RBP15.65■□□□□ 0.1
RAPGEF1-207ENST00000481260 PROM2Q8N271 834 aa15.65■□□□□ 0.1
RAPGEF1-207ENST00000481260 EYA1Q99502 592 aa15.65■□□□□ 0.1
RAPGEF1-207ENST00000481260 BCL11BQ9C0K0 894 aaPredicted RBP15.65■□□□□ 0.1
RAPGEF1-207ENST00000481260 BCL9O00512 1426 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms