RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 KAT6BQ8WYB5 2073 aa9.26□□□□□ -0.93
PRDM1-206ENST00000481163 TOM1L2Q6ZVM7 507 aa9.25□□□□□ -0.93
PRDM1-206ENST00000481163 LTV1Q96GA3 475 aaPredicted RBP9.25□□□□□ -0.93
PRDM1-206ENST00000481163 AXIN2Q9Y2T1 843 aa9.25□□□□□ -0.93
PRDM1-206ENST00000481163 SPATA31A5Q5VU36 1347 aa9.25□□□□□ -0.93
PRDM1-206ENST00000481163 SPATA31A7Q8IWB4 1347 aa9.25□□□□□ -0.93
PRDM1-206ENST00000481163 SLIT3O75094 1523 aa9.25□□□□□ -0.93
PRDM1-206ENST00000481163 ANKRD36BQ8N2N9 1353 aa9.24□□□□□ -0.93
PRDM1-206ENST00000481163 NINLQ9Y2I6 1382 aa9.24□□□□□ -0.93
PRDM1-206ENST00000481163 CDK12Q9NYV4 1490 aaPredicted RBP9.24□□□□□ -0.93
PRDM1-206ENST00000481163 ARHGEF25Q86VW2 580 aa9.24□□□□□ -0.93
PRDM1-206ENST00000481163 UPF1Q92900 1129 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRDM1-206ENST00000481163 CARD14Q9BXL6 1004 aa9.24□□□□□ -0.93
PRDM1-206ENST00000481163 COL18A1P39060 1754 aa9.24□□□□□ -0.93
PRDM1-206ENST00000481163 CPDO75976 1380 aa9.24□□□□□ -0.93
PRDM1-206ENST00000481163 NSD3Q9BZ95 1437 aa9.23□□□□□ -0.93
PRDM1-206ENST00000481163 LMO7Q8WWI1 1683 aa9.23□□□□□ -0.93
PRDM1-206ENST00000481163 FYB1O15117 783 aa9.23□□□□□ -0.93
PRDM1-206ENST00000481163 TNNT2P45379 298 aaPredicted RBP9.23□□□□□ -0.93
PRDM1-206ENST00000481163 AMPHP49418 695 aa9.23□□□□□ -0.93
PRDM1-206ENST00000481163 KRT27Q7Z3Y8 459 aa9.23□□□□□ -0.93
PRDM1-206ENST00000481163 PANK3Q9H999 370 aa9.23□□□□□ -0.93
PRDM1-206ENST00000481163 MAP2P11137 1827 aaKnown RBP9.23□□□□□ -0.93
PRDM1-206ENST00000481163 SPATA31A1Q5TZJ5 1347 aa9.23□□□□□ -0.93
PRDM1-206ENST00000481163 RGPD2P0DJD1 1756 aa9.22□□□□□ -0.93
PRDM1-206ENST00000481163 PPM1GO15355 546 aaPredicted RBP9.22□□□□□ -0.93
PRDM1-206ENST00000481163 RRS1Q15050 365 aaKnown RBP9.22□□□□□ -0.93
PRDM1-206ENST00000481163 NLRP2Q9NX02 1062 aa9.22□□□□□ -0.93
PRDM1-206ENST00000481163 AATKQ6ZMQ8 1374 aa9.22□□□□□ -0.93
PRDM1-206ENST00000481163 USP31Q70CQ4 1352 aa9.22□□□□□ -0.93
PRDM1-206ENST00000481163 NFAT5O94916 1531 aa9.21□□□□□ -0.93
PRDM1-206ENST00000481163 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.94
PRDM1-206ENST00000481163 TCP11L2Q8N4U5 519 aa9.21□□□□□ -0.94
PRDM1-206ENST00000481163 ANKRD24Q8TF21 1146 aa9.21□□□□□ -0.94
PRDM1-206ENST00000481163 COL5A2P05997 1499 aaPredicted RBP9.21□□□□□ -0.94
PRDM1-206ENST00000481163 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
PRDM1-206ENST00000481163 PDE3BQ13370 1112 aa9.2□□□□□ -0.94
PRDM1-206ENST00000481163 KIF7Q2M1P5 1343 aa9.2□□□□□ -0.94
PRDM1-206ENST00000481163 ONECUT3O60422 494 aaPredicted RBP9.19□□□□□ -0.94
PRDM1-206ENST00000481163 SF3B2Q13435 895 aaKnown RBP9.19□□□□□ -0.94
PRDM1-206ENST00000481163 CGNL1Q0VF96 1302 aa9.19□□□□□ -0.94
PRDM1-206ENST00000481163 WDR17Q8IZU2 1322 aa9.19□□□□□ -0.94
PRDM1-206ENST00000481163 OVOS2A0A0J9YW53 1432 aa9.19□□□□□ -0.94
PRDM1-206ENST00000481163 CRB1P82279 1406 aa9.19□□□□□ -0.94
PRDM1-206ENST00000481163 OVOS2Q6IE36 1432 aa9.19□□□□□ -0.94
PRDM1-206ENST00000481163 HOXC9P31274 260 aa9.18□□□□□ -0.94
PRDM1-206ENST00000481163 MAP3K19Q56UN5 1328 aa9.18□□□□□ -0.94
PRDM1-206ENST00000481163 IP6K1Q92551 441 aa9.18□□□□□ -0.94
PRDM1-206ENST00000481163 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
PRDM1-206ENST00000481163 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
PRDM1-206ENST00000481163 DDB1Q16531 1140 aa9.17□□□□□ -0.94
PRDM1-206ENST00000481163 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
PRDM1-206ENST00000481163 USHBP1Q8N6Y0 703 aa9.17□□□□□ -0.94
PRDM1-206ENST00000481163 THRAP3Q9Y2W1 955 aaKnown RBP9.17□□□□□ -0.94
PRDM1-206ENST00000481163 EMILIN1Q9Y6C2 1016 aa9.17□□□□□ -0.94
PRDM1-206ENST00000481163 WNK3Q9BYP7 1800 aa9.17□□□□□ -0.94
PRDM1-206ENST00000481163 ANKRD26Q9UPS8 1709 aa9.17□□□□□ -0.94
PRDM1-206ENST00000481163 THSD7AQ9UPZ6 1657 aa9.16□□□□□ -0.94
PRDM1-206ENST00000481163 TRIM37O94972 964 aa9.16□□□□□ -0.94
PRDM1-206ENST00000481163 HSP90AB2PQ58FF8 381 aa9.16□□□□□ -0.94
PRDM1-206ENST00000481163 DEFB132Q7Z7B7 95 aa9.16□□□□□ -0.94
PRDM1-206ENST00000481163 MORC1Q86VD1 984 aa9.16□□□□□ -0.94
PRDM1-206ENST00000481163 CARD10Q9BWT7 1032 aa9.16□□□□□ -0.94
PRDM1-206ENST00000481163 ERBB3P21860 1342 aa9.15□□□□□ -0.94
PRDM1-206ENST00000481163 WASHC2AQ641Q2 1341 aa9.15□□□□□ -0.94
PRDM1-206ENST00000481163 EXOC5O00471 708 aa9.15□□□□□ -0.94
PRDM1-206ENST00000481163 CC2D1BQ5T0F9 858 aaKnown RBP9.15□□□□□ -0.94
PRDM1-206ENST00000481163 PEAK1Q9H792 1746 aa9.14□□□□□ -0.95
PRDM1-206ENST00000481163 PARP4Q9UKK3 1724 aaKnown RBP9.14□□□□□ -0.95
PRDM1-206ENST00000481163 CCDC7Q96M83 1385 aa9.14□□□□□ -0.95
PRDM1-206ENST00000481163 IL2RBP14784 551 aa9.14□□□□□ -0.95
PRDM1-206ENST00000481163 FAM196AQ6ZSG2 479 aa9.14□□□□□ -0.95
PRDM1-206ENST00000481163 EP400Q96L91 3159 aa9.14□□□□□ -0.95
PRDM1-206ENST00000481163 SBF2Q86WG5 1849 aa9.13□□□□□ -0.95
PRDM1-206ENST00000481163 APBA3O96018 575 aa9.13□□□□□ -0.95
PRDM1-206ENST00000481163 EN1Q05925 392 aaPredicted RBP9.13□□□□□ -0.95
PRDM1-206ENST00000481163 NBPF6Q5VWK0 638 aa9.13□□□□□ -0.95
PRDM1-206ENST00000481163 DDX54Q8TDD1 881 aaKnown RBP9.13□□□□□ -0.95
PRDM1-206ENST00000481163 ACSBG1Q96GR2 724 aa9.13□□□□□ -0.95
PRDM1-206ENST00000481163 NBPF4Q96M43 638 aa9.13□□□□□ -0.95
PRDM1-206ENST00000481163 RGPD1P0DJD0 1748 aa9.13□□□□□ -0.95
PRDM1-206ENST00000481163 BLMP54132 1417 aaPredicted RBP9.13□□□□□ -0.95
PRDM1-206ENST00000481163 LRRC37A3O60309 1634 aa9.13□□□□□ -0.95
PRDM1-206ENST00000481163 BAG6P46379 1132 aa9.12□□□□□ -0.95
PRDM1-206ENST00000481163 CCDC125Q86Z20 511 aa9.12□□□□□ -0.95
PRDM1-206ENST00000481163 MARCH10Q8NA82 808 aaPredicted RBP9.12□□□□□ -0.95
PRDM1-206ENST00000481163 CDCA7Q9BWT1 371 aaPredicted RBP9.12□□□□□ -0.95
PRDM1-206ENST00000481163 POLKQ9UBT6 870 aa9.12□□□□□ -0.95
PRDM1-206ENST00000481163 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
PRDM1-206ENST00000481163 SMG6Q86US8 1419 aaKnown RBP9.12□□□□□ -0.95
PRDM1-206ENST00000481163 ABCC6O95255 1503 aa9.11□□□□□ -0.95
PRDM1-206ENST00000481163 FLT4P35916 1363 aa9.11□□□□□ -0.95
PRDM1-206ENST00000481163 TATP17735 454 aaPredicted RBP9.1□□□□□ -0.95
PRDM1-206ENST00000481163 EZH2Q15910 746 aaKnown RBP9.1□□□□□ -0.95
PRDM1-206ENST00000481163 PTF1AQ7RTS3 328 aa9.1□□□□□ -0.95
PRDM1-206ENST00000481163 RAPGEF4Q8WZA2 1011 aa9.1□□□□□ -0.95
PRDM1-206ENST00000481163 TNS1Q9HBL0 1735 aaKnown RBP9.1□□□□□ -0.95
PRDM1-206ENST00000481163 RTL1A6NKG5 1358 aa9.1□□□□□ -0.95
PRDM1-206ENST00000481163 INSRP06213 1382 aa9.1□□□□□ -0.95
PRDM1-206ENST00000481163 OVOS2A0A0G2JMS6 1433 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms