RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 TRIM47Q96LD4 638 aa9.01□□□□□ -0.97
CHCHD3-205ENST00000481152 SNRKQ9NRH2 765 aa9.01□□□□□ -0.97
CHCHD3-205ENST00000481152 CDV3Q9UKY7 258 aaKnown RBP9.01□□□□□ -0.97
CHCHD3-205ENST00000481152 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
CHCHD3-205ENST00000481152 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
CHCHD3-205ENST00000481152 CCDC116Q8IYX3 515 aa8.99□□□□□ -0.97
CHCHD3-205ENST00000481152 KIFC2Q96AC6 838 aa8.99□□□□□ -0.97
CHCHD3-205ENST00000481152 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
CHCHD3-205ENST00000481152 KCTD15Q96SI1 283 aaPredicted RBP8.99□□□□□ -0.97
CHCHD3-205ENST00000481152 APBB1O00213 710 aa8.98□□□□□ -0.97
CHCHD3-205ENST00000481152 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
CHCHD3-205ENST00000481152 EMILIN1Q9Y6C2 1016 aa8.98□□□□□ -0.97
CHCHD3-205ENST00000481152 ZBBXA8MT70 800 aa8.97□□□□□ -0.97
CHCHD3-205ENST00000481152 NBPF20Q3BBV1 942 aa8.97□□□□□ -0.97
CHCHD3-205ENST00000481152 DZIP3Q86Y13 1208 aaKnown RBP8.97□□□□□ -0.97
CHCHD3-205ENST00000481152 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
CHCHD3-205ENST00000481152 GPR37L1O60883 481 aa8.96□□□□□ -0.98
CHCHD3-205ENST00000481152 FBXO45P0C2W1 286 aa8.96□□□□□ -0.98
CHCHD3-205ENST00000481152 INTS6LQ5JSJ4 861 aaKnown RBP8.96□□□□□ -0.98
CHCHD3-205ENST00000481152 PPP1R26Q5T8A7 1209 aaPredicted RBP8.96□□□□□ -0.98
CHCHD3-205ENST00000481152 SCARF1Q14162 830 aa8.95□□□□□ -0.98
CHCHD3-205ENST00000481152 ZFP42Q96MM3 310 aa8.95□□□□□ -0.98
CHCHD3-205ENST00000481152 DHX9Q08211 1270 aaKnown RBP8.94□□□□□ -0.98
CHCHD3-205ENST00000481152 MEIOBQ8N635 442 aa8.94□□□□□ -0.98
CHCHD3-205ENST00000481152 PURBQ96QR8 312 aaKnown RBP8.94□□□□□ -0.98
CHCHD3-205ENST00000481152 PGPEP1Q9NXJ5 209 aa8.94□□□□□ -0.98
CHCHD3-205ENST00000481152 NR1H3Q13133 447 aa8.92□□□□□ -0.98
CHCHD3-205ENST00000481152 PCDHB9Q9Y5E1 797 aa8.92□□□□□ -0.98
CHCHD3-205ENST00000481152 ESPNB1AK53 854 aa8.91□□□□□ -0.98
CHCHD3-205ENST00000481152 C6orf118Q5T5N4 469 aa8.91□□□□□ -0.98
CHCHD3-205ENST00000481152 LINC00528Q8N1L1 170 aa8.91□□□□□ -0.98
CHCHD3-205ENST00000481152 TBC1D2BQ9UPU7 963 aa8.91□□□□□ -0.98
CHCHD3-205ENST00000481152 UPP2O95045 317 aa8.9□□□□□ -0.98
CHCHD3-205ENST00000481152 RAB15P59190 212 aa8.9□□□□□ -0.98
CHCHD3-205ENST00000481152 CBLBQ13191 982 aa8.89□□□□□ -0.99
CHCHD3-205ENST00000481152 ERVH48-1M5A8F1 160 aa8.88□□□□□ -0.99
CHCHD3-205ENST00000481152 BMP2P12643 396 aa8.88□□□□□ -0.99
CHCHD3-205ENST00000481152 Q6ZVU0 165 aa8.88□□□□□ -0.99
CHCHD3-205ENST00000481152 SEPT12Q8IYM1 358 aa8.88□□□□□ -0.99
CHCHD3-205ENST00000481152 TSEN34Q9BSV6 310 aaKnown RBP8.88□□□□□ -0.99
CHCHD3-205ENST00000481152 PRM3Q9NNZ6 103 aa8.88□□□□□ -0.99
CHCHD3-205ENST00000481152 TMPRSS4Q9NRS4 437 aa8.88□□□□□ -0.99
CHCHD3-205ENST00000481152 MCM6Q14566 821 aa8.87□□□□□ -0.99
CHCHD3-205ENST00000481152 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
CHCHD3-205ENST00000481152 ZNF330Q9Y3S2 320 aaPredicted RBP8.87□□□□□ -0.99
CHCHD3-205ENST00000481152 GIGYF1O75420 1035 aaPredicted RBP8.86□□□□□ -0.99
CHCHD3-205ENST00000481152 MCCD1P59942 119 aaPredicted RBP8.86□□□□□ -0.99
CHCHD3-205ENST00000481152 TREML4Q6UXN2 200 aa8.86□□□□□ -0.99
CHCHD3-205ENST00000481152 ZNF592Q92610 1267 aa8.86□□□□□ -0.99
CHCHD3-205ENST00000481152 SOBPA7XYQ1 873 aa8.85□□□□□ -0.99
CHCHD3-205ENST00000481152 NFX1Q12986 1120 aaKnown RBP8.85□□□□□ -0.99
CHCHD3-205ENST00000481152 IRF5Q13568 498 aa8.85□□□□□ -0.99
CHCHD3-205ENST00000481152 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
CHCHD3-205ENST00000481152 TERTO14746 1132 aaKnown RBP8.84□□□□□ -0.99
CHCHD3-205ENST00000481152 MAN1A2O60476 641 aa8.84□□□□□ -0.99
CHCHD3-205ENST00000481152 LILRA1O75019 489 aa8.84□□□□□ -0.99
CHCHD3-205ENST00000481152 GDPD2Q9HCC8 539 aa8.84□□□□□ -0.99
CHCHD3-205ENST00000481152 SOS2Q07890 1332 aaPredicted RBP8.83□□□□□ -1
CHCHD3-205ENST00000481152 WFS1O76024 890 aa8.83□□□□□ -1
CHCHD3-205ENST00000481152 HOMEZQ8IX15 550 aa8.83□□□□□ -1
CHCHD3-205ENST00000481152 AGBL1Q96MI9 1066 aa8.83□□□□□ -1
CHCHD3-205ENST00000481152 CYLDQ9NQC7 956 aa8.83□□□□□ -1
CHCHD3-205ENST00000481152 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
CHCHD3-205ENST00000481152 SPINT1O43278 529 aa8.82□□□□□ -1
CHCHD3-205ENST00000481152 ADH1AP07327 375 aa8.82□□□□□ -1
CHCHD3-205ENST00000481152 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
CHCHD3-205ENST00000481152 RELBQ01201 579 aa8.82□□□□□ -1
CHCHD3-205ENST00000481152 RNF20Q5VTR2 975 aa8.82□□□□□ -1
CHCHD3-205ENST00000481152 CCDC125Q86Z20 511 aa8.82□□□□□ -1
CHCHD3-205ENST00000481152 ABL2P42684 1182 aa8.81□□□□□ -1
CHCHD3-205ENST00000481152 DNMT3LQ9UJW3 386 aa8.81□□□□□ -1
CHCHD3-205ENST00000481152 TTLL8A6PVC2 850 aa8.8□□□□□ -1
CHCHD3-205ENST00000481152 TMEM132AQ24JP5 1023 aa8.8□□□□□ -1
CHCHD3-205ENST00000481152 TRIM52Q96A61 297 aa8.8□□□□□ -1
CHCHD3-205ENST00000481152 EIF4G2P78344 907 aaKnown RBP eCLIP8.79□□□□□ -12e-10■■■■□ 24.2
CHCHD3-205ENST00000481152 NPAS3Q8IXF0 933 aa8.79□□□□□ -1
CHCHD3-205ENST00000481152 VAC14Q08AM6 782 aa8.78□□□□□ -1
CHCHD3-205ENST00000481152 LCE2CQ5TA81 110 aa8.78□□□□□ -1
CHCHD3-205ENST00000481152 KDF1Q8NAX2 398 aaPredicted RBP8.78□□□□□ -1
CHCHD3-205ENST00000481152 INSM2Q96T92 566 aaPredicted RBP8.78□□□□□ -1
CHCHD3-205ENST00000481152 ZNF395Q9H8N7 513 aaPredicted RBP8.78□□□□□ -1
CHCHD3-205ENST00000481152 CEP126Q9P2H0 1117 aa8.78□□□□□ -1
CHCHD3-205ENST00000481152 COG6Q9Y2V7 657 aa8.78□□□□□ -1
CHCHD3-205ENST00000481152 PCDHB11Q9Y5F2 797 aa8.78□□□□□ -1
CHCHD3-205ENST00000481152 GTF3C3Q9Y5Q9 886 aa8.78□□□□□ -1
CHCHD3-205ENST00000481152 PTGIRP43119 386 aa8.77□□□□□ -1.01
CHCHD3-205ENST00000481152 CTSOP43234 321 aaPredicted RBP8.77□□□□□ -1.01
CHCHD3-205ENST00000481152 VEGFBP49765 207 aa8.77□□□□□ -1.01
CHCHD3-205ENST00000481152 ERVK-9P63128 1117 aa8.77□□□□□ -1.01
CHCHD3-205ENST00000481152 H3BM21 787 aa8.76□□□□□ -1.01
CHCHD3-205ENST00000481152 WASHC4Q2M389 1173 aa8.76□□□□□ -1.01
CHCHD3-205ENST00000481152 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.76□□□□□ -1.016e-7■□□□□ 11.1
CHCHD3-205ENST00000481152 CC2D2BQ6DHV5 1058 aa8.76□□□□□ -1.01
CHCHD3-205ENST00000481152 SLC16A10Q8TF71 515 aa8.76□□□□□ -1.01
CHCHD3-205ENST00000481152 POLMQ9NP87 494 aaPredicted RBP8.76□□□□□ -1.01
CHCHD3-205ENST00000481152 FIGNL2A6NMB9 653 aa8.75□□□□□ -1.01
CHCHD3-205ENST00000481152 SCTRP47872 440 aa8.75□□□□□ -1.01
CHCHD3-205ENST00000481152 FLIIQ13045 1269 aa8.75□□□□□ -1.01
CHCHD3-205ENST00000481152 ERICH6Q7L0X2 663 aa8.75□□□□□ -1.01
CHCHD3-205ENST00000481152 ATP5J2-PTCD1G3V325 749 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms